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HG10016866 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016866
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein
Genome locationChr03:8837339..8841601
RNA-Seq ExpressionHG10016866
SyntenyHG10016866
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647470.1 hypothetical protein Csa_004096 [Cucumis sativus]1.7e-7289.44Show/hide
Query:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
        MAD++TQ R H SISK+TALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFL LIFL QSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
Subjt:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR

Query:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL
        CINGFKYQRRCHKLTLGFATERLRE++M+ISAA  A  GFDG V DEEFEIHYQEPPESYL
Subjt:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL

XP_008441005.1 PREDICTED: uncharacterized protein LOC103485248 [Cucumis melo]1.2e-7390.68Show/hide
Query:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
        MAD+ETQ R H SISK+TALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFL LIFL QSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
Subjt:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR

Query:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL
        CINGFKYQRRCHKLTLGFATERLRE+KM+IS  AA  GGFDG V DEEFEIHYQEPPESYL
Subjt:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL

XP_011657774.1 uncharacterized protein LOC101206076 [Cucumis sativus]1.7e-7289.44Show/hide
Query:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
        MAD++TQ R H SISK+TALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFL LIFL QSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
Subjt:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR

Query:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL
        CINGFKYQRRCHKLTLGFATERLRE++M+ISAA  A  GFDG V DEEFEIHYQEPPESYL
Subjt:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL

XP_022949634.1 uncharacterized protein LOC111452966 [Cucurbita moschata]2.4e-6681.99Show/hide
Query:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
        MAD+E  +R H SIS +TALQALNT+IQLHFEKTLEKK AIDLQKK+LH LF LFFIFL LIFLAQSLSPRL+CRHCWIPIALLS+SHL+FYVSVAQTLR
Subjt:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR

Query:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL
        CIN FKYQRRCHKLTLG ATE+LR +KMRIS    AGGG DG  ADEEFEIHYQEPPESYL
Subjt:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL

XP_038883211.1 uncharacterized protein LOC120074230 [Benincasa hispida]6.5e-8095.65Show/hide
Query:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
        MADMETQSR H SISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLS+SHLSFYVSVAQTLR
Subjt:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR

Query:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL
        CINGFKYQRRCHKLTLGFATERLREIKM+ISAAAAAGGGFDG + DEEFEIHYQEPPESYL
Subjt:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL

TrEMBL top hitse value%identityAlignment
A0A0A0KKV5 Uncharacterized protein8.3e-7389.44Show/hide
Query:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
        MAD++TQ R H SISK+TALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFL LIFL QSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
Subjt:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR

Query:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL
        CINGFKYQRRCHKLTLGFATERLRE++M+ISAA  A  GFDG V DEEFEIHYQEPPESYL
Subjt:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL

A0A1S3B333 uncharacterized protein LOC1034852485.7e-7490.68Show/hide
Query:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
        MAD+ETQ R H SISK+TALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFL LIFL QSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
Subjt:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR

Query:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL
        CINGFKYQRRCHKLTLGFATERLRE+KM+IS  AA  GGFDG V DEEFEIHYQEPPESYL
Subjt:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL

A0A6J1GDE2 uncharacterized protein LOC1114529661.2e-6681.99Show/hide
Query:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
        MAD+E  +R H SIS +TALQALNT+IQLHFEKTLEKK AIDLQKK+LH LF LFFIFL LIFLAQSLSPRL+CRHCWIPIALLS+SHL+FYVSVAQTLR
Subjt:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR

Query:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL
        CIN FKYQRRCHKLTLG ATE+LR +KMRIS    AGGG DG  ADEEFEIHYQEPPESYL
Subjt:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL

A0A6J1IL37 uncharacterized protein LOC1114780213.7e-6580.75Show/hide
Query:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR
        MAD+E  +R H SIS +TALQALNT+IQLHFEKTLEKK AIDLQKK LH LF LFFIFL LIFLAQSLSPRL+CRHCWIPIALLS+SHL+FYVS+AQTLR
Subjt:  MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLR

Query:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL
        CIN FKYQRRCHKLTLG ATE+LR +KMRIS    AGG  DG  ADEEFEIHYQEPPESYL
Subjt:  CINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYL

A0A7N2R766 Uncharacterized protein4.9e-6579.5Show/hide
Query:  MADMET-QSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTL
        MAD ET    HH +I K+TA QALNTIIQLHFEKTLEKKR+IDLQKKELHKLFQLFFIFLGL+FLAQ+ SPRL+CRHCW+PI LLS+SHL FYVSVAQTL
Subjt:  MADMET-QSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTL

Query:  RCINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESY
        RCINGFKYQRRCHKLTLG ATE+LRE+K+R S AA  G  F+G V D+EFEIHYQEPPESY
Subjt:  RCINGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18800.1 unknown protein5.5e-5368.32Show/hide
Query:  DMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSL-SPRLECRHCWIPIALLSVSHLSFYVSVAQTLRC
        D E    +   I K+TALQALN+IIQLHFEKTLEKKRAID QKK+LHKLFQLFFIFL +IF + S  S RL CRHCW PI LLS SHL FYVSVAQTLRC
Subjt:  DMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSL-SPRLECRHCWIPIALLSVSHLSFYVSVAQTLRC

Query:  INGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGG--GFDGCVADEEFEIHYQEPPESY
        INGFKYQRRCHKLTLG AT +LR IK RI+A    GG  G +   A  + E+ YQEPP+SY
Subjt:  INGFKYQRRCHKLTLGFATERLREIKMRISAAAAAGG--GFDGCVADEEFEIHYQEPPESY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATATGGAAACCCAGAGTCGGCACCACTCATCAATCTCCAAAGACACAGCTCTCCAGGCTCTTAACACCATAATCCAACTCCATTTCGAGAAGACCCTTGAGAA
GAAGCGCGCCATAGATCTCCAAAAGAAAGAGCTCCACAAGCTTTTTCAGCTCTTCTTCATTTTCCTTGGTCTCATCTTCTTGGCCCAATCTCTTTCCCCTCGCCTCGAAT
GCCGCCATTGCTGGATCCCCATTGCTCTTCTCTCCGTTTCCCATCTCAGTTTCTATGTCTCTGTAGCTCAGACCCTTCGCTGCATCAATGGCTTCAAGTATCAGCGTCGT
TGCCATAAGCTTACTCTGGGTTTCGCCACTGAGCGCCTCAGAGAGATTAAGATGAGGATTTCCGCCGCCGCCGCTGCTGGCGGCGGGTTCGATGGGTGCGTGGCGGATGA
GGAATTTGAGATTCATTACCAGGAACCACCGGAGAGCTATTTGGATTGTACTGATCTTTGTGCAGTCCACTCAATTGTCCAATCACAACCCCGACAGTTTTTGCAATACT
TTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATATGGAAACCCAGAGTCGGCACCACTCATCAATCTCCAAAGACACAGCTCTCCAGGCTCTTAACACCATAATCCAACTCCATTTCGAGAAGACCCTTGAGAA
GAAGCGCGCCATAGATCTCCAAAAGAAAGAGCTCCACAAGCTTTTTCAGCTCTTCTTCATTTTCCTTGGTCTCATCTTCTTGGCCCAATCTCTTTCCCCTCGCCTCGAAT
GCCGCCATTGCTGGATCCCCATTGCTCTTCTCTCCGTTTCCCATCTCAGTTTCTATGTCTCTGTAGCTCAGACCCTTCGCTGCATCAATGGCTTCAAGTATCAGCGTCGT
TGCCATAAGCTTACTCTGGGTTTCGCCACTGAGCGCCTCAGAGAGATTAAGATGAGGATTTCCGCCGCCGCCGCTGCTGGCGGCGGGTTCGATGGGTGCGTGGCGGATGA
GGAATTTGAGATTCATTACCAGGAACCACCGGAGAGCTATTTGGATTGTACTGATCTTTGTGCAGTCCACTCAATTGTCCAATCACAACCCCGACAGTTTTTGCAATACT
TTTGA
Protein sequenceShow/hide protein sequence
MADMETQSRHHSSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQLFFIFLGLIFLAQSLSPRLECRHCWIPIALLSVSHLSFYVSVAQTLRCINGFKYQRR
CHKLTLGFATERLREIKMRISAAAAAGGGFDGCVADEEFEIHYQEPPESYLDCTDLCAVHSIVQSQPRQFLQYF