; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016872 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016872
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionautophagy-related protein 13b
Genome locationChr03:8891056..8894238
RNA-Seq ExpressionHG10016872
SyntenyHG10016872
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:1990316 - Atg1/ULK1 kinase complex (cellular component)
InterPro domainsIPR040182 - Autophagy-related protein 13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604273.1 Autophagy-related protein 13b, partial [Cucurbita argyrosperma subsp. sororia]7.4e-5288Show/hide
Query:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT
        RPESFDQKGN+CEMLEPGGFFP RKSQDAAVGALVRMLQKAPPLRQDFT+S  DL RP TP+SPSRN QQG QIS+SL SK RYAASSSIT SG+FVPKT
Subjt:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT

Query:  TADALEELQSYREMKNLLLRQAGKT
        TADALEELQSYREMKNLLLRQAGKT
Subjt:  TADALEELQSYREMKNLLLRQAGKT

KAG7034429.1 Autophagy-related protein 13b, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-5288Show/hide
Query:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT
        RPESFDQKGN+CEMLEPGGFFP RKSQDAAVGALVRMLQKAPPLRQDFT+S  DL RP TP+SPSRN QQG QIS+SL SK RYAASSSIT SG+FVPKT
Subjt:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT

Query:  TADALEELQSYREMKNLLLRQAGKT
        TADALEELQSYREMKNLLLRQAGKT
Subjt:  TADALEELQSYREMKNLLLRQAGKT

XP_004148643.1 autophagy-related protein 13b [Cucumis sativus]1.0e-5691.34Show/hide
Query:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT
        RPESFDQKGNLC+MLEPGGFFP RKSQDAAVGALVRMLQKAPPLRQDFTNST DLG+PPTP+SPSRNIQ+GNQISESLA KSRYA SSSI ASG+FVPKT
Subjt:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT

Query:  TADALEELQSYREMKNLLLRQAGKTHT
        TADALEELQSYREMKNLL+RQAGKTHT
Subjt:  TADALEELQSYREMKNLLLRQAGKTHT

XP_008441017.1 PREDICTED: autophagy-related protein 13b isoform X1 [Cucumis melo]2.6e-5792.91Show/hide
Query:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT
        RPESFDQKGNLC+MLEPGGFFP RKSQDAAVGALVRMLQKAPPLRQDFTNST DLG+PPTP+SPSRNIQ GNQISESLASKSRYA SSSI ASG+FVPKT
Subjt:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT

Query:  TADALEELQSYREMKNLLLRQAGKTHT
        TADALEELQSYREMKNLLLRQAGKTHT
Subjt:  TADALEELQSYREMKNLLLRQAGKTHT

XP_038882060.1 autophagy-related protein 13b [Benincasa hispida]2.5e-5592.13Show/hide
Query:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT
        RPESFDQKGNLCEMLEPGGFFP RKSQDAAVGALVRMLQKA PLRQDFTN T DLGRPPTP+SPSRNIQQGNQISESLASKSRYAA SS+TASG+FVPKT
Subjt:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT

Query:  TADALEELQSYREMKNLLLRQAGKTHT
        TADALEELQSYREMKNLLLRQAG T T
Subjt:  TADALEELQSYREMKNLLLRQAGKTHT

TrEMBL top hitse value%identityAlignment
A0A1S3B2G3 autophagy-related protein 13b isoform X11.3e-5792.91Show/hide
Query:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT
        RPESFDQKGNLC+MLEPGGFFP RKSQDAAVGALVRMLQKAPPLRQDFTNST DLG+PPTP+SPSRNIQ GNQISESLASKSRYA SSSI ASG+FVPKT
Subjt:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT

Query:  TADALEELQSYREMKNLLLRQAGKTHT
        TADALEELQSYREMKNLLLRQAGKTHT
Subjt:  TADALEELQSYREMKNLLLRQAGKTHT

A0A5A7SIS7 Autophagy-related protein 13b isoform X12.2e-4992.98Show/hide
Query:  MLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKTTADALEELQSYRE
        MLEPGGFFP RKSQDAAVGALVRMLQKAPPLRQDFTNST DLG+PPTP+SPSRNIQ GNQISESLASKSRYA SSSI ASG+FVPKTTADALEELQSYRE
Subjt:  MLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKTTADALEELQSYRE

Query:  MKNLLLRQAGKTHT
        MKNLLLRQAGKTHT
Subjt:  MKNLLLRQAGKTHT

A0A6J1BUH2 autophagy-related protein 13b5.2e-5180.45Show/hide
Query:  LPSNSMRPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASG
        L     RPESFD KGNLCEMLEPGGFFP RKSQDAA+GALV MLQKAPPLRQDFTNS TD  R  TP+ PSRNIQQGNQISE++++K RYAASSS+TASG
Subjt:  LPSNSMRPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASG

Query:  IFVPKTTADALEELQSYREMKNLLLRQAGKTHT
        + +PKTTADALEELQ+YREMKNLLLRQAGKTHT
Subjt:  IFVPKTTADALEELQSYREMKNLLLRQAGKTHT

A0A6J1GDD7 autophagy-related protein 13b1.4e-5187.2Show/hide
Query:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT
        RPESFDQKGN+CEMLEPGGFFP RKSQDAAVGALVRMLQKAPPLRQDFT+   DL RP TP+SPSRN QQG QIS+SL SK RYAASSSIT SG+FVPKT
Subjt:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT

Query:  TADALEELQSYREMKNLLLRQAGKT
        TADALEELQSYREMKNLLLRQAGKT
Subjt:  TADALEELQSYREMKNLLLRQAGKT

A0A6J1IKL7 autophagy-related protein 13b2.3e-5187.2Show/hide
Query:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT
        RPESFDQKGN+CEMLE GGFFP RKSQDAAVGALVRMLQKAPPLRQDFT+S  DL RP TP+SPSRN QQG QIS+SLASK RYAASSSIT SG+FVPKT
Subjt:  RPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKT

Query:  TADALEELQSYREMKNLLLRQAGKT
        TADALEELQSYREMKNLLL+QAGKT
Subjt:  TADALEELQSYREMKNLLLRQAGKT

SwissProt top hitse value%identityAlignment
F4J8V5 Autophagy-related protein 13b4.2e-1849.21Show/hide
Query:  LPSNSMRPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASG
        +   + RP SFD +G++ E  +  G + P+KSQDAAVGALVRML+KAPPLRQD + S+        PE  S N         +  + +   A +SITASG
Subjt:  LPSNSMRPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASG

Query:  I-FVPKTTADALEELQSYREMKNLLL
        I    KTTADALEEL+SY+EMKN LL
Subjt:  I-FVPKTTADALEELQSYREMKNLLL

Q9SCK0 Autophagy-related protein 13a4.9e-0637.62Show/hide
Query:  RKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSI--TASGIFVPKTTADALEELQSYREMKNLLLRQ
        R SQDAAVG LV ML+ APPLRQD                           S  +AS S      S+  T S   + ++T+DALEEL++Y+++K+LLL +
Subjt:  RKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSI--TASGIFVPKTTADALEELQSYREMKNLLLRQ

Query:  A
        +
Subjt:  A

Arabidopsis top hitse value%identityAlignment
AT3G18770.1 Autophagy-related protein 133.0e-1949.21Show/hide
Query:  LPSNSMRPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASG
        +   + RP SFD +G++ E  +  G + P+KSQDAAVGALVRML+KAPPLRQD + S+        PE  S N         +  + +   A +SITASG
Subjt:  LPSNSMRPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASG

Query:  I-FVPKTTADALEELQSYREMKNLLL
        I    KTTADALEEL+SY+EMKN LL
Subjt:  I-FVPKTTADALEELQSYREMKNLLL

AT3G49590.1 Autophagy-related protein 133.5e-0737.62Show/hide
Query:  RKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSI--TASGIFVPKTTADALEELQSYREMKNLLLRQ
        R SQDAAVG LV ML+ APPLRQD                           S  +AS S      S+  T S   + ++T+DALEEL++Y+++K+LLL +
Subjt:  RKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSI--TASGIFVPKTTADALEELQSYREMKNLLLRQ

Query:  A
        +
Subjt:  A

AT3G49590.2 Autophagy-related protein 133.5e-0737.62Show/hide
Query:  RKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSI--TASGIFVPKTTADALEELQSYREMKNLLLRQ
        R SQDAAVG LV ML+ APPLRQD                           S  +AS S      S+  T S   + ++T+DALEEL++Y+++K+LLL +
Subjt:  RKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSI--TASGIFVPKTTADALEELQSYREMKNLLLRQ

Query:  A
        +
Subjt:  A

AT3G49590.3 Autophagy-related protein 133.5e-0737.62Show/hide
Query:  RKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSI--TASGIFVPKTTADALEELQSYREMKNLLLRQ
        R SQDAAVG LV ML+ APPLRQD                           S  +AS S      S+  T S   + ++T+DALEEL++Y+++K+LLL +
Subjt:  RKSQDAAVGALVRMLQKAPPLRQDFTNSTTDLGRPPTPESPSRNIQQGNQISESLASKSRYAASSSI--TASGIFVPKTTADALEELQSYREMKNLLLRQ

Query:  A
        +
Subjt:  A


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAAAGGCACTTTATGTACTGTGAGGACAAGGACAAGGGAGCTTACAGTAAAGCATCTGCTAGTATGAAGGGTTCACCATTTAGCGTCCTCTCTGCTAGATGGCC
AAATAGGGCAATCAGATCAAGAATTTTGATCCATTCTCTGCCTTCCAATTCTATGAGGCCTGAATCCTTCGACCAAAAAGGAAATCTTTGTGAGATGCTGGAACCCGGGG
GATTTTTCCCGCCCCGTAAATCTCAAGATGCTGCTGTTGGTGCCCTAGTACGTATGCTTCAAAAGGCTCCACCACTTCGCCAAGACTTCACGAATTCCACCACAGATCTT
GGACGACCCCCTACACCTGAGTCTCCAAGCAGAAATATCCAACAGGGAAATCAGATATCCGAGTCATTGGCTTCAAAGAGTCGCTATGCTGCCTCCTCTAGTATCACAGC
CTCTGGTATTTTTGTGCCTAAAACTACAGCTGATGCATTAGAAGAACTGCAGAGCTACAGAGAGATGAAGAATTTGCTGCTCAGGCAAGCTGGCAAGACTCACACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAAAGGCACTTTATGTACTGTGAGGACAAGGACAAGGGAGCTTACAGTAAAGCATCTGCTAGTATGAAGGGTTCACCATTTAGCGTCCTCTCTGCTAGATGGCC
AAATAGGGCAATCAGATCAAGAATTTTGATCCATTCTCTGCCTTCCAATTCTATGAGGCCTGAATCCTTCGACCAAAAAGGAAATCTTTGTGAGATGCTGGAACCCGGGG
GATTTTTCCCGCCCCGTAAATCTCAAGATGCTGCTGTTGGTGCCCTAGTACGTATGCTTCAAAAGGCTCCACCACTTCGCCAAGACTTCACGAATTCCACCACAGATCTT
GGACGACCCCCTACACCTGAGTCTCCAAGCAGAAATATCCAACAGGGAAATCAGATATCCGAGTCATTGGCTTCAAAGAGTCGCTATGCTGCCTCCTCTAGTATCACAGC
CTCTGGTATTTTTGTGCCTAAAACTACAGCTGATGCATTAGAAGAACTGCAGAGCTACAGAGAGATGAAGAATTTGCTGCTCAGGCAAGCTGGCAAGACTCACACATAA
Protein sequenceShow/hide protein sequence
MVKRHFMYCEDKDKGAYSKASASMKGSPFSVLSARWPNRAIRSRILIHSLPSNSMRPESFDQKGNLCEMLEPGGFFPPRKSQDAAVGALVRMLQKAPPLRQDFTNSTTDL
GRPPTPESPSRNIQQGNQISESLASKSRYAASSSITASGIFVPKTTADALEELQSYREMKNLLLRQAGKTHT