; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016830 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016830
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein SLOW GREEN 1, chloroplastic
Genome locationChr03:8498888..8501859
RNA-Seq ExpressionHG10016830
SyntenyHG10016830
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141968.1 protein SLOW GREEN 1, chloroplastic [Cucumis sativus]8.0e-16785.36Show/hide
Query:  MGSTSA--FSFSSQIELP-GPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGS
        MGSTSA  FS SSQIELP  PKFSS NVR L  C+++I+QKNYK +SQSLF S  K FHSPIHN+PFSNLSESDIRR  SPQIKISKYF+E+FVGFLVGS
Subjt:  MGSTSA--FSFSSQIELP-GPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGS

Query:  FIFMGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETL
        FIFMGCFNVRY RALPAQTS+KNP L+EK Q PEEDSEE M ERILEHDPSN+DTLKA+LYGKMRSGKTE A+K+VKRLIDLEPDEVEWR+LLALCYE L
Subjt:  FIFMGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETL

Query:  GQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLC
        G+L TAKRLF+EIL++KPLLVRALHGLALVM KNNEGESVFEMLNKALDIARDEKKLTE RSIGILIAQMHVVKGEL EGLKKFQ+LV+ENPRDFRP+LC
Subjt:  GQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLC

Query:  QGIIYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK
        QGIIY LLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQ+EFDAEFT+KK
Subjt:  QGIIYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK

XP_008440127.1 PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis melo]4.7e-16787.71Show/hide
Query:  STSAFSFSSQIELPG-PKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFM
        STSAFS SSQIELPG PKFSS NVR L N RFSI+QKNYK +SQSLFYS  K FHSPIHN+ FSNLSESDIRRSTSPQIK+SKY VE+FVGFLVGSFIFM
Subjt:  STSAFSFSSQIELPG-PKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFM

Query:  GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLD
        GCFN+RYARALPAQTSSKNPTL+EK Q PE DS EEM ERILEHDPSN+DTLKA+LYGKMRSGKTEEAIK+VKRLIDLEPDEVEWRLLLALCYETLG+L 
Subjt:  GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLD

Query:  TAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGII
        TAKRLF+EIL++KPLLVRALHGLALVM KNNEGESVFEMLNKALDIARDEKKL E RSIGILIAQMHVVKGEL EGLKKFQ+LV+ENPRDFRP+LCQGII
Subjt:  TAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGII

Query:  YGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK
        Y LLDKKKEAAEQFE YQALVPDEFPQREFIDD+MLSATTASREQFQ+EFDAEFT+KK
Subjt:  YGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK

XP_022132537.1 protein SLOW GREEN 1, chloroplastic [Momordica charantia]1.6e-14677.03Show/hide
Query:  STSAFSFSSQIELPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFMG
        STSAF   SQI LPGPK SS NVR+ PN RF  ++KNY A +        K FH P  N P S LSESD  RS+  Q  +SKYF+E+FV  L+GSFIFMG
Subjt:  STSAFSFSSQIELPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFMG

Query:  CFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDT
        CFNVRYA ALPAQ SSK+PTL EK     EDSEEEMRERILEH+P NIDTLKA+LYGKMRSGKT+EAIK+V+RLIDLEP+EVEWRLL+ALCYET+GQLDT
Subjt:  CFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDT

Query:  AKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIY
        AKRLF+EILEKKPLLVRALHGLALVM KN EG+SVF+MLNKALDIARDEKK+TEQRSIGILIAQMHVVKGEL EGLKKFQDLVDENPRDFRPYLCQGIIY
Subjt:  AKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIY

Query:  GLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK
         LLDKK+EAAEQFE Y+A+VPDEFPQ+EFIDD++LSATTASREQF++EF AEF++KK
Subjt:  GLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK

XP_022963051.1 protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata]2.7e-14676.88Show/hide
Query:  MGSTSAFSFSSQIELPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIF
        MGS SAFS  S+IELPGPKFS  NVR  P  RF++ +KNY  TS+SL +S  K F+S IH++PFSNLSESD R   + Q   S YFVE+ VGFLV  FIF
Subjt:  MGSTSAFSFSSQIELPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIF

Query:  MGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQL
        MGCFNVR+  ALPAQTS K+PT+       +EDSEEEMRERILEHD  NIDTLKA+LYGKM SGKTEEAIK+V RLIDLEPDEVEWRLLLALCYE +G+L
Subjt:  MGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQL

Query:  DTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGI
        + AK LFVEILEK PLLVRALHGLALVM KNNEG+SVFEMLNKALDIARD KK+TEQRSIGILIAQMHVVKGEL EGLKKFQ+LV+ENPRDFRPYLCQGI
Subjt:  DTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGI

Query:  IYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK
        IY LLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQ+EFDAEF++KK
Subjt:  IYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK

XP_038880966.1 protein SLOW GREEN 1, chloroplastic [Benincasa hispida]1.3e-17289.66Show/hide
Query:  STSAFSFSSQIE-LPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFM
        STSAFS SSQIE L GPKFSS NVR LPNCRFSI+QKN+K TSQSLFYSA K FHSPIHN PFSNLSESDIRRSTS QIKI K++VERFVGFLVGSFIFM
Subjt:  STSAFSFSSQIE-LPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFM

Query:  GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLD
        GCFNVRYARALP QTSSKNPT++EK QA EEDSEEEMRERILEHDPSNIDTLKA+LYGKMRSGKTEEAIK+VKRLIDLEPDEVEWRLLLAL YET GQLD
Subjt:  GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLD

Query:  TAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGII
        TAK LF+EILEKKPLLVRALHGLALVM KNNEGESVFEMLNKAL IARDEKKLTEQRSIGILIAQMHVVKGEL EGLKKFQDLVDENPRDFRPYLCQGII
Subjt:  TAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGII

Query:  YGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK
        Y LLDKKKEAAEQFE Y+ALVPDEFPQREFIDDV+L+A TASREQFQ+EFDAEF HKK
Subjt:  YGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK

TrEMBL top hitse value%identityAlignment
A0A0A0KHZ0 TPR_REGION domain-containing protein3.9e-16785.36Show/hide
Query:  MGSTSA--FSFSSQIELP-GPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGS
        MGSTSA  FS SSQIELP  PKFSS NVR L  C+++I+QKNYK +SQSLF S  K FHSPIHN+PFSNLSESDIRR  SPQIKISKYF+E+FVGFLVGS
Subjt:  MGSTSA--FSFSSQIELP-GPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGS

Query:  FIFMGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETL
        FIFMGCFNVRY RALPAQTS+KNP L+EK Q PEEDSEE M ERILEHDPSN+DTLKA+LYGKMRSGKTE A+K+VKRLIDLEPDEVEWR+LLALCYE L
Subjt:  FIFMGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETL

Query:  GQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLC
        G+L TAKRLF+EIL++KPLLVRALHGLALVM KNNEGESVFEMLNKALDIARDEKKLTE RSIGILIAQMHVVKGEL EGLKKFQ+LV+ENPRDFRP+LC
Subjt:  GQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLC

Query:  QGIIYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK
        QGIIY LLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQ+EFDAEFT+KK
Subjt:  QGIIYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK

A0A1S3B0E6 LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic2.3e-16787.71Show/hide
Query:  STSAFSFSSQIELPG-PKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFM
        STSAFS SSQIELPG PKFSS NVR L N RFSI+QKNYK +SQSLFYS  K FHSPIHN+ FSNLSESDIRRSTSPQIK+SKY VE+FVGFLVGSFIFM
Subjt:  STSAFSFSSQIELPG-PKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFM

Query:  GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLD
        GCFN+RYARALPAQTSSKNPTL+EK Q PE DS EEM ERILEHDPSN+DTLKA+LYGKMRSGKTEEAIK+VKRLIDLEPDEVEWRLLLALCYETLG+L 
Subjt:  GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLD

Query:  TAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGII
        TAKRLF+EIL++KPLLVRALHGLALVM KNNEGESVFEMLNKALDIARDEKKL E RSIGILIAQMHVVKGEL EGLKKFQ+LV+ENPRDFRP+LCQGII
Subjt:  TAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGII

Query:  YGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK
        Y LLDKKKEAAEQFE YQALVPDEFPQREFIDD+MLSATTASREQFQ+EFDAEFT+KK
Subjt:  YGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK

A0A5D3CPL4 Protein SLOW GREEN 12.3e-16787.71Show/hide
Query:  STSAFSFSSQIELPG-PKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFM
        STSAFS SSQIELPG PKFSS NVR L N RFSI+QKNYK +SQSLFYS  K FHSPIHN+ FSNLSESDIRRSTSPQIK+SKY VE+FVGFLVGSFIFM
Subjt:  STSAFSFSSQIELPG-PKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFM

Query:  GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLD
        GCFN+RYARALPAQTSSKNPTL+EK Q PE DS EEM ERILEHDPSN+DTLKA+LYGKMRSGKTEEAIK+VKRLIDLEPDEVEWRLLLALCYETLG+L 
Subjt:  GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLD

Query:  TAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGII
        TAKRLF+EIL++KPLLVRALHGLALVM KNNEGESVFEMLNKALDIARDEKKL E RSIGILIAQMHVVKGEL EGLKKFQ+LV+ENPRDFRP+LCQGII
Subjt:  TAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGII

Query:  YGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK
        Y LLDKKKEAAEQFE YQALVPDEFPQREFIDD+MLSATTASREQFQ+EFDAEFT+KK
Subjt:  YGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK

A0A6J1BU39 protein SLOW GREEN 1, chloroplastic7.6e-14777.03Show/hide
Query:  STSAFSFSSQIELPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFMG
        STSAF   SQI LPGPK SS NVR+ PN RF  ++KNY A +        K FH P  N P S LSESD  RS+  Q  +SKYF+E+FV  L+GSFIFMG
Subjt:  STSAFSFSSQIELPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFMG

Query:  CFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDT
        CFNVRYA ALPAQ SSK+PTL EK     EDSEEEMRERILEH+P NIDTLKA+LYGKMRSGKT+EAIK+V+RLIDLEP+EVEWRLL+ALCYET+GQLDT
Subjt:  CFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDT

Query:  AKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIY
        AKRLF+EILEKKPLLVRALHGLALVM KN EG+SVF+MLNKALDIARDEKK+TEQRSIGILIAQMHVVKGEL EGLKKFQDLVDENPRDFRPYLCQGIIY
Subjt:  AKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIY

Query:  GLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK
         LLDKK+EAAEQFE Y+A+VPDEFPQ+EFIDD++LSATTASREQF++EF AEF++KK
Subjt:  GLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK

A0A6J1HF02 protein SLOW GREEN 1, chloroplastic isoform X21.3e-14676.88Show/hide
Query:  MGSTSAFSFSSQIELPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIF
        MGS SAFS  S+IELPGPKFS  NVR  P  RF++ +KNY  TS+SL +S  K F+S IH++PFSNLSESD R   + Q   S YFVE+ VGFLV  FIF
Subjt:  MGSTSAFSFSSQIELPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIF

Query:  MGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQL
        MGCFNVR+  ALPAQTS K+PT+       +EDSEEEMRERILEHD  NIDTLKA+LYGKM SGKTEEAIK+V RLIDLEPDEVEWRLLLALCYE +G+L
Subjt:  MGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQL

Query:  DTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGI
        + AK LFVEILEK PLLVRALHGLALVM KNNEG+SVFEMLNKALDIARD KK+TEQRSIGILIAQMHVVKGEL EGLKKFQ+LV+ENPRDFRPYLCQGI
Subjt:  DTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGI

Query:  IYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK
        IY LLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQ+EFDAEF++KK
Subjt:  IYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFTHKK

SwissProt top hitse value%identityAlignment
O06917 TPR repeat-containing protein MJ02631.8e-0427.45Show/hide
Query:  IDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKP-----LLVRALHGLALVMTKNNEGESVFEMLNKA
        +   K I Y ++ +   EEA+ ++ + ++  P++VE +  LAL YE L ++D A +++ +I+  K      L+  ++   A ++ K  + E   E  NKA
Subjt:  IDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKP-----LLVRALHGLALVMTKNNEGESVFEMLNKA

Query:  LD
         D
Subjt:  LD

Q58741 TPR repeat-containing protein MJ13455.3e-0425.93Show/hide
Query:  ERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFE
        +++ E +  +I  L  I+   +  G+  +A+++ K+ + L PD+    L   +    LG+ + A + F ++LE  P +  A +G A+ + K  +     E
Subjt:  ERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFE

Query:  MLNKALDI
          N+ALDI
Subjt:  MLNKALDI

Q9LS48 protein SLOW GREEN 1, chloroplastic6.6e-3935.25Show/hide
Query:  RSTSPQIKISKYFVERFVGF-----LVGSFIFM-GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMR--ERILEHDPSNIDTLKAILYGKMRSGK
        R++S Q      F E+F  F     L+G+ + M G F+      LP +  S   T+ +  +  +E+   E+     +L+  P  ++TL+++L  K+  G+
Subjt:  RSTSPQIKISKYFVERFVGF-----LVGSFIFM-GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMR--ERILEHDPSNIDTLKAILYGKMRSGK

Query:  TEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIA
         EEA+K ++RL+  +P+E EW+ L+A     +G+ + A+++F EIL++ PL   AL   AL+M ++ EG +V + L  AL +A  E  + E R + ++IA
Subjt:  TEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIA

Query:  QMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQALVPDEF
        Q+H ++  ++E LK ++ L  E+P+DFRPY C+G+IY LLDK  EA EQF  Y+ L P +F
Subjt:  QMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQALVPDEF

Arabidopsis top hitse value%identityAlignment
AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.0e-3937.26Show/hide
Query:  VGFLVGSFIFMGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMR--ERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRL
        V F   + +F+    ++ + A+ A  ++     S K        EEE R  E  L   P +++ L++++  +++S K  EAI+ + RLI+LEP+E EW +
Subjt:  VGFLVGSFIFMGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMR--ERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRL

Query:  LLALCYETLGQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEG-ESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDE
        L A  +   G L++AK  F EIL K PL V A HGL +  + + +   +V + + +A+   + EK   + R   +L+AQ+ V++G+ NE LK +++LV E
Subjt:  LLALCYETLGQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEG-ESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDE

Query:  NPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQRE
         PRDFRPYLCQGIIY +L K+ EA +QFE ++ LVP   P RE+  D M+ A+    E+ QRE
Subjt:  NPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQRE

AT3G18420.1 Protein prenylyltransferase superfamily protein4.7e-4035.25Show/hide
Query:  RSTSPQIKISKYFVERFVGF-----LVGSFIFM-GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMR--ERILEHDPSNIDTLKAILYGKMRSGK
        R++S Q      F E+F  F     L+G+ + M G F+      LP +  S   T+ +  +  +E+   E+     +L+  P  ++TL+++L  K+  G+
Subjt:  RSTSPQIKISKYFVERFVGF-----LVGSFIFM-GCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMR--ERILEHDPSNIDTLKAILYGKMRSGK

Query:  TEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIA
         EEA+K ++RL+  +P+E EW+ L+A     +G+ + A+++F EIL++ PL   AL   AL+M ++ EG +V + L  AL +A  E  + E R + ++IA
Subjt:  TEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIA

Query:  QMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQALVPDEF
        Q+H ++  ++E LK ++ L  E+P+DFRPY C+G+IY LLDK  EA EQF  Y+ L P +F
Subjt:  QMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQALVPDEF

AT3G53560.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-4040.85Show/hide
Query:  PTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRA
        P++  K     E+ E  + E ++ H PS++D L++++  K++S K  EA++ + RLI LEP+E EW +L A  +   G LD AK  F EIL K PL V A
Subjt:  PTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRA

Query:  LHGLALVMTKNN-EGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQ
         HGL +  +    + + V   + +A+   + E    + R   +L+AQ+ V++G+ +E LK +Q+LV E PRDFRPYLCQGIIY LL KK +A EQF+ ++
Subjt:  LHGLALVMTKNN-EGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQ

Query:  ALVPDEFPQREFIDDVMLSATTASREQFQREFDAE
         LVP   P RE+  D M+ AT    E+ QRE   E
Subjt:  ALVPDEFPQREFIDDVMLSATTASREQFQREFDAE

AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-7752.25Show/hide
Query:  IRRSTSPQIKISKYFVERFVG----FLVGSFIFMGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTE
        IR STS  +  SK FV+         LVGSF+F+G  + + A ALP  T          V +  E  +E+M E++LE++P N++ +KA++Y KMR GK E
Subjt:  IRRSTSPQIKISKYFVERFVG----FLVGSFIFMGCFNVRYARALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTE

Query:  EAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQM
        +A+K+V++L+ LEP EVEW+LL ALCYET+G+L  AKRL+ +IL+++PLL+RALHGLA+VM K ++  SVF+ML +A+++AR   ++TE+R+I +LI QM
Subjt:  EAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRALHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQM

Query:  HVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFT
        H+V+G+  EGLK FQ +V++NPRDFRPYLCQGI+Y L+DKK+EAA+QFE Y +LVP EFPQ+ F+DDV L+A   SRE+ Q  F A+FT
Subjt:  HVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQREFDAEFT

AT5G02590.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.8e-3635.24Show/hide
Query:  PAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILE
        P  +++ + T  +    P+E+ EE   E+ L  +P++++ L++++  K ++   + A++ + RLI+++P+E EWR+L A      G  D+A + F E+L 
Subjt:  PAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILE

Query:  KKPLLVRALHGLALVMTKNNEGESVFE-MLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEA
        K P  V A HGL +  +++    S  E  +N+A++  + E K  + R   +LIAQ+ V+KG   E L+ +Q+LV + P+DFRPYLCQG+IY L+ KK EA
Subjt:  KKPLLVRALHGLALVMTKNNEGESVFE-MLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEA

Query:  AEQFETYQALVPDEFPQREFIDDVMLS
         +QF  ++ LVP+  P +E++D  +L+
Subjt:  AEQFETYQALVPDEFPQREFIDDVMLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCAACTTCAGCTTTCTCATTCTCTTCTCAAATTGAACTTCCCGGACCCAAATTCTCAAGCAAAAATGTCCGCGAATTGCCTAACTGTCGATTTAGCATTGTTCA
GAAGAATTATAAAGCAACCTCCCAAAGCTTGTTTTATTCAGCTGGGAAAAAATTTCATTCCCCCATTCACAACTCTCCCTTCTCAAACCTCTCTGAGTCCGATATACGTC
GTTCTACCTCACCCCAAATAAAAATTTCCAAATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATATGCCAGG
GCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGAGCGAAAAAGTTCAAGCTCCAGAGGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCC
AAGTAATATTGATACTCTGAAAGCTATTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGCATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGG
TTGAATGGAGGCTTTTGTTGGCTCTTTGTTATGAGACATTGGGGCAGCTGGACACGGCTAAAAGATTGTTCGTGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCT
CTGCATGGTCTGGCGTTAGTGATGACCAAGAACAACGAAGGTGAATCTGTCTTTGAGATGCTCAACAAGGCTCTAGATATTGCTCGTGATGAGAAAAAACTTACTGAGCA
GAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGAACGAGGGCTTGAAGAAGTTCCAAGATCTTGTCGATGAAAACCCAAGGGATTTTCGGC
CCTATCTTTGCCAGGGAATTATATACGGTCTGCTGGACAAAAAAAAGGAAGCTGCAGAGCAGTTCGAGACATATCAGGCCCTTGTACCTGATGAGTTTCCTCAAAGGGAA
TTTATCGACGACGTCATGTTGTCAGCTACAACTGCATCACGGGAACAGTTTCAGAGGGAATTTGATGCTGAATTTACACATAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCAACTTCAGCTTTCTCATTCTCTTCTCAAATTGAACTTCCCGGACCCAAATTCTCAAGCAAAAATGTCCGCGAATTGCCTAACTGTCGATTTAGCATTGTTCA
GAAGAATTATAAAGCAACCTCCCAAAGCTTGTTTTATTCAGCTGGGAAAAAATTTCATTCCCCCATTCACAACTCTCCCTTCTCAAACCTCTCTGAGTCCGATATACGTC
GTTCTACCTCACCCCAAATAAAAATTTCCAAATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATATGCCAGG
GCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGAGCGAAAAAGTTCAAGCTCCAGAGGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCC
AAGTAATATTGATACTCTGAAAGCTATTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGCATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGG
TTGAATGGAGGCTTTTGTTGGCTCTTTGTTATGAGACATTGGGGCAGCTGGACACGGCTAAAAGATTGTTCGTGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCT
CTGCATGGTCTGGCGTTAGTGATGACCAAGAACAACGAAGGTGAATCTGTCTTTGAGATGCTCAACAAGGCTCTAGATATTGCTCGTGATGAGAAAAAACTTACTGAGCA
GAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGAACGAGGGCTTGAAGAAGTTCCAAGATCTTGTCGATGAAAACCCAAGGGATTTTCGGC
CCTATCTTTGCCAGGGAATTATATACGGTCTGCTGGACAAAAAAAAGGAAGCTGCAGAGCAGTTCGAGACATATCAGGCCCTTGTACCTGATGAGTTTCCTCAAAGGGAA
TTTATCGACGACGTCATGTTGTCAGCTACAACTGCATCACGGGAACAGTTTCAGAGGGAATTTGATGCTGAATTTACACATAAGAAGTGA
Protein sequenceShow/hide protein sequence
MGSTSAFSFSSQIELPGPKFSSKNVRELPNCRFSIVQKNYKATSQSLFYSAGKKFHSPIHNSPFSNLSESDIRRSTSPQIKISKYFVERFVGFLVGSFIFMGCFNVRYAR
ALPAQTSSKNPTLSEKVQAPEEDSEEEMRERILEHDPSNIDTLKAILYGKMRSGKTEEAIKHVKRLIDLEPDEVEWRLLLALCYETLGQLDTAKRLFVEILEKKPLLVRA
LHGLALVMTKNNEGESVFEMLNKALDIARDEKKLTEQRSIGILIAQMHVVKGELNEGLKKFQDLVDENPRDFRPYLCQGIIYGLLDKKKEAAEQFETYQALVPDEFPQRE
FIDDVMLSATTASREQFQREFDAEFTHKK