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HG10016865 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016865
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Genome locationChr03:8832665..8836833
RNA-Seq ExpressionHG10016865
SyntenyHG10016865
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441002.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]2.7e-3863.49Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNK------------ESNEKEKTEDANPAEKQETTPPETEKQIINP
        MGACATKPK +KAE+GE        APEE+ A TK ++ GD KA EIV DD K  +K            +   KEKTE A+P EKQET PPETEKQ I+P
Subjt:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNK------------ESNEKEKTEDANPAEKQETTPPETEKQIINP

Query:  PAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVIS
          EEKPSEN PP  E  VSD VTEN T+ISSEKLMETPNE NKE DPKN    EDKIKVEVT END+P EK ESS+KPTETEKEVKVI+
Subjt:  PAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVIS

XP_008441003.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo]1.2e-4169.66Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEI-VDDDKKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKP
        MGACATKPK +KAE+GE        APEE+ A TK ++ GD KA EI VDDDKKEGN     KEKTE A+P EKQET PPETEKQ I+P  EEKPSEN P
Subjt:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEI-VDDDKKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKP

Query:  PEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVIS
        P  E  VSD VTEN T+ISSEKLMETPNE NKE DPKN    EDKIKVEVT END+P EK ESS+KPTETEKEVKVI+
Subjt:  PEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVIS

XP_038881338.1 early nodulin-75-like isoform X1 [Benincasa hispida]8.8e-5874.61Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDK---------------KEGNKESNEKEKTEDANPAEKQETTPPETEKQI
        MGACATKPKVLKAEAGEAPAPAPE +PEE+AAGTK EN GDGKATEIVDDDK               KEG KESNEKEKTED NP EKQ+TTPPET KQI
Subjt:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDK---------------KEGNKESNEKEKTEDANPAEKQETTPPETEKQI

Query:  INPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVISN
        I PP EEKPSEN PPE E PVSD VTENK      K +E+PNE NKE+DPK  EPIEDKIK EVT ENDLP EK ESS+KPTETEKEVKVISN
Subjt:  INPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVISN

XP_038881339.1 fibrous sheath CABYR-binding protein-like isoform X2 [Benincasa hispida]2.0e-5774.48Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDK--------------KEGNKESNEKEKTEDANPAEKQETTPPETEKQII
        MGACATKPKVLKAEAGEAPAPAPE +PEE+AAGTK EN GDGKATEIVDDDK              +EG KESNEKEKTED NP EKQ+TTPPET KQII
Subjt:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDK--------------KEGNKESNEKEKTEDANPAEKQETTPPETEKQII

Query:  NPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVISN
         PP EEKPSEN PPE E PVSD VTENK      K +E+PNE NKE+DPK  EPIEDKIK EVT ENDLP EK ESS+KPTETEKEVKVISN
Subjt:  NPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVISN

XP_038881340.1 early nodulin-75-like isoform X3 [Benincasa hispida]8.5e-6180.9Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPP
        MGACATKPKVLKAEAGEAPAPAPE +PEE+AAGTK EN GDGKATEIVDDDKKEG KESNEKEKTED NP EKQ+TTPPET KQII PP EEKPSEN PP
Subjt:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPP

Query:  EAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVISN
        E E PVSD VTENK      K +E+PNE NKE+DPK  EPIEDKIK EVT ENDLP EK ESS+KPTETEKEVKVISN
Subjt:  EAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVISN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein1.7e-2755.91Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNK-----------ESNEKEKTEDANPAEKQETTPPETEKQIINPP
        MGACATKPK LKAE+G+        APEE+ A TK ++ GD KA EIV DD K  +K           +   KEKTEDA+P EKQET PPETEKQ INP 
Subjt:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNK-----------ESNEKEKTEDANPAEKQETTPPETEKQIINPP

Query:  AEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKV
         EEKPSEN PP  E  VSD VTENKT+      METP+E                IKVEVT END+P EK ES++KPTETEKEVKV
Subjt:  AEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKV

A0A1S3B2F3 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X25.6e-4269.66Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEI-VDDDKKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKP
        MGACATKPK +KAE+GE        APEE+ A TK ++ GD KA EI VDDDKKEGN     KEKTE A+P EKQET PPETEKQ I+P  EEKPSEN P
Subjt:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEI-VDDDKKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKP

Query:  PEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVIS
        P  E  VSD VTEN T+ISSEKLMETPNE NKE DPKN    EDKIKVEVT END+P EK ESS+KPTETEKEVKVI+
Subjt:  PEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVIS

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X11.3e-3863.49Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNK------------ESNEKEKTEDANPAEKQETTPPETEKQIINP
        MGACATKPK +KAE+GE        APEE+ A TK ++ GD KA EIV DD K  +K            +   KEKTE A+P EKQET PPETEKQ I+P
Subjt:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNK------------ESNEKEKTEDANPAEKQETTPPETEKQIINP

Query:  PAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVIS
          EEKPSEN PP  E  VSD VTEN T+ISSEKLMETPNE NKE DPKN    EDKIKVEVT END+P EK ESS+KPTETEKEVKVI+
Subjt:  PAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVIS

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X11.3e-3863.49Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNK------------ESNEKEKTEDANPAEKQETTPPETEKQIINP
        MGACATKPK +KAE+GE        APEE+ A TK ++ GD KA EIV DD K  +K            +   KEKTE A+P EKQET PPETEKQ I+P
Subjt:  MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNK------------ESNEKEKTEDANPAEKQETTPPETEKQIINP

Query:  PAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVIS
          EEKPSEN PP  E  VSD VTEN T+ISSEKLMETPNE NKE DPKN    EDKIKVEVT END+P EK ESS+KPTETEKEVKVI+
Subjt:  PAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVIS

A0A6J1IUX1 early nodulin-75-like4.5e-2353.19Show/hide
Query:  MGACATKPKVLKAEAGE--APAPAPESAPEEMAAGTKLENDGDG-KATEIVDDDKKEGNKES------NEKEKTEDANPAEKQETTPPETEKQIINPPAE
        MGACATKPKVLKA++GE  APAPAPE +PE+  A TKLEN   G + TEIVD+D K G+K        +++EKT  A+P+EK+E  P ETEK+ +NPP E
Subjt:  MGACATKPKVLKAEAGE--APAPAPESAPEEMAAGTKLENDGDG-KATEIVDDDKKEGNKES------NEKEKTEDANPAEKQETTPPETEKQIINPPAE

Query:  EKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEV-KVISN
        EKPSE  PPE E  ++   TE K     E     P  P  ++  +N EPIE   KVEV++EN+ P EK ES +KPTETE+ V KVISN
Subjt:  EKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEV-KVISN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTGTGCCACTAAGCCAAAGGTTCTGAAGGCGGAGGCCGGCGAGGCACCGGCACCGGCGCCGGAGTCTGCTCCGGAGGAGATGGCTGCCGGAACTAAACTGGA
GAATGACGGCGATGGGAAGGCCACGGAGATCGTCGATGATGACAAGAAAGAAGGTAATAAGGAGTCCAATGAAAAGGAGAAGACAGAAGATGCAAATCCAGCGGAGAAGC
AAGAGACCACCCCACCGGAAACTGAAAAGCAAATAATAAACCCACCGGCGGAGGAGAAGCCGTCGGAAAACAAGCCACCGGAGGCGGAGGCACCAGTTTCCGACTGTGTT
ACAGAAAACAAAACAATTATCTCATCAGAGAAATTAATGGAAACCCCAAATGAGCCAAACAAAGAAAATGACCCAAAAAATGGGGAACCAATTGAAGACAAAATCAAAGT
GGAAGTTACCAATGAAAATGATCTTCCTTCTGAGAAGGCAGAGTCATCGGACAAACCAACTGAAACAGAGAAAGAAGTGAAGGTAATTAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTTGTGCCACTAAGCCAAAGGTTCTGAAGGCGGAGGCCGGCGAGGCACCGGCACCGGCGCCGGAGTCTGCTCCGGAGGAGATGGCTGCCGGAACTAAACTGGA
GAATGACGGCGATGGGAAGGCCACGGAGATCGTCGATGATGACAAGAAAGAAGGTAATAAGGAGTCCAATGAAAAGGAGAAGACAGAAGATGCAAATCCAGCGGAGAAGC
AAGAGACCACCCCACCGGAAACTGAAAAGCAAATAATAAACCCACCGGCGGAGGAGAAGCCGTCGGAAAACAAGCCACCGGAGGCGGAGGCACCAGTTTCCGACTGTGTT
ACAGAAAACAAAACAATTATCTCATCAGAGAAATTAATGGAAACCCCAAATGAGCCAAACAAAGAAAATGACCCAAAAAATGGGGAACCAATTGAAGACAAAATCAAAGT
GGAAGTTACCAATGAAAATGATCTTCCTTCTGAGAAGGCAGAGTCATCGGACAAACCAACTGAAACAGAGAAAGAAGTGAAGGTAATTAGCAATTAA
Protein sequenceShow/hide protein sequence
MGACATKPKVLKAEAGEAPAPAPESAPEEMAAGTKLENDGDGKATEIVDDDKKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCV
TENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEKAESSDKPTETEKEVKVISN