; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016766 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016766
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncyclin-H1-1
Genome locationChr03:7860934..7869548
RNA-Seq ExpressionHG10016766
SyntenyHG10016766
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0070985 - transcription factor TFIIK complex (cellular component)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
InterPro domainsIPR036915 - Cyclin-like superfamily
IPR043198 - Cyclin/Cyclin-like subunit Ssn8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12918.1 cyclin-H1-1 isoform X1 [Cucumis melo var. makuwa]6.6e-7266.96Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWILSPQ+L  RYKAANQRAIEAL+KFGA+LMEVDADGSLSYPDPQ+N KD+ADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM
        KI                                                                 QSLEFDLIVYAPYRSVEGY+NDIEELFHENAEM
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM

Query:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA
        LQMLK TASLEVDKIMLTDAPLLFPPGQ+A
Subjt:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA

XP_004141934.1 cyclin-H1-1 isoform X1 [Cucumis sativus]7.3e-7166.52Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWILSPQ+L  RY AANQRAIEAL+KFGA LMEVDADGSLSYPDPQ+NSKD+ADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM
        KI                                                                 QSLEFDLIVYAPYRSVEGY+NDIEELF+ENAEM
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM

Query:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA
        LQMLK TASLEVDKIMLTDAPLLFPPGQ+A
Subjt:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA

XP_008440225.1 PREDICTED: cyclin-H1-1 isoform X1 [Cucumis melo]1.5e-7166.52Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWILSPQ+L  RYKAANQRAIEAL+KFGA+LMEVDADGSLSYPDPQ+N KD+ADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM
        KI                                                                 QSLEFDLIVYAPYRSVEGY+NDIEELFHENAEM
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM

Query:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA
        LQMLK TASL+VDKIMLTDAPLLFPPGQ+A
Subjt:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA

XP_031744087.1 cyclin-H1-1 isoform X2 [Cucumis sativus]7.3e-7166.52Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWILSPQ+L  RY AANQRAIEAL+KFGA LMEVDADGSLSYPDPQ+NSKD+ADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM
        KI                                                                 QSLEFDLIVYAPYRSVEGY+NDIEELF+ENAEM
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM

Query:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA
        LQMLK TASLEVDKIMLTDAPLLFPPGQ+A
Subjt:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA

XP_038883649.1 cyclin-H1-1 isoform X1 [Benincasa hispida]1.6e-7367.83Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWILSPQ+LV RYKAANQRAIEAL+KFGATLMEVDADGSLSYP+PQ+NSKDNADKHSRPKSLSIEE+QFMRVFYENKLQEVCNNFHFPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM
        KI                                                                 QSLEFDLIVYAPYRSVEGY+NDIEELFHENAEM
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM

Query:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA
        LQMLK TASLEVDKIMLTDAPLLFPPGQ+A
Subjt:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA

TrEMBL top hitse value%identityAlignment
A0A0A0KJE5 CYCLIN domain-containing protein3.5e-7166.52Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWILSPQ+L  RY AANQRAIEAL+KFGA LMEVDADGSLSYPDPQ+NSKD+ADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM
        KI                                                                 QSLEFDLIVYAPYRSVEGY+NDIEELF+ENAEM
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM

Query:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA
        LQMLK TASLEVDKIMLTDAPLLFPPGQ+A
Subjt:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA

A0A1S3B075 cyclin-H1-1 isoform X17.1e-7266.52Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWILSPQ+L  RYKAANQRAIEAL+KFGA+LMEVDADGSLSYPDPQ+N KD+ADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM
        KI                                                                 QSLEFDLIVYAPYRSVEGY+NDIEELFHENAEM
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM

Query:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA
        LQMLK TASL+VDKIMLTDAPLLFPPGQ+A
Subjt:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA

A0A5D3CP29 Cyclin-H1-1 isoform X13.2e-7266.96Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWILSPQ+L  RYKAANQRAIEAL+KFGA+LMEVDADGSLSYPDPQ+N KD+ADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM
        KI                                                                 QSLEFDLIVYAPYRSVEGY+NDIEELFHENAEM
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM

Query:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA
        LQMLK TASLEVDKIMLTDAPLLFPPGQ+A
Subjt:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA

A0A6J1BV31 cyclin-H1-14.6e-7165.65Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWIL+PQ+LV RY+AANQ AI AL+KFGATLMEVDADGSLSYPDPQ+NSKD+ADKHSRPK+LSIEEEQFMRVFYENKLQEVCNNFHFPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM
        KI                                                                 QSLEFDLIVYAPYRSVEGYIND+E+LFHENAEM
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM

Query:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA
        LQ+LKETASLEVDKIMLTDAPLLFPPGQ+A
Subjt:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA

A0A6J1HF25 cyclin-H1-11.1e-6964.78Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWILSP +LV RYKAANQRAIEAL+KFGATLM VDADGSLSYPDP +NSK+NADKHSRPK LSIEEEQFMRVFYENKLQEVCNNFHFPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM
        KI                                                                 QSLEFDLIVYAPYRSVEGY++D+EE+FHENAE 
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFHENAEM

Query:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA
        LQMLKETASLEVDKIMLTD PLLFPPGQ+A
Subjt:  LQMLKETASLEVDKIMLTDAPLLFPPGQVA

SwissProt top hitse value%identityAlignment
Q10D80 Cyclin-H1-11.3e-3541.03Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVD-ADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFP
        MADF+TST R +WI    DL+ R+ AANQRA E L ++G T ++VD  DGSLSYP+P   + D+    S  K LS EEE+ MRVFYE K+QEVC+ F FP
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVD-ADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFP

Query:  HKIQ-----------------------------------------------------------------SLEFDLIVYAPYRSVEGYINDIEELF---HE
        HKIQ                                                                 SL+FDLIVYAPYRS+EG+++D+E+     + 
Subjt:  HKIQ-----------------------------------------------------------------SLEFDLIVYAPYRSVEGYINDIEELF---HE

Query:  NAEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA
          + LQ L++TA  +VDK+MLTDAPLL+ PGQ+A
Subjt:  NAEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA

Q3ZBL9 Cyclin-H4.2e-0542.42Show/hide
Query:  IQSLEFDLIVYAPYRSVEGYINDIEELFH--ENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA
        IQ L F LIV+ PYR  EG++ D++  +   EN E   +L++TA   ++++ LTDA LL+ P Q+A
Subjt:  IQSLEFDLIVYAPYRSVEGYINDIEELFH--ENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA

Q61458 Cyclin-H3.2e-0543.75Show/hide
Query:  IQSLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA
        IQ L F LIV+ PYR  EG++ DI+  +    E  ++L++TA   + +I LTDA LL+ P Q+A
Subjt:  IQSLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA

Q8W5S1 Cyclin-H1-13.5e-4445.06Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWI +PQ L  RYKAANQRA++ L+K G T +EVDA GSL+YP  ++ S D ADK  +P  LS +EE+FMR FYE K+QEVC+ F FPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFH---EN
        KI                                                                 QSLEFDLIVYAPYR++EG++N++EE      + 
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFH---EN

Query:  AEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA
         + L+ L + A+ E DK+MLTDAPLLFPPGQ+A
Subjt:  AEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA

Q9R1A0 Cyclin-H3.2e-0543.75Show/hide
Query:  IQSLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA
        IQ L F LIV+ PYR  EG++ DI+  +    E  ++L++TA   + +I LTDA LL+ P Q+A
Subjt:  IQSLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA

Arabidopsis top hitse value%identityAlignment
AT5G27620.1 cyclin H;12.5e-4545.06Show/hide
Query:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH
        MADFQTSTQRAKWI +PQ L  RYKAANQRA++ L+K G T +EVDA GSL+YP  ++ S D ADK  +P  LS +EE+FMR FYE K+QEVC+ F FPH
Subjt:  MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPH

Query:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFH---EN
        KI                                                                 QSLEFDLIVYAPYR++EG++N++EE      + 
Subjt:  KI-----------------------------------------------------------------QSLEFDLIVYAPYRSVEGYINDIEELFH---EN

Query:  AEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA
         + L+ L + A+ E DK+MLTDAPLLFPPGQ+A
Subjt:  AEMLQMLKETASLEVDKIMLTDAPLLFPPGQVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGTCTCCTCAGGATCTGGTTTACAGGTACAAAGCTGCTAACCAGAGAGCAATAGAAGCTCTGGATAA
GTTTGGAGCAACACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCAGACCCTCAGATGAATTCAAAAGATAATGCTGACAAACATTCTCGCCCCAAATCGTTGA
GTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGAGTTTGGAATTTGATCTTATT
GTTTATGCACCTTACCGATCAGTTGAAGGCTATATAAATGATATTGAGGAACTCTTCCATGAGAATGCTGAAATGCTTCAAATGCTGAAGGAAACAGCATCATTAGAGGT
TGATAAAATTATGTTAACGGATGCCCCACTTCTCTTCCCCCCTGGGCAGGTAGCTCAGCCTTGGCGTTGGGTAATGAGTTTGGTATATGAAACCAACATCCTTGAGCCGC
GTTCAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGTCTCCTCAGGATCTGGTTTACAGGTACAAAGCTGCTAACCAGAGAGCAATAGAAGCTCTGGATAA
GTTTGGAGCAACACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCAGACCCTCAGATGAATTCAAAAGATAATGCTGACAAACATTCTCGCCCCAAATCGTTGA
GTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGAGTTTGGAATTTGATCTTATT
GTTTATGCACCTTACCGATCAGTTGAAGGCTATATAAATGATATTGAGGAACTCTTCCATGAGAATGCTGAAATGCTTCAAATGCTGAAGGAAACAGCATCATTAGAGGT
TGATAAAATTATGTTAACGGATGCCCCACTTCTCTTCCCCCCTGGGCAGGTAGCTCAGCCTTGGCGTTGGGTAATGAGTTTGGTATATGAAACCAACATCCTTGAGCCGC
GTTCAACATGA
Protein sequenceShow/hide protein sequence
MADFQTSTQRAKWILSPQDLVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQSLEFDLI
VYAPYRSVEGYINDIEELFHENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQVAQPWRWVMSLVYETNILEPRST