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HG10016698 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016698
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:7238242..7238550
RNA-Seq ExpressionHG10016698
SyntenyHG10016698
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647506.1 hypothetical protein Csa_003725 [Cucumis sativus]1.5e-2262.26Show/hide
Query:  MPNRETPNLNSPAMPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHN--PET--AVSPPIDSGSSRIGGDDGGVAFTFASGPS
        MP+ E PNL SP M + RISS  LII L+A+PR FL +DCRPLRPGS I+RH VH+ ++   HN  PET  A + PIDSG+  IG + GGVAFT ASGPS
Subjt:  MPNRETPNLNSPAMPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHN--PET--AVSPPIDSGSSRIGGDDGGVAFTFASGPS

Query:  RKGAGH
        RKGAGH
Subjt:  RKGAGH

KAG6595007.1 hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sororia]9.3e-1251.69Show/hide
Query:  MPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHNPETAVSPPIDSGSSRIGGDDGGVAFTFASGPSRKGAGH
        M +++ SSL LI+ L+A+    LL+D RPLR GST + HP++N SA+A      A SP  DS   + GG  GGV FT  SGPSRKGAGH
Subjt:  MPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHNPETAVSPPIDSGSSRIGGDDGGVAFTFASGPSRKGAGH

KAG6604156.1 hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1763.16Show/hide
Query:  NLNSPAMPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHNPETAVSPPIDSGSSRIGGDDGGVAFTFASGPSRKGAGH
        NLNSPAMP ++ SSL LI++LMA+ R   L+DCRPLR GSTIE    +N SAI+  + E A S P DSGS   G  DGGVAFT ASGPSRKGAGH
Subjt:  NLNSPAMPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHNPETAVSPPIDSGSSRIGGDDGGVAFTFASGPSRKGAGH

TYK12856.1 hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa]1.0e-2670.19Show/hide
Query:  MPNRETPNLNSPAMPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHNPET--AVSPPIDSGSSRIGGDDGGVAFTFASGPSRK
        M   E PNLNSPAMP+ RISS  LIILLMA+PR FL +DCRPLRPGS I+RH VHNASAI    PET  A +  IDSG  RIG + GGVAFT ASGPSRK
Subjt:  MPNRETPNLNSPAMPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHNPET--AVSPPIDSGSSRIGGDDGGVAFTFASGPSRK

Query:  GAGH
        GAGH
Subjt:  GAGH

TrEMBL top hitse value%identityAlignment
A0A5D3CR30 Uncharacterized protein5.0e-2770.19Show/hide
Query:  MPNRETPNLNSPAMPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHNPET--AVSPPIDSGSSRIGGDDGGVAFTFASGPSRK
        M   E PNLNSPAMP+ RISS  LIILLMA+PR FL +DCRPLRPGS I+RH VHNASAI    PET  A +  IDSG  RIG + GGVAFT ASGPSRK
Subjt:  MPNRETPNLNSPAMPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHNPET--AVSPPIDSGSSRIGGDDGGVAFTFASGPSRK

Query:  GAGH
        GAGH
Subjt:  GAGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAACAGAGAAACGCCGAATCTAAATTCGCCGGCGATGCCCAGCCTCAGGATCTCCTCTTTATTTCTAATCATCCTGCTAATGGCCTCCCCACGGTTATTTCTTCT
TCTAGATTGCAGACCGCTCCGGCCCGGTTCAACAATCGAGCGCCACCCTGTTCATAATGCCTCGGCTATTGCCGCCCACAACCCGGAAACAGCTGTATCGCCGCCGATAG
ATTCCGGTAGCAGCCGGATCGGAGGCGACGACGGCGGCGTAGCTTTTACTTTTGCTTCGGGGCCCAGCAGAAAGGGTGCTGGCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAACAGAGAAACGCCGAATCTAAATTCGCCGGCGATGCCCAGCCTCAGGATCTCCTCTTTATTTCTAATCATCCTGCTAATGGCCTCCCCACGGTTATTTCTTCT
TCTAGATTGCAGACCGCTCCGGCCCGGTTCAACAATCGAGCGCCACCCTGTTCATAATGCCTCGGCTATTGCCGCCCACAACCCGGAAACAGCTGTATCGCCGCCGATAG
ATTCCGGTAGCAGCCGGATCGGAGGCGACGACGGCGGCGTAGCTTTTACTTTTGCTTCGGGGCCCAGCAGAAAGGGTGCTGGCCATTAA
Protein sequenceShow/hide protein sequence
MPNRETPNLNSPAMPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHNPETAVSPPIDSGSSRIGGDDGGVAFTFASGPSRKGAGH