; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016989 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016989
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S acidic ribosomal protein P2-like
Genome locationChr03:9919629..9922076
RNA-Seq ExpressionHG10016989
SyntenyHG10016989
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025275.1 60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa]1.7e-2982.61Show/hide
Query:  MVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATASTVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE
        MVN+ TVGAEAD EKIELLL++VK KD+TELIACGREKMASLPTG +VAA V A  STVD AAPVAAEAKKEEK+DA+DSDEDICFSLFEDE
Subjt:  MVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATASTVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE

XP_004143377.1 60S acidic ribosomal protein P2 [Cucumis sativus]3.9e-3468.94Show/hide
Query:  VAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATASTVD
        VAAYLLAVLGGNKTPSAQDI TIL+S                    VGAEA+ EKIELL++++K KD+TELIA  REKMASLPTG +VAAAV A  STVD
Subjt:  VAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATASTVD

Query:  VAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE
         AAPV AEAKKEEK+DA+DSDEDICFSLFEDE
Subjt:  VAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE

XP_016902906.1 PREDICTED: 60S acidic ribosomal protein P2-like [Cucumis melo]3.1e-3973.33Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS
        MKVVAAYLLAVLGGNKTPSAQDINTIL                    ++VGAEAD EKIELLL++VK KD+TELIACGREKMASLPTG +VAA V A  S
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS

Query:  TVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE
        TVD AAPVAAEAKKEEK+DA+DSDEDICFSLFEDE
Subjt:  TVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE

XP_022143770.1 60S acidic ribosomal protein P2-2-like [Momordica charantia]6.1e-2759.29Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATA-
        MKVVAAYLLAVLGGN +P+A+DI TILAS                    VGAEA+ EKIELLLSQVK KD+ E++ACGREKMASLP  G+VAAAVG    
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATA-

Query:  ----STVDVAAPVAAEAKKEE-KEDAVDSDEDICFSLFED
            ++   AA  AAEAKKEE KED  DSD+DICF+LF++
Subjt:  ----STVDVAAPVAAEAKKEE-KEDAVDSDEDICFSLFED

XP_034929585.1 60S acidic ribosomal protein P2B-like isoform X1 [Populus alba]1.3e-2453.69Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFF-------FLFSPLP--------LLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASL
        MKVVAAYLLAVLGGN  P+A+D+  IL SG+ F       FLF  L         ++ +V  F VGA+AD ++IELLLS VK KD+TELIA GREK+AS+
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFF-------FLFSPLP--------LLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASL

Query:  PTGGLVAAAVGATASTVDVAAPVAAEAKKEEK-EDAVDSDEDICFSLFE
        P+GG VA A G   +     A  AAEAKKEEK E+  +SD+D+ FSLF+
Subjt:  PTGGLVAAAVGATASTVDVAAPVAAEAKKEEK-EDAVDSDEDICFSLFE

TrEMBL top hitse value%identityAlignment
A0A0A0KEV8 Uncharacterized protein1.9e-3468.94Show/hide
Query:  VAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATASTVD
        VAAYLLAVLGGNKTPSAQDI TIL+S                    VGAEA+ EKIELL++++K KD+TELIA  REKMASLPTG +VAAAV A  STVD
Subjt:  VAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATASTVD

Query:  VAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE
         AAPV AEAKKEEK+DA+DSDEDICFSLFEDE
Subjt:  VAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE

A0A1S4E3U5 60S acidic ribosomal protein P2-like1.5e-3973.33Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS
        MKVVAAYLLAVLGGNKTPSAQDINTIL                    ++VGAEAD EKIELLL++VK KD+TELIACGREKMASLPTG +VAA V A  S
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS

Query:  TVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE
        TVD AAPVAAEAKKEEK+DA+DSDEDICFSLFEDE
Subjt:  TVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE

A0A2C9W0M2 Uncharacterized protein5.2e-2458.21Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS
        MKVVAAYLLAVLGGN +PSA+D+  ILAS                    VGA+AD ++IELLLSQVK KDVTELIA GREK+AS+P+GG VA A  A  +
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS

Query:  TVDVAAPVAAEAKKEEK-EDAVDSDEDICFSLFE
            AA  AAEAKKEEK E+  +SDED+ FSLF+
Subjt:  TVDVAAPVAAEAKKEEK-EDAVDSDEDICFSLFE

A0A5A7SLD3 60S acidic ribosomal protein P2-like8.3e-3082.61Show/hide
Query:  MVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATASTVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE
        MVN+ TVGAEAD EKIELLL++VK KD+TELIACGREKMASLPTG +VAA V A  STVD AAPVAAEAKKEEK+DA+DSDEDICFSLFEDE
Subjt:  MVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATASTVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFEDE

A0A6J1CPQ6 60S acidic ribosomal protein P2-2-like3.0e-2759.29Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATA-
        MKVVAAYLLAVLGGN +P+A+DI TILAS                    VGAEA+ EKIELLLSQVK KD+ E++ACGREKMASLP  G+VAAAVG    
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATA-

Query:  ----STVDVAAPVAAEAKKEE-KEDAVDSDEDICFSLFED
            ++   AA  AAEAKKEE KED  DSD+DICF+LF++
Subjt:  ----STVDVAAPVAAEAKKEE-KEDAVDSDEDICFSLFED

SwissProt top hitse value%identityAlignment
O24415 60S acidic ribosomal protein P2B9.5e-2350.75Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS
        MKV+AAYLLAVLGGN +P+A D+ +IL S                    VGAEAD EK+E LL+++KDKD+TE+IA GRE+++S+P+GG  A  +GA A+
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS

Query:  TVDVAAPVAAEAKKEEK-EDAVDSDEDICFSLFE
             A  A EAKKEEK E+  +SDED+ FSLF+
Subjt:  TVDVAAPVAAEAKKEEK-EDAVDSDEDICFSLFE

P41099 60S acidic ribosomal protein P21.5e-2351.49Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS
        MKV+AA+LLA+LGGN +P+ +D+ +ILAS                    VGA+AD +KIELLLSQVK KD+TELIA GRE++AS+P+GG VA A  A   
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS

Query:  TVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFED
          D  A  A E KKEEK +  +SDE++ FSLF+D
Subjt:  TVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFED

P46252 60S acidic ribosomal protein P2A1.8e-2153.73Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS
        MK VAAYLLAVL GN +PSA D+  IL S                    VG E D+EK+ELLLSQ+  KD+TELIA GREK AS+P GG    AV A A 
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS

Query:  TVDVAAPVAAEAKKEEK-EDAVDSDEDICFSLFE
            AAP AAEAKKEEK E+  +SD+D+ FSLF+
Subjt:  TVDVAAPVAAEAKKEEK-EDAVDSDEDICFSLFE

Q9LXM8 60S acidic ribosomal protein P2-42.8e-1948.51Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS
        MKV AA+LLAVLGGN  PSA +I  I+ +                    VGA+ D E IELLL +V  KD+ ELIA GREK+AS+P+GG VA +   ++ 
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS

Query:  TVDVAAPV-AAEAKKEEKEDAVDSDEDICFSLFE
            AAP    EAKKEEKE   +SD+D+ FSLFE
Subjt:  TVDVAAPV-AAEAKKEEKEDAVDSDEDICFSLFE

Q9SLF7 60S acidic ribosomal protein P2-28.3e-1949.63Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAV-GATA
        MKVVAAYLLAVL G  +P++ DI TIL S                    VGAE +  +IELLL +VK KD+ ELIA GREK+AS+P+GG    AV  AT+
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAV-GATA

Query:  STVDVAAPVAAEAKKEE-KEDAVDSDEDICFSLFE
                 AAE+KKEE KE+  +SD+D+ FSLFE
Subjt:  STVDVAAPVAAEAKKEE-KEDAVDSDEDICFSLFE

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family5.9e-2049.63Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAV-GATA
        MKVVAAYLLAVL G  +P++ DI TIL S                    VGAE +  +IELLL +VK KD+ ELIA GREK+AS+P+GG    AV  AT+
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAV-GATA

Query:  STVDVAAPVAAEAKKEE-KEDAVDSDEDICFSLFE
                 AAE+KKEE KE+  +SD+D+ FSLFE
Subjt:  STVDVAAPVAAEAKKEE-KEDAVDSDEDICFSLFE

AT2G27710.2 60S acidic ribosomal protein family5.9e-2049.63Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAV-GATA
        MKVVAAYLLAVL G  +P++ DI TIL S                    VGAE +  +IELLL +VK KD+ ELIA GREK+AS+P+GG    AV  AT+
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAV-GATA

Query:  STVDVAAPVAAEAKKEE-KEDAVDSDEDICFSLFE
                 AAE+KKEE KE+  +SD+D+ FSLFE
Subjt:  STVDVAAPVAAEAKKEE-KEDAVDSDEDICFSLFE

AT2G27720.3 60S acidic ribosomal protein family2.0e-2047.41Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPT--GGLVAAAVGAT
        MKVVAA+LLAVL G  +P+  DI  IL SG        + +L +  +  VGAE +  +IELLL +VK KD+ ELIA GREK+AS+P+  GG VA A   +
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPT--GGLVAAAVGAT

Query:  ASTVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFE
               AP A   K+E+KE+  +SD+D+ FSLFE
Subjt:  ASTVDVAAPVAAEAKKEEKEDAVDSDEDICFSLFE

AT3G44590.1 60S acidic ribosomal protein family2.0e-2048.51Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS
        MKV AA+LLAVLGGN  PSA +I  I+ +                    VGA+ D E IELLL +V  KD+ ELIA GREK+AS+P+GG VA +   ++ 
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS

Query:  TVDVAAPV-AAEAKKEEKEDAVDSDEDICFSLFE
            AAP    EAKKEEKE   +SD+D+ FSLFE
Subjt:  TVDVAAPV-AAEAKKEEKEDAVDSDEDICFSLFE

AT3G44590.2 60S acidic ribosomal protein family2.0e-2048.51Show/hide
Query:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS
        MKV AA+LLAVLGGN  PSA +I  I+ +                    VGA+ D E IELLL +V  KD+ ELIA GREK+AS+P+GG VA +   ++ 
Subjt:  MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATAS

Query:  TVDVAAPV-AAEAKKEEKEDAVDSDEDICFSLFE
            AAP    EAKKEEKE   +SD+D+ FSLFE
Subjt:  TVDVAAPV-AAEAKKEEKEDAVDSDEDICFSLFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCTTCTGCTCAAGATATCAACACCATTCTCGCCTCTGGTTCTTTCTTTTTTCTCTTCTC
TCCTCTTCCTCTATTGTCAATGGTTAACATGTTCACAGTTGGAGCTGAAGCTGACCATGAAAAGATTGAGCTGCTTCTTTCTCAAGTTAAGGACAAGGATGTAACTGAGC
TTATTGCCTGTGGGAGAGAGAAGATGGCATCATTACCTACCGGTGGCCTCGTTGCAGCTGCTGTGGGCGCAACGGCCTCTACCGTCGATGTTGCTGCTCCTGTTGCAGCT
GAGGCTAAGAAAGAGGAGAAAGAAGATGCTGTGGACTCTGATGAAGACATTTGTTTCTCTCTATTTGAAGATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCTTCTGCTCAAGATATCAACACCATTCTCGCCTCTGGTTCTTTCTTTTTTCTCTTCTC
TCCTCTTCCTCTATTGTCAATGGTTAACATGTTCACAGTTGGAGCTGAAGCTGACCATGAAAAGATTGAGCTGCTTCTTTCTCAAGTTAAGGACAAGGATGTAACTGAGC
TTATTGCCTGTGGGAGAGAGAAGATGGCATCATTACCTACCGGTGGCCTCGTTGCAGCTGCTGTGGGCGCAACGGCCTCTACCGTCGATGTTGCTGCTCCTGTTGCAGCT
GAGGCTAAGAAAGAGGAGAAAGAAGATGCTGTGGACTCTGATGAAGACATTTGTTTCTCTCTATTTGAAGATGAGTAA
Protein sequenceShow/hide protein sequence
MKVVAAYLLAVLGGNKTPSAQDINTILASGSFFFLFSPLPLLSMVNMFTVGAEADHEKIELLLSQVKDKDVTELIACGREKMASLPTGGLVAAAVGATASTVDVAAPVAA
EAKKEEKEDAVDSDEDICFSLFEDE