; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016941 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016941
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTranscription termination factor MTEF1
Genome locationChr03:9507849..9509124
RNA-Seq ExpressionHG10016941
SyntenyHG10016941
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647430.1 hypothetical protein Csa_003511 [Cucumis sativus]7.2e-16794.89Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSN R SF+FPSKLPPRNP IPPLSPPLPP PPH D HSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        P+A+ASLPDIRSAVDFMTSMNFT LE RRIVGMCPEILTSRAS L+PIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKTSEMKFREKLE
        LK+SEMKFREKLE
Subjt:  LKTSEMKFREKLE

XP_011657726.1 transcription factor E2FA isoform X1 [Cucumis sativus]7.2e-16794.89Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSN R SF+FPSKLPPRNP IPPLSPPLPP PPH D HSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        P+A+ASLPDIRSAVDFMTSMNFT LE RRIVGMCPEILTSRAS L+PIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKTSEMKFREKLE
        LK+SEMKFREKLE
Subjt:  LKTSEMKFREKLE

XP_011657727.1 transcription factor E2FA isoform X2 [Cucumis sativus]7.2e-16794.89Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSN R SF+FPSKLPPRNP IPPLSPPLPP PPH D HSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        P+A+ASLPDIRSAVDFMTSMNFT LE RRIVGMCPEILTSRAS L+PIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKTSEMKFREKLE
        LK+SEMKFREKLE
Subjt:  LKTSEMKFREKLE

XP_038883666.1 transcription termination factor MTEF1, chloroplastic isoform X1 [Benincasa hispida]2.0e-16996.51Show/hide
Query:  MAD-SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDH
        MAD SSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSN RI+FVFPSKLPPRNPTI PLSPPLPPPPPHND HSDFQEKMLFLDSIGIDFLSVIKDH
Subjt:  MAD-SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDH

Query:  PPIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK
        PP+A+ASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTS ASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK
Subjt:  PPIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK

Query:  HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
        HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
Subjt:  HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE

Query:  LLKTSEMKFREKLEI
        LLKTSEMKFR+KLE+
Subjt:  LLKTSEMKFREKLEI

XP_038883667.1 transcription termination factor MTEF1, chloroplastic isoform X2 [Benincasa hispida]5.9e-16996.82Show/hide
Query:  MAD-SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDH
        MAD SSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSN RI+FVFPSKLPPRNPTI PLSPPLPPPPPHND HSDFQEKMLFLDSIGIDFLSVIKDH
Subjt:  MAD-SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDH

Query:  PPIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK
        PP+A+ASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTS ASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK
Subjt:  PPIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK

Query:  HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
        HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
Subjt:  HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE

Query:  LLKTSEMKFREKLE
        LLKTSEMKFR+KLE
Subjt:  LLKTSEMKFREKLE

TrEMBL top hitse value%identityAlignment
A0A0A0KKL6 Uncharacterized protein4.2e-13681.21Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSN R SF+FPSKLPPRNP IPPLSPPLPP PPH D HSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        P+A+ASLPDIRSAVDFMTSMNFT LE RRIVGMCPEILTSRAS L+PIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISE    
Subjt:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
                                              LFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKTSEMKFREKLEI
        LK+SEMKFREKLE+
Subjt:  LKTSEMKFREKLEI

A0A1S4E3U8 transcription termination factor MTEF1, chloroplastic1.1e-16594.25Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI HSSPSPLFPSLPR RTL FPVLSN R SF+FPSKLPPR PTIPPLS PLPP PPH D HSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        P+A+ASLPDIRSAVDFMTSMNFTALEFRRIVGMCPE+LTSRASDL+PIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKTSEMKFREKLE
        LK+SEMKFREKLE
Subjt:  LKTSEMKFREKLE

A0A5A7SKM3 Transcription termination factor MTEF13.9e-16693.95Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI HSSPSPLFPSLPR RTL FPVLSN R SF+FPSKLPPR PTIPPLS PLPP PPH D HSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        P+A+ASLPDIRSAVDFMTSMNFTALEFRRIVGMCPE+LTSRASDL+PIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKTSEMKFREKLEI
        LK+SEMKFREKLE+
Subjt:  LKTSEMKFREKLEI

A0A6J1HHJ6 transcription termination factor MTEF1, chloroplastic8.9e-15588.82Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP
        M D++LHLLSNGGF+HHSSPS LFPSL RSRTLQFP + N +I+F+ PSKLP R P IPPLSPPLPPPP H+   S+FQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        P+ATASL DIRSAVDFMTSMNFTA+EFRRIVGMCPEILTSR SD+VP+FTFLLREARVDGSDIKRVINRRPRLLACSVK+RLRPT+YFLQSIGISEVHKH
Subjt:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQLFC SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP L
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKTSEMKFREKLE
        LKTSEMKFREKLE
Subjt:  LKTSEMKFREKLE

A0A6J1IAF5 transcription termination factor MTEF1, chloroplastic2.1e-15688.82Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP
        M D++LHLLSNGGF+HHSSPS LFPSL RSRTLQFP++SN + +F+ PSKLP R P IPPLSPPLPPPP H+   S+FQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        P+ATASL DIRSAVDFMTSMNFTA+EFRRIVGMCPEILTSR SD+VP+FTFLLREARVDGSDIKRVINRRPRLLACSVK+RLRPT+YFLQSIGISEVHKH
Subjt:  PIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQLFC SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP L
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKTSEMKFREKLE
        LKTSEMKFREKLE
Subjt:  LKTSEMKFREKLE

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic1.2e-1532.76Show/hide
Query:  LREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQS-IGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIK
        L+E  +    I  ++ + P LL  S+  ++RP + FL +  G+++      +    +LL CS+  KL P + ++ +LG        M   FP L  Y++ 
Subjt:  LREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQS-IGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIK

Query:  ENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKLEIDEVQQ
        +NL PK  Y    M R L++L EFP +FS+SLE RI PRH   VE  V F L  +L  ++ +F  ++  D+V++
Subjt:  ENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKLEIDEVQQ

F4JVI3 Transcription termination factor MTERF5, chloroplastic3.2e-2430.77Show/hide
Query:  FLDSIGI---DFLSVIKDHPPIATASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVK
        FL  +GI   D  +++   P I   SL D ++  + F+ ++     ++ +I+   P ILT     L     FL +    +   I R++ R P +++ SV+
Subjt:  FLDSIGI---DFLSVIKDHPPIATASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVK

Query:  DRLRPTLYFLQSIGISE---VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFS
        D+LRPT+ + +S+ +     +H+       S+E  L P  EFF   GF   +  IM  R+  L+ +S+KEN+ PK +YF   M     EL +FP +F +S
Subjt:  DRLRPTLYFLQSIGISE---VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFS

Query:  LENRIKPRHQSCVEKGVCFPLPELLKTSEMKFRE
        L+ RIKPR++     GV   L ++L  S ++F +
Subjt:  LENRIKPRHQSCVEKGVCFPLPELLKTSEMKFRE

Q84X53 Transcription termination factor MTEF1, chloroplastic2.9e-4139Show/hide
Query:  FQEKMLFLDSIGIDFLSVIKDHPPIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTS-RASDLVPIFTFLLREARVDGSDIKRVINRRPRLLAC
        F+EK+++L  + +D    ++ +P + +A +  + S    ++S   +     RI+ M P++LTS   S+++P+  FL  E  +   DI + I+R PRLL  
Subjt:  FQEKMLFLDSIGIDFLSVIKDHPPIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTS-RASDLVPIFTFLLREARVDGSDIKRVINRRPRLLAC

Query:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH
        SV  +LRP L FL+++G     +   ++T LL  +VE  LIP+IE+  E LGF+R +   M  R P L  YS+  NL PK+ +F+ EM  ++KELK FP 
Subjt:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH

Query:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKL
        YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   L
Subjt:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKL

Q9FM80 Transcription termination factor MTERF9, chloroplastic8.1e-2027.46Show/hide
Query:  QEKMLFLDSIGI---DFLSVIKDHPPIATASLP-DIRSAVDFMTSMNFTALEFRRIVGMCPEILT-SRASDLVPIFTFLLREARVDGSDIKRVINRRPRL
        QE++ +L S+G+   D   ++   P I   ++  ++++ + F+  +     +  +IV   P + + S  + L P   +L+ E  +  +D+ +V+   P++
Subjt:  QEKMLFLDSIGI---DFLSVIKDHPPIATASLP-DIRSAVDFMTSMNFTALEFRRIVGMCPEILT-SRASDLVPIFTFLLREARVDGSDIKRVINRRPRL

Query:  LACSVKDRLRPTLYFL-QSIG------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKEL
        L   +         FL + +G      +  V KH  LL  S+++  +PRI F  ++G    D L +     Q+   S+++NL+PK  Y V E+  E+  L
Subjt:  LACSVKDRLRPTLYFL-QSIG------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKEL

Query:  KEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPELLKTSE
         ++P Y S SL+ RI+PRH+  VE     KG  FPL  L+   E
Subjt:  KEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPELLKTSE

Q9SZL6 Transcription termination factor MTERF6, chloroplastic/mitochondrial4.9e-1727.04Show/hide
Query:  SVIKDHPPIATASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEILT-SRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQ-
        S I   PPI + S+ + +   + F  ++     +  +++   P +++ S  + L  I +FL          I +V+ + P L+  SV  RLRPT  FL+ 
Subjt:  SVIKDHPPIATASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEILT-SRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQ-

Query:  SIGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPR
        S+G+SE      V     LL   V + L P  ++ +  GF       M   +PQ+   S+K +L+P++ + V  MGR + E+  +P +F   L+ +++ R
Subjt:  SIGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPR

Query:  HQSCVEKGVCFPLPELLKTSEMKFREKLEIDEV
         +   +  +   L E+L  +  KF EK    EV
Subjt:  HQSCVEKGVCFPLPELLKTSEMKFREKLEIDEV

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein2.0e-4239Show/hide
Query:  FQEKMLFLDSIGIDFLSVIKDHPPIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTS-RASDLVPIFTFLLREARVDGSDIKRVINRRPRLLAC
        F+EK+++L  + +D    ++ +P + +A +  + S    ++S   +     RI+ M P++LTS   S+++P+  FL  E  +   DI + I+R PRLL  
Subjt:  FQEKMLFLDSIGIDFLSVIKDHPPIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTS-RASDLVPIFTFLLREARVDGSDIKRVINRRPRLLAC

Query:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH
        SV  +LRP L FL+++G     +   ++T LL  +VE  LIP+IE+  E LGF+R +   M  R P L  YS+  NL PK+ +F+ EM  ++KELK FP 
Subjt:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH

Query:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKL
        YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   L
Subjt:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKL

AT2G34620.1 Mitochondrial transcription termination factor family protein6.5e-4942.26Show/hide
Query:  QEKMLFLDSIGIDFLSVIKDHPPIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRA-SDLVPIFTFLLREARVDGSDIKRVINRRPRLLACS
        +EK+L L+ +GID    +  +P + +A L  I+S + F+ S      +  RI+GMCP+ILTS   ++L P+F FL  +  V  +  +RVI + PRLL  S
Subjt:  QEKMLFLDSIGIDFLSVIKDHPPIATASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRA-SDLVPIFTFLLREARVDGSDIKRVINRRPRLLACS

Query:  VKDRLRPTLYFLQSIGISEV----HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYF
        V+D+L+P L++LQ +G+ ++    ++   LL  SVE  LIP++ F E++GFSR +A+ M  R P LF +SI+ N +PKL+YF+ E+  +L+ LKEFP YF
Subjt:  VKDRLRPTLYFLQSIGISEV----HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYF

Query:  SFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKL
        +FSLE RIKPRH   +E+G+  PL  +LK+++ +F + L
Subjt:  SFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKL

AT2G36000.1 Mitochondrial transcription termination factor family protein1.1e-8553.92Show/hide
Query:  MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDH
        M   +L  LS+    +HH+     FPSL R R   FP LS F+ +    S    ++P IP LS             S   EK+++LDS+GIDFL++I  H
Subjt:  MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDH

Query:  PPIATASLPDIRSAVDFMTS--MNFTALEFRRIVGMCPEILTS-RASDLVPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGIS
        PP+ + +L  + S VD+MT+  +NFT  +FRR+V MCPE+LTS   S  +P+ TFLLRE  VD   D+++ + RRPRLLACSV  +LRPTLYFLQ IGI 
Subjt:  PPIATASLPDIRSAVDFMTS--MNFTALEFRRIVGMCPEILTS-RASDLVPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGIS

Query:  EVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCF
        + HKHT LLSCSV+ KL+PRI++FE LGFSRR A  MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  KGV F
Subjt:  EVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCF

Query:  PLPELLKTSEMKFREKLEI
        PLP +LKT+E  FR+ LE+
Subjt:  PLPELLKTSEMKFREKLEI

AT2G36000.2 Mitochondrial transcription termination factor family protein1.1e-8553.92Show/hide
Query:  MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDH
        M   +L  LS+    +HH+     FPSL R R   FP LS F+ +    S    ++P IP LS             S   EK+++LDS+GIDFL++I  H
Subjt:  MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDH

Query:  PPIATASLPDIRSAVDFMTS--MNFTALEFRRIVGMCPEILTS-RASDLVPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGIS
        PP+ + +L  + S VD+MT+  +NFT  +FRR+V MCPE+LTS   S  +P+ TFLLRE  VD   D+++ + RRPRLLACSV  +LRPTLYFLQ IGI 
Subjt:  PPIATASLPDIRSAVDFMTS--MNFTALEFRRIVGMCPEILTS-RASDLVPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGIS

Query:  EVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCF
        + HKHT LLSCSV+ KL+PRI++FE LGFSRR A  MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  KGV F
Subjt:  EVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCF

Query:  PLPELLKTSEMKFREKLEI
        PLP +LKT+E  FR+ LE+
Subjt:  PLPELLKTSEMKFREKLEI

AT3G18870.1 Mitochondrial transcription termination factor family protein4.7e-3132.84Show/hide
Query:  IPPLSPPLPPPPPHNDR------HSDFQEKMLFLDSIGIDFLSVIKDHPPIATAS--LPDIRSAVDFMTSMNFTALEFRRIVGMCPEIL--TSRASDLVP
        + PLS    PP P + +       +  +E +  L S+GI     +  +P +A  +  L  I SAV+ + S   +  +F R+V +CP++   T   S L P
Subjt:  IPPLSPPLPPPPPHNDR------HSDFQEKMLFLDSIGIDFLSVIKDHPPIATAS--LPDIRSAVDFMTSMNFTALEFRRIVGMCPEIL--TSRASDLVP

Query:  IFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYS
        +F FL  E      + + +I   P +L   V+  LRPTL +L+ +G+  +++    +  +L+  V EKL  ++ F +++GF   +A  +  R P +F YS
Subjt:  IFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYS

Query:  IKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREK
        +++NL PK  + V +M REL+ELK+FP YF+FSL  RI+PRH    +K V   L  +L   + KF  K
Subjt:  IKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTCATCTCTTCACCTTCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCCCGCTCCAGAACCCTCCAATTCCCCGT
CCTCTCCAATTTCAGAATCTCTTTCGTCTTCCCCTCCAAACTCCCTCCTCGCAACCCCACCATTCCTCCCCTCTCGCCCCCGCTTCCCCCGCCTCCGCCCCACAACGACC
GCCACTCTGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCATCGCTACCGCCTCCCTCCCCGACATC
AGATCAGCCGTCGATTTCATGACCTCGATGAATTTCACCGCCCTCGAGTTCCGTCGAATCGTCGGCATGTGCCCCGAGATTCTCACCTCTCGCGCTTCCGACCTCGTCCC
TATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGCTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGCTCGCCTGTAGCGTAAAAGATCGGCTCCGTC
CAACTCTCTACTTCCTACAAAGCATCGGCATATCCGAGGTACATAAACACACTTCCTTACTCTCCTGTAGCGTGGAAGAGAAGTTGATTCCGAGAATTGAGTTCTTCGAA
AACCTAGGGTTTTCTCGGCGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTATTCTGCTACAGCATAAAGGAGAATCTGGAGCCGAAACTGAATTACTTCGTGGT
GGAAATGGGAAGAGAATTGAAGGAATTGAAGGAATTTCCTCATTACTTCTCGTTTAGCTTAGAGAACAGGATCAAGCCGAGACATCAAAGCTGTGTGGAGAAGGGAGTTT
GTTTTCCATTGCCGGAGTTGTTGAAAACCAGTGAGATGAAATTCCGGGAGAAATTGGAGATAGATGAAGTTCAGCAGTATAATCAACATGTGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTCATCTCTTCACCTTCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCCCGCTCCAGAACCCTCCAATTCCCCGT
CCTCTCCAATTTCAGAATCTCTTTCGTCTTCCCCTCCAAACTCCCTCCTCGCAACCCCACCATTCCTCCCCTCTCGCCCCCGCTTCCCCCGCCTCCGCCCCACAACGACC
GCCACTCTGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCATCGCTACCGCCTCCCTCCCCGACATC
AGATCAGCCGTCGATTTCATGACCTCGATGAATTTCACCGCCCTCGAGTTCCGTCGAATCGTCGGCATGTGCCCCGAGATTCTCACCTCTCGCGCTTCCGACCTCGTCCC
TATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGCTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGCTCGCCTGTAGCGTAAAAGATCGGCTCCGTC
CAACTCTCTACTTCCTACAAAGCATCGGCATATCCGAGGTACATAAACACACTTCCTTACTCTCCTGTAGCGTGGAAGAGAAGTTGATTCCGAGAATTGAGTTCTTCGAA
AACCTAGGGTTTTCTCGGCGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTATTCTGCTACAGCATAAAGGAGAATCTGGAGCCGAAACTGAATTACTTCGTGGT
GGAAATGGGAAGAGAATTGAAGGAATTGAAGGAATTTCCTCATTACTTCTCGTTTAGCTTAGAGAACAGGATCAAGCCGAGACATCAAAGCTGTGTGGAGAAGGGAGTTT
GTTTTCCATTGCCGGAGTTGTTGAAAACCAGTGAGATGAAATTCCGGGAGAAATTGGAGATAGATGAAGTTCAGCAGTATAATCAACATGTGAATTAG
Protein sequenceShow/hide protein sequence
MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNFRISFVFPSKLPPRNPTIPPLSPPLPPPPPHNDRHSDFQEKMLFLDSIGIDFLSVIKDHPPIATASLPDI
RSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFE
NLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKLEIDEVQQYNQHVN