; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017019 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017019
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionBeta-galactosidase
Genome locationChr03:10228536..10229735
RNA-Seq ExpressionHG10017019
SyntenyHG10017019
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0048046 - apoplast (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35
IPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8011597.1 hypothetical protein BT93_J2015 [Corymbia citriodora subsp. variegata]1.2e-1554.95Show/hide
Query:  MGWMRNFAFLN--CVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
        MGW       N   VVLAL +  +  + SVSYD RA+ I+G+R+I+ISGSIHY RSTPE   +KFT  IVN MK   LF SQGGPII++Q+
Subjt:  MGWMRNFAFLN--CVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

KAG0537974.1 hypothetical protein BDA96_03G195400 [Sorghum bicolor]1.4e-1457.83Show/hide
Query:  LALPLL---------SSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQ
        +ALPLL         + A   +V+Y+ RA+ IDG+R+II+SGSIHY RSTP+ E E FTTLIVNKMK   +FA QGGPII+AQ
Subjt:  LALPLL---------SSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQ

XP_016902878.1 PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis melo]3.8e-1738.46Show/hide
Query:  MGWMRNFAFLNCV--VLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE-----------------------------------------
        MGW  NF FLN V  +LALP+LSSAKK S SYDGRALKI+G+RKIIISGSIHY  STPE                                         
Subjt:  MGWMRNFAFLNCV--VLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE-----------------------------------------

Query:  --------------------------------------------------DETEKFTTLIVNKMKVNELFASQGGPIIVAQL
                                                          DE EKFT+LIVNKM+ N+LFASQGGPII+AQ+
Subjt:  --------------------------------------------------DETEKFTTLIVNKMKVNELFASQGGPIIVAQL

XP_033131906.1 beta-galactosidase 15-like [Brassica rapa]1.8e-1464.52Show/hide
Query:  VSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
        VS+DGRA+ IDG R++++SGSIHY RSTPEDE + FTT+IV+ +K  +LFA QGGPII+AQ+
Subjt:  VSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

XP_038882297.1 beta-galactosidase 15-like [Benincasa hispida]3.9e-2242.54Show/hide
Query:  MGWMRNFAFLNCVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE-------------------------------------------
        MGW  NF  LNCVVLAL +LSSAKK+SVSYDGRALKIDGERKIIISGSIHY RSTPE                                           
Subjt:  MGWMRNFAFLNCVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE-------------------------------------------

Query:  -------------------------------------------------DETEKFTTLIVNKMKVNELFASQGGPIIVAQL
                                                         DE EKFTT IVNKMK NELFASQGGPIIVAQ+
Subjt:  -------------------------------------------------DETEKFTTLIVNKMKVNELFASQGGPIIVAQL

TrEMBL top hitse value%identityAlignment
A0A1S3AYN3 Beta-galactosidase8.6e-1535.8Show/hide
Query:  NFAFLNCVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTP-------------------------------------------------
        +F  LNC +L+  LLSSAKK+SV+YDGRALKI+GERKIIISG+IHY RS+P                                                 
Subjt:  NFAFLNCVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTP-------------------------------------------------

Query:  -------------------------------------------EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
                                                   +DE  KFTTLIVNKM+ N+LFASQGGPIIVAQ+
Subjt:  -------------------------------------------EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

A0A1S4E3S3 Beta-galactosidase1.8e-1738.46Show/hide
Query:  MGWMRNFAFLNCV--VLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE-----------------------------------------
        MGW  NF FLN V  +LALP+LSSAKK S SYDGRALKI+G+RKIIISGSIHY  STPE                                         
Subjt:  MGWMRNFAFLNCV--VLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE-----------------------------------------

Query:  --------------------------------------------------DETEKFTTLIVNKMKVNELFASQGGPIIVAQL
                                                          DE EKFT+LIVNKM+ N+LFASQGGPII+AQ+
Subjt:  --------------------------------------------------DETEKFTTLIVNKMKVNELFASQGGPIIVAQL

A0A5J5W147 Beta-galactosidase3.0e-1261.29Show/hide
Query:  VSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
        V+YDGR+L I+G+RK++ SGSIHY RSTP+   + FTT IVN MK   L+ASQGGPII++Q+
Subjt:  VSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

A0A5J5W2F1 Beta-galactosidase3.0e-1261.29Show/hide
Query:  VSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
        V+YDGR+L I+G+RK++ SGSIHY RSTP+   + FTT IVN MK   L+ASQGGPII++Q+
Subjt:  VSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

A0A6J1HHP0 Beta-galactosidase1.0e-1233.7Show/hide
Query:  MGWMRNFAFLNCV---VLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE----------------------------------------
        M +  +   LNC+   +LAL L SSA+K+SVSYDGRAL I+G+RKIIISGSIHY RSTPE                                        
Subjt:  MGWMRNFAFLNCV---VLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE----------------------------------------

Query:  ----------------------------------------------------DETEKFTTLIVNKMKVNELFASQGGPIIVAQL
                                                            DE EKF+T+I+N MK  ELFASQGGPII+AQ+
Subjt:  ----------------------------------------------------DETEKFTTLIVNKMKVNELFASQGGPIIVAQL

SwissProt top hitse value%identityAlignment
Q7G3T8 Beta-galactosidase 131.1e-0628.49Show/hide
Query:  VVLALPLLSSAKKV---SVSYDGRALKIDGERKIIISGSIHYSRSTP-----------------------------------------------------
        V L + +L+ A  V   +V+Y+ R+L IDGER+IIISGSIHY RSTP                                                     
Subjt:  VVLALPLLSSAKKV---SVSYDGRALKIDGERKIIISGSIHYSRSTP-----------------------------------------------------

Query:  ---------------------------------------EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
                                               E+E E FTTLI+NKMK   +FA QGGPII+AQ+
Subjt:  ---------------------------------------EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

Q7XFK2 Beta-galactosidase 146.3e-0756Show/hide
Query:  CVVLALPLLSSAKK----VSVSYDGRALKIDGERKIIISGSIHYSRSTPE
        C+ + L +L++A        VSYDGR+L +DGER+I+ISGSIHY RSTPE
Subjt:  CVVLALPLLSSAKK----VSVSYDGRALKIDGERKIIISGSIHYSRSTPE

Q7XFK2 Beta-galactosidase 141.5e-0363.64Show/hide
Query:  EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
        E+  E FTTLIV KMK   +FA QGGPII+AQ+
Subjt:  EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

Q8RUV9 Beta-galactosidase 11.3e-0729.68Show/hide
Query:  SVSYDGRALKIDGERKIIISGSIHYSRSTP----------------------------------------------------------------------
        SVSYD R+L IDG+R+II+SGSIHY RSTP                                                                      
Subjt:  SVSYDGRALKIDGERKIIISGSIHYSRSTP----------------------------------------------------------------------

Query:  ----------------------EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
                              E+E E FTTLIVNKMK +++FA QGGPII+AQ+
Subjt:  ----------------------EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

Q9SCV4 Beta-galactosidase 82.8e-0757.78Show/hide
Query:  VVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE
        ++L L ++ +A   +V+YD RAL IDG+RK++ISGSIHY RSTPE
Subjt:  VVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE

Q9SCV4 Beta-galactosidase 84.3e-0354.55Show/hide
Query:  EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
        ++E ++FTT IV+ MK  +L+ASQGGPII++Q+
Subjt:  EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

Q9SCV8 Beta-galactosidase 43.7e-0752.73Show/hide
Query:  NFAFLNCVVLALPL---LSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE
        NF   +C+ LA+     LS   K SVSYD +A+ I+G+R+I++SGSIHY RSTPE
Subjt:  NFAFLNCVVLALPL---LSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE

Arabidopsis top hitse value%identityAlignment
AT1G77410.1 beta-galactosidase 161.0e-0744.44Show/hide
Query:  MRNFAFLNCVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE
        M  F +    ++ + ++ +    +V+YDGR+L IDGE KI+ SGSIHY+RSTP+
Subjt:  MRNFAFLNCVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE

AT2G28470.1 beta-galactosidase 82.0e-0857.78Show/hide
Query:  VVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE
        ++L L ++ +A   +V+YD RAL IDG+RK++ISGSIHY RSTPE
Subjt:  VVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE

AT2G28470.1 beta-galactosidase 83.0e-0454.55Show/hide
Query:  EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
        ++E ++FTT IV+ MK  +L+ASQGGPII++Q+
Subjt:  EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

AT2G28470.2 beta-galactosidase 82.0e-0857.78Show/hide
Query:  VVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE
        ++L L ++ +A   +V+YD RAL IDG+RK++ISGSIHY RSTPE
Subjt:  VVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE

AT2G28470.2 beta-galactosidase 83.0e-0454.55Show/hide
Query:  EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL
        ++E ++FTT IV+ MK  +L+ASQGGPII++Q+
Subjt:  EDETEKFTTLIVNKMKVNELFASQGGPIIVAQL

AT3G52840.1 beta-galactosidase 21.3e-0749.06Show/hide
Query:  RNFAFLNCVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE
        RN A++   +L    L  + +  V+YD +AL I+G+R+I+ISGSIHY RSTPE
Subjt:  RNFAFLNCVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE

AT3G52840.1 beta-galactosidase 21.3e-0255.17Show/hide
Query:  EKFTTLIVNKMKVNELFASQGGPIIVAQL
        +KFT  IV+ MK  +LF +QGGPII++Q+
Subjt:  EKFTTLIVNKMKVNELFASQGGPIIVAQL

AT5G56870.1 beta-galactosidase 42.6e-0852.73Show/hide
Query:  NFAFLNCVVLALPL---LSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE
        NF   +C+ LA+     LS   K SVSYD +A+ I+G+R+I++SGSIHY RSTPE
Subjt:  NFAFLNCVVLALPL---LSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGATGAGAAATTTTGCATTCTTAAACTGTGTCGTTTTGGCATTGCCCTTACTTTCTTCTGCAAAGAAAGTTTCAGTTTCCTATGATGGAAGAGCTCTAAAGAT
TGATGGAGAAAGAAAAATTATAATTTCTGGTTCTATCCATTATTCTCGTAGCACTCCTGAAGATGAGACGGAAAAATTCACCACATTAATAGTAAACAAAATGAAGGTTA
ATGAGCTATTTGCATCACAAGGAGGACCCATCATCGTCGCCCAGTTAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGATGAGAAATTTTGCATTCTTAAACTGTGTCGTTTTGGCATTGCCCTTACTTTCTTCTGCAAAGAAAGTTTCAGTTTCCTATGATGGAAGAGCTCTAAAGAT
TGATGGAGAAAGAAAAATTATAATTTCTGGTTCTATCCATTATTCTCGTAGCACTCCTGAAGATGAGACGGAAAAATTCACCACATTAATAGTAAACAAAATGAAGGTTA
ATGAGCTATTTGCATCACAAGGAGGACCCATCATCGTCGCCCAGTTAAATTAA
Protein sequenceShow/hide protein sequence
MGWMRNFAFLNCVVLALPLLSSAKKVSVSYDGRALKIDGERKIIISGSIHYSRSTPEDETEKFTTLIVNKMKVNELFASQGGPIIVAQLN