CuGenDBv2

Gene ID	HG10016787
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transmembrane protein 220
Genome location	Chr03:8079108..8080303
RNA-Seq Expression	HG10016787
Synteny	HG10016787
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029377 - TMEM220 protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004141949.1 transmembrane protein 220 isoform X2 [Cucumis sativus]

4.0e-64

85.03

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS+CS+LMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVN L WNVSLEA+N VAKA MG+GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPNIHRT--TKSKREFPRYLTYGKASI
        TGSGLV+CS+ILHL AASSSSP + RT  +KSKR FPR+LTYG A +
Subjt:  TGSGLVLCSVILHLRAASSSSPNIHRT--TKSKREFPRYLTYGKASI

XP_008440175.1 PREDICTED: transmembrane protein 220 [Cucumis melo]

5.2e-64

84.83

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYS+CS+LMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVN L WNVSLEA+N VAKA MG+GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASI
        TGSGLV+CS+ILHL AASSSSP +  T+KSKR FPR+LTYG A +
Subjt:  TGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASI

XP_031742851.1 transmembrane protein 220 isoform X1 [Cucumis sativus]

8.0e-65

86.9

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS+CS+LMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVN L WNVSLEA+N VAKA MG+GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPNIHRT--TKSKREFPRYLTYGKA
        TGSGLV+CS+ILHL AASSSSP + RT  +KSKR FPR+LTYGKA
Subjt:  TGSGLVLCSVILHLRAASSSSPNIHRT--TKSKREFPRYLTYGKA

XP_038881309.1 transmembrane protein 220 isoform X1 [Benincasa hispida]

1.8e-64

86.99

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVN L W VS+EA+  VAKATMG GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPN---IHRTTKSKREFPRYLTYGKA
        TGSGLV+CS+ILHL AASSSS +   IHRT+KSKREFPRYLTYG A
Subjt:  TGSGLVLCSVILHLRAASSSSPN---IHRTTKSKREFPRYLTYGKA

XP_038881310.1 transmembrane protein 220 isoform X2 [Benincasa hispida]

2.3e-64

86.99

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVN L W VS+EA+  VAKATMG GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPN---IHRTTKSKREFPRYLTYGKA
        TGSGLV+CS+ILHL AASSSS +   IHRT+KSKREFPRYLTYG A
Subjt:  TGSGLVLCSVILHLRAASSSSPN---IHRTTKSKREFPRYLTYGKA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KI28 Uncharacterized protein

1.9e-64

85.03

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS+CS+LMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVN L WNVSLEA+N VAKA MG+GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPNIHRT--TKSKREFPRYLTYGKASI
        TGSGLV+CS+ILHL AASSSSP + RT  +KSKR FPR+LTYG A +
Subjt:  TGSGLVLCSVILHLRAASSSSPNIHRT--TKSKREFPRYLTYGKASI

A0A1S3B186 transmembrane protein 220

2.5e-64

84.83

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYS+CS+LMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVN L WNVSLEA+N VAKA MG+GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASI
        TGSGLV+CS+ILHL AASSSSP +  T+KSKR FPR+LTYG A +
Subjt:  TGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASI

A0A5D3CNK6 Transmembrane protein 220

2.5e-64

84.83

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYS+CS+LMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVN L WNVSLEA+N VAKA MG+GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASI
        TGSGLV+CS+ILHL AASSSSP +  T+KSKR FPR+LTYG A +
Subjt:  TGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASI

A0A6J1BUR8 transmembrane protein 220

3.3e-56

78.62

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS+CSLLM FLFAYSTAVQFNDPDWYLWVPLYGCACAVN  NW +S E I  VAKAT+GLGI LWVKVVAEDY+NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASI
        TGSGLV+ S+IL L  A S SP +HRT+KS R FPRYL  G A++
Subjt:  TGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASI

A0A6J1HG20 uncharacterized protein LOC111463236

8.6e-57

77.24

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLM FLFAYSTAVQFNDPDWYLW+PLYGCACAVN LNW+VSL+ +  +AKAT+GLGICLWVKVVAED++NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASI
        TGSGLV+ S++LHL A SSSS    RT K +R F RY++YG AS+
Subjt:  TGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G23755.1 unknown protein

9.5e-32

54.03

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Query:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA P  L+  CSLLM FLFAYS +VQ NDPDWY W PLY  AC VN +N+   ++ +  + +  + LG+ L VKV+AED +    G LSLDL+ RVVREK
Subjt:  MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVLCSVILHLRAASSSSPNI
         GSGLV+ S++L L+A+SSSS  I
Subjt:  TGSGLVLCSVILHLRAASSSSPNI

Sequences

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CDS sequence

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ATGGCAACACCCTCCAAATTATACAGCACCTGCTCTCTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTATGGGTTCC
ACTTTATGGGTGTGCTTGTGCTGTGAATTTTCTCAACTGGAATGTCTCCTTAGAAGCCATAAATCAAGTTGCTAAGGCAACAATGGGACTTGGAATATGTTTGTGGGTGA
AGGTGGTAGCAGAGGACTATATGAATGGTATTGCTGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTTTGTGTTCCGTG
ATATTACATCTGAGAGCTGCATCATCATCATCCCCAAATATTCACAGAACAACTAAAAGTAAAAGGGAATTTCCAAGATATCTCACATATGGCAAGGCTTCTATAAGCTA
A

mRNA sequence

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Protein sequence

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MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVLCSV
ILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASIS

HG10016787 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome