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HG10016840 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016840
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationChr03:8620703..8620963
RNA-Seq ExpressionHG10016840
SyntenyHG10016840
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB64484.1 hypothetical protein L484_006721 [Morus notabilis]3.8e-2264.84Show/hide
Query:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNG-TINKED-----VVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        M+RSKS  G YS  YGD RFGFED  KSYSFNG ++  ED       NPE+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+KF  ++YD+
Subjt:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNG-TINKED-----VVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

KAE8647476.1 hypothetical protein Csa_003778 [Cucumis sativus]4.1e-3794.19Show/hide
Query:  MMERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        MMERSKS SGSYSKAYGDVRFGFEDNPKSYSFNGTI KEDV N ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK SHSFYDD
Subjt:  MMERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

PON52269.1 hypothetical protein TorRG33x02_308860 [Trema orientale]4.9e-2264.84Show/hide
Query:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINK------EDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        MERSKS  G YS  YGD RFGFED  KSYSFNG  ++          NPE+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+KF  ++YDD
Subjt:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINK------EDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

PRQ49076.1 hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis]4.4e-2363.83Show/hide
Query:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKED---------VVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        ME+SKSFSG YS AY + RFGFED PKSYSFNG ++K +           NPEL+RR+RVA YNMY+MEGK K SLRNSFKWIK KF  +FYD+
Subjt:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKED---------VVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

TYK12983.1 hypothetical protein E5676_scaffold255G005800 [Cucumis melo var. makuwa]1.3e-3591.76Show/hide
Query:  MMERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYD
        MMERSKS SGSYSKAYGDVRFGFEDNPKSYSF+GT+ KEDVVN ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK SHSFY+
Subjt:  MMERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYD

TrEMBL top hitse value%identityAlignment
A0A0A0KFC2 Uncharacterized protein2.0e-3794.19Show/hide
Query:  MMERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        MMERSKS SGSYSKAYGDVRFGFEDNPKSYSFNGTI KEDV N ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK SHSFYDD
Subjt:  MMERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

A0A2P5BU01 Uncharacterized protein2.4e-2264.84Show/hide
Query:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINK------EDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        MERSKS  G YS  YGD RFGFED  KSYSFNG  ++          NPE+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+KF  ++YDD
Subjt:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINK------EDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

A0A2P6RRL4 Uncharacterized protein2.2e-2363.83Show/hide
Query:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKED---------VVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        ME+SKSFSG YS AY + RFGFED PKSYSFNG ++K +           NPEL+RR+RVA YNMY+MEGK K SLRNSFKWIK KF  +FYD+
Subjt:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKED---------VVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

A0A5D3CM35 Uncharacterized protein6.4e-3691.76Show/hide
Query:  MMERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYD
        MMERSKS SGSYSKAYGDVRFGFEDNPKSYSF+GT+ KEDVVN ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK SHSFY+
Subjt:  MMERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYD

W9RA26 Uncharacterized protein1.8e-2264.84Show/hide
Query:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNG-TINKED-----VVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        M+RSKS  G YS  YGD RFGFED  KSYSFNG ++  ED       NPE+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+KF  ++YD+
Subjt:  MERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNG-TINKED-----VVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19460.1 Protein of unknown function (DUF3511)3.3e-0843.21Show/hide
Query:  SFSG-------SYSKAYGD--VRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK
        SFSG       SYS +Y D   R   + NPK    + + +    V+P+L+R++RV +Y  Y++EGKLK S R SFKWIK+K
Subjt:  SFSG-------SYSKAYGD--VRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK

AT3G05725.1 Protein of unknown function (DUF3511)3.6e-0750Show/hide
Query:  PKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIK
        P+  S + T+ K    +PE+KR++RVA Y +YS EGK+K +LR S+KWIK
Subjt:  PKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIK

AT3G62640.1 Protein of unknown function (DUF3511)1.1e-0643.9Show/hide
Query:  VVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSH
        +++ E KR++R+ATY  Y++EGK+K +++  F WIK+++SH
Subjt:  VVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSH

AT4G09890.1 Protein of unknown function (DUF3511)1.4e-1450.62Show/hide
Query:  MMERSKSFSGSYSKAYGDVRFGFEDN-PKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFS
        MM+ SKS++  YS ++    FG++ N   SY+FNG     D   PE+KR++RVA+YN+++ E KLK +L+NSFKWIKNKFS
Subjt:  MMERSKSFSGSYSKAYGDVRFGFEDN-PKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFS

AT5G11970.1 Protein of unknown function (DUF3511)6.6e-0940.54Show/hide
Query:  SYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFY
        SYS +YG       D  K  S         + +PEL+R++RVA+Y MY +EGK+K S RNSF+W+K +++   Y
Subjt:  SYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGAGAAGCAAATCATTTAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCCTACAGCTTCAATGGAACAATCAA
CAAGGAAGATGTGGTCAATCCAGAGCTCAAAAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTGAGAAACAGCTTCAAGT
GGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGAGAAGCAAATCATTTAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCCTACAGCTTCAATGGAACAATCAA
CAAGGAAGATGTGGTCAATCCAGAGCTCAAAAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTGAGAAACAGCTTCAAGT
GGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGA
Protein sequenceShow/hide protein sequence
MMERSKSFSGSYSKAYGDVRFGFEDNPKSYSFNGTINKEDVVNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD