; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016988 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016988
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S acidic ribosomal protein P2-like
Genome locationChr03:9916232..9916799
RNA-Seq ExpressionHG10016988
SyntenyHG10016988
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604363.1 hypothetical protein SDJN03_04972, partial [Cucurbita argyrosperma subsp. sororia]9.2e-3375Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV
        MK+VAAYLLAVLGGNTHPS++DI AILGSVG+EV+DERIELL SQVKGKD AE++A GREKMAS+ S GSAIPVAAGG   AAS  VAAEPV EDKKEV 
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV

Query:  EESDEVINFIFF
        EES++ + F  F
Subjt:  EESDEVINFIFF

XP_004143310.2 60S acidic ribosomal protein P2 [Cucumis sativus]8.9e-3680.7Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAG--GAAAAASVVVAAEPVKEDKKE
        MK+VAAYLLA+LGGNTHPSI DIKAIL SVGVE EDERIELL SQVKGKD AELVACGREKMA VP GGSAIPVAAG      AA+ VVAAEPVKEDKKE
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAG--GAAAAASVVVAAEPVKEDKKE

Query:  VVEESDEVINFIFF
        VVEESDE + F  F
Subjt:  VVEESDEVINFIFF

XP_022925971.1 60S acidic ribosomal protein P2-like [Cucurbita moschata]4.1e-3375.89Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV
        MK+VAAYLLAVLGGNTHPS++DI AILGSVG+EVEDERIELL SQVKGKD AE++A GREKMAS+ S GSAIPVAAGG   AAS  VAAEPV EDKKEV 
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV

Query:  EESDEVINFIFF
        EES++ + F  F
Subjt:  EESDEVINFIFF

XP_022977389.1 60S acidic ribosomal protein P2-like [Cucurbita maxima]7.0e-3375.89Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV
        MK+VAAYLLA LGGNTHPS++DI AILGSVG+EVEDERIELL SQVKGKD AE++A GREKMAS+ S GSAIPVAAGG   AAS  VAAEPVKEDKKEV 
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV

Query:  EESDEVINFIFF
        EES++ + F  F
Subjt:  EESDEVINFIFF

XP_023543240.1 60S acidic ribosomal protein P2-2-like [Cucurbita pepo subsp. pepo]1.6e-3275Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV
        MK+VAAYLLAVLGGNTHPS++DI AILGSVG+EVEDERIELL SQVKG+D AE++A GREKMAS+ S GSAIPVAAGG   AAS  VAAEPVKEDKKE  
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV

Query:  EESDEVINFIFF
        EES++ + F  F
Subjt:  EESDEVINFIFF

TrEMBL top hitse value%identityAlignment
A0A0A0KKF6 Uncharacterized protein4.3e-3680.7Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAG--GAAAAASVVVAAEPVKEDKKE
        MK+VAAYLLA+LGGNTHPSI DIKAIL SVGVE EDERIELL SQVKGKD AELVACGREKMA VP GGSAIPVAAG      AA+ VVAAEPVKEDKKE
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAG--GAAAAASVVVAAEPVKEDKKE

Query:  VVEESDEVINFIFF
        VVEESDE + F  F
Subjt:  VVEESDEVINFIFF

A0A1U7YTX1 60S acidic ribosomal protein P2-like4.3e-2868.14Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPS-GGSAIPVAAGGAAAAASVVVAAEPVKEDKKEV
        MKV+AAYLLAVLGGN  PS DD+K ILGSVG E +D+RIELL S+VKGKD  EL+A GREK+ASVPS GG+AI VAAGG  AAA+   AAEP KE+K E 
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPS-GGSAIPVAAGGAAAAASVVVAAEPVKEDKKEV

Query:  VEESDEVINFIFF
         EESDE + F  F
Subjt:  VEESDEVINFIFF

A0A6J1CQB9 60S acidic ribosomal protein P2A-like1.2e-3071.55Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAI----PVAAGGAAAAASVVVAAEPVKEDK
        MK+VAAYLLAVLGGN  PS+D IKAILGSVGVEVED+RIELL SQVKG D AE+VACGREKMAS+P  G+AI    P AAGGAA A + V A    KEDK
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAI----PVAAGGAAAAASVVVAAEPVKEDK

Query:  KEVVEESDEVINFIFF
        KEVVEESDE + F  F
Subjt:  KEVVEESDEVINFIFF

A0A6J1EDL3 60S acidic ribosomal protein P2-like2.0e-3375.89Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV
        MK+VAAYLLAVLGGNTHPS++DI AILGSVG+EVEDERIELL SQVKGKD AE++A GREKMAS+ S GSAIPVAAGG   AAS  VAAEPV EDKKEV 
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV

Query:  EESDEVINFIFF
        EES++ + F  F
Subjt:  EESDEVINFIFF

A0A6J1IM66 60S acidic ribosomal protein P2-like3.4e-3375.89Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV
        MK+VAAYLLA LGGNTHPS++DI AILGSVG+EVEDERIELL SQVKGKD AE++A GREKMAS+ S GSAIPVAAGG   AAS  VAAEPVKEDKKEV 
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV

Query:  EESDEVINFIFF
        EES++ + F  F
Subjt:  EESDEVINFIFF

SwissProt top hitse value%identityAlignment
O24415 60S acidic ribosomal protein P2B1.4e-2353.57Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV
        MKV+AAYLLAVLGGNT P+ DD+K+IL SVG E ++E++E L +++K KD  E++A GRE+++SVPSGG AI + A  A A      A E  KE+K E  
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV

Query:  EESDEVINFIFF
        EESDE + F  F
Subjt:  EESDEVINFIFF

P41099 60S acidic ribosomal protein P21.5e-2558.41Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGS-AIPVAAGGAAAAASVVVAAEPVKEDKKEV
        MKV+AA+LLA+LGGNT P+ +D+K+IL SVG + +D++IELL SQVKGKD  EL+A GRE++ASVPSGG  A+  AAGG    A    A EP KE+K E 
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGS-AIPVAAGGAAAAASVVVAAEPVKEDKKEV

Query:  VEESDEVINFIFF
         EESDE + F  F
Subjt:  VEESDEVINFIFF

P46252 60S acidic ribosomal protein P2A3.1e-2358.93Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV
        MK VAAYLLAVL GN  PS DD+ AIL SVG EV++E++ELL SQ+ GKD  EL+A GREK ASVP GG  + VAA  A AA     AAE  KE+K E  
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV

Query:  EESDEVINFIFF
        EESD+ + F  F
Subjt:  EESDEVINFIFF

Q9LXM8 60S acidic ribosomal protein P2-41.5e-2256.9Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGG----SAIPVAAGGAAAAASVVVAAEPVKEDK
        MKV AA+LLAVLGGN +PS D+IK I+G+VG +V+ E IELL  +V GKD AEL+A GREK+ASVPSGG    SA P + GG AAA +        KE K
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGG----SAIPVAAGGAAAAASVVVAAEPVKEDK

Query:  KEVVEESDEVINFIFF
        KE  EESD+ + F  F
Subjt:  KEVVEESDEVINFIFF

Q9SLF7 60S acidic ribosomal protein P2-21.8e-2358.97Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGS-----AIPVAAGGAAAAASVVVAAEPVKED
        MKVVAAYLLAVL G   P+  DIK ILGSVG E ED +IELL  +VKGKD AEL+A GREK+ASVPSGG      A   + GG    AS   AAE  KE+
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGS-----AIPVAAGGAAAAASVVVAAEPVKED

Query:  KKEVVEESDEVINFIFF
        KKE  EESD+ + F  F
Subjt:  KKEVVEESDEVINFIFF

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family1.3e-2458.97Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGS-----AIPVAAGGAAAAASVVVAAEPVKED
        MKVVAAYLLAVL G   P+  DIK ILGSVG E ED +IELL  +VKGKD AEL+A GREK+ASVPSGG      A   + GG    AS   AAE  KE+
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGS-----AIPVAAGGAAAAASVVVAAEPVKED

Query:  KKEVVEESDEVINFIFF
        KKE  EESD+ + F  F
Subjt:  KKEVVEESDEVINFIFF

AT2G27710.2 60S acidic ribosomal protein family1.3e-2458.97Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGS-----AIPVAAGGAAAAASVVVAAEPVKED
        MKVVAAYLLAVL G   P+  DIK ILGSVG E ED +IELL  +VKGKD AEL+A GREK+ASVPSGG      A   + GG    AS   AAE  KE+
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGS-----AIPVAAGGAAAAASVVVAAEPVKED

Query:  KKEVVEESDEVINFIFF
        KKE  EESD+ + F  F
Subjt:  KKEVVEESDEVINFIFF

AT2G27710.3 60S acidic ribosomal protein family1.3e-2458.97Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGS-----AIPVAAGGAAAAASVVVAAEPVKED
        MKVVAAYLLAVL G   P+  DIK ILGSVG E ED +IELL  +VKGKD AEL+A GREK+ASVPSGG      A   + GG    AS   AAE  KE+
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGS-----AIPVAAGGAAAAASVVVAAEPVKED

Query:  KKEVVEESDEVINFIFF
        KKE  EESD+ + F  F
Subjt:  KKEVVEESDEVINFIFF

AT2G27710.4 60S acidic ribosomal protein family4.9e-2458.04Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV
        MKVVAAYLLAVL G   P+  DIK ILGSVG E ED +IELL  +VKGKD AEL+A GREK+ASVPSGG A                AAE  KE+KKE  
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVV

Query:  EESDEVINFIFF
        EESD+ + F  F
Subjt:  EESDEVINFIFF

AT3G44590.2 60S acidic ribosomal protein family1.1e-2356.9Show/hide
Query:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGG----SAIPVAAGGAAAAASVVVAAEPVKEDK
        MKV AA+LLAVLGGN +PS D+IK I+G+VG +V+ E IELL  +V GKD AEL+A GREK+ASVPSGG    SA P + GG AAA +        KE K
Subjt:  MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGG----SAIPVAAGGAAAAASVVVAAEPVKEDK

Query:  KEVVEESDEVINFIFF
        KE  EESD+ + F  F
Subjt:  KEVVEESDEVINFIFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTTGTTGCGGCTTATTTGTTGGCTGTTTTGGGTGGAAATACTCACCCCTCCATTGATGATATTAAAGCCATTCTCGGCTCTGTTGGAGTTGAGGTTGAAGATGA
AAGAATCGAGTTGCTTTTTTCCCAAGTTAAGGGCAAAGATTTTGCAGAGCTTGTAGCCTGTGGAAGGGAGAAGATGGCATCTGTCCCTTCTGGTGGTTCTGCAATTCCTG
TAGCTGCCGGCGGTGCTGCTGCTGCCGCGTCTGTCGTTGTTGCTGCCGAGCCTGTCAAAGAGGACAAGAAAGAAGTTGTTGAAGAGTCGGATGAAGTAATTAACTTTATT
TTCTTCTTTATTTACTTAACTAATTCATTCATATTTACTTTTATGGTTAAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTTGTTGCGGCTTATTTGTTGGCTGTTTTGGGTGGAAATACTCACCCCTCCATTGATGATATTAAAGCCATTCTCGGCTCTGTTGGAGTTGAGGTTGAAGATGA
AAGAATCGAGTTGCTTTTTTCCCAAGTTAAGGGCAAAGATTTTGCAGAGCTTGTAGCCTGTGGAAGGGAGAAGATGGCATCTGTCCCTTCTGGTGGTTCTGCAATTCCTG
TAGCTGCCGGCGGTGCTGCTGCTGCCGCGTCTGTCGTTGTTGCTGCCGAGCCTGTCAAAGAGGACAAGAAAGAAGTTGTTGAAGAGTCGGATGAAGTAATTAACTTTATT
TTCTTCTTTATTTACTTAACTAATTCATTCATATTTACTTTTATGGTTAAATTGTAA
Protein sequenceShow/hide protein sequence
MKVVAAYLLAVLGGNTHPSIDDIKAILGSVGVEVEDERIELLFSQVKGKDFAELVACGREKMASVPSGGSAIPVAAGGAAAAASVVVAAEPVKEDKKEVVEESDEVINFI
FFFIYLTNSFIFTFMVKL