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HG10016938 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016938
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:9495366..9501059
RNA-Seq ExpressionHG10016938
SyntenyHG10016938
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8516802.1 hypothetical protein F0562_017088 [Nyssa sinensis]3.9e-0443.69Show/hide
Query:  GDIQSEIVMEVVIVRRSEIELRERGIGCVELKEIWTEDEPQEEGSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAAAAVAAARAVVGLGGGRNGRAVVS
        G ++ E+V+E V     E+EL E  +G ++L  +  EDEP++E  NA D DDGDDDL +EVEDTA  A      TAA A  AA AVVG  G +    +V+
Subjt:  GDIQSEIVMEVVIVRRSEIELRERGIGCVELKEIWTEDEPQEEGSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAAAAVAAARAVVGLGGGRNGRAVVS

Query:  SVE
         ++
Subjt:  SVE
KCW49000.1 hypothetical protein EUGRSUZ_K02613 [Eucalyptus grandis]7.8e-0544.76Show/hide
Query:  GDIQSEIVMEVVIVRRSEIELRERGIGCVELKEIWTEDEPQEEGSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAAAAVAAARAVVGLGGGRNGRAVVS
        G+++ E+V E   V   E+EL E  +G VEL E+  EDEP++EG   + D  G+D++ DE+E+ AA A       A AA AAA AVVG+  G +G AVV 
Subjt:  GDIQSEIVMEVVIVRRSEIELRERGIGCVELKEIWTEDEPQEEGSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAAAAVAAARAVVGLGGGRNGRAVVS

Query:  SVEIG
        +VE+G
Subjt:  SVEIG
TrEMBL top hitse value%identityAlignment
A0A059A6N3 Uncharacterized protein3.8e-0544.76Show/hide
Query:  GDIQSEIVMEVVIVRRSEIELRERGIGCVELKEIWTEDEPQEEGSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAAAAVAAARAVVGLGGGRNGRAVVS
        G+++ E+V E   V   E+EL E  +G VEL E+  EDEP++EG   + D  G+D++ DE+E+ AA A       A AA AAA AVVG+  G +G AVV 
Subjt:  GDIQSEIVMEVVIVRRSEIELRERGIGCVELKEIWTEDEPQEEGSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAAAAVAAARAVVGLGGGRNGRAVVS

Query:  SVEIG
        +VE+G
Subjt:  SVEIG
A0A5J4ZGS4 Uncharacterized protein1.9e-0443.69Show/hide
Query:  GDIQSEIVMEVVIVRRSEIELRERGIGCVELKEIWTEDEPQEEGSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAAAAVAAARAVVGLGGGRNGRAVVS
        G ++ E+V+E V     E+EL E  +G ++L  +  EDEP++E  NA D DDGDDDL +EVEDTA  A      TAA A  AA AVVG  G +    +V+
Subjt:  GDIQSEIVMEVVIVRRSEIELRERGIGCVELKEIWTEDEPQEEGSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAAAAVAAARAVVGLGGGRNGRAVVS

Query:  SVE
         ++
Subjt:  SVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCATGGGTTGGATTAGCAAAATCGTGACCACGTCCACTGGACCAGATCCACCAGTTACCCAGCCAAGTGTCAAAGGGTCCAAGTGGGTCAGCAAAATCATGTC
ATGTGAGCAAAATGAGTATAGTTGTGGTAGGGTTGACCAAGACATCGGTGATATTCAGAGCGAGATTGTAATGGAGGTTGTTATTGTTAGGCGTAGTGAAATTGAACTGC
GTGAGAGAGGCATCGGTTGCGTGGAATTGAAGGAGATTTGGACGGAAGATGAGCCACAAGAGGAAGGCAGCAATGCCGAGGACGATGACGACGGTGATGATGATTTGACA
GATGAGGTTGAGGATACAGCCGCAGCAGCAGTTGCAGAGGCAGCCGAGACAGCCGCAGCCGCCGTCGCCGCGGCCAGGGCGGTGGTAGGACTTGGAGGAGGGAGGAATGG
AAGGGCCGTAGTAAGCTCCGTTGAGATTGGATGCCATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCCATGGGTTGGATTAGCAAAATCGTGACCACGTCCACTGGACCAGATCCACCAGTTACCCAGCCAAGTGTCAAAGGGTCCAAGTGGGTCAGCAAAATCATGTC
ATGTGAGCAAAATGAGTATAGTTGTGGTAGGGTTGACCAAGACATCGGTGATATTCAGAGCGAGATTGTAATGGAGGTTGTTATTGTTAGGCGTAGTGAAATTGAACTGC
GTGAGAGAGGCATCGGTTGCGTGGAATTGAAGGAGATTTGGACGGAAGATGAGCCACAAGAGGAAGGCAGCAATGCCGAGGACGATGACGACGGTGATGATGATTTGACA
GATGAGGTTGAGGATACAGCCGCAGCAGCAGTTGCAGAGGCAGCCGAGACAGCCGCAGCCGCCGTCGCCGCGGCCAGGGCGGTGGTAGGACTTGGAGGAGGGAGGAATGG
AAGGGCCGTAGTAAGCTCCGTTGAGATTGGATGCCATTGTTGA
Protein sequenceShow/hide protein sequence
MDAMGWISKIVTTSTGPDPPVTQPSVKGSKWVSKIMSCEQNEYSCGRVDQDIGDIQSEIVMEVVIVRRSEIELRERGIGCVELKEIWTEDEPQEEGSNAEDDDDGDDDLT
DEVEDTAAAAVAEAAETAAAAVAAARAVVGLGGGRNGRAVVSSVEIGCHC