; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017037 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017037
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase RZFP34-like
Genome locationChr03:10508029..10508954
RNA-Seq ExpressionHG10017037
SyntenyHG10017037
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR008913 - Zinc finger, CHY-type
IPR017921 - Zinc finger, CTCHY-type
IPR037274 - Zinc finger, CHY-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063794.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]5.1e-5386.73Show/hide
Query:  MECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCMGK
        MEC MEAWISPNGD S IDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK           VRQ+CIQCGVCMGK
Subjt:  MECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCMGK

Query:  YFCAKCKFFDDDV
        YFCAKCKFFDDDV
Subjt:  YFCAKCKFFDDDV

TYK07331.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]1.3e-5386.09Show/hide
Query:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM
        M MEC MEAWISPNGD S IDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK           VRQ+CIQCGVCM
Subjt:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM

Query:  GKYFCAKCKFFDDDV
        GKYFCAKCKFFDDDV
Subjt:  GKYFCAKCKFFDDDV

XP_004143281.1 E3 ubiquitin-protein ligase RZFP34 isoform X1 [Cucumis sativus]1.1e-5285.22Show/hide
Query:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM
        M MEC MEAWISPNGD S IDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPR DMEK           VRQ+CIQCGVCM
Subjt:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM

Query:  GKYFCAKCKFFDDDV
        GKYFCAKCKFFDDDV
Subjt:  GKYFCAKCKFFDDDV

XP_008462499.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]7.4e-5284.35Show/hide
Query:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM
        M MEC MEAWISPNGD S IDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSL VDPLLRHDIPRHDMEK           VRQ+CIQC VCM
Subjt:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM

Query:  GKYFCAKCKFFDDDV
        GKYFCAKCKFFDDDV
Subjt:  GKYFCAKCKFFDDDV

XP_038882721.1 E3 ubiquitin-protein ligase RZFP34-like [Benincasa hispida]1.6e-5486.96Show/hide
Query:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM
        M  ECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIF CRHCHNEAKNSLDVDPLLRHDIPRHDMEK           VRQHCIQCGVCM
Subjt:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM

Query:  GKYFCAKCKFFDDDV
        G+YFCAKCKFFDDDV
Subjt:  GKYFCAKCKFFDDDV

TrEMBL top hitse value%identityAlignment
A0A0A0KIG3 Uncharacterized protein5.5e-5385.22Show/hide
Query:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM
        M MEC MEAWISPNGD S IDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPR DMEK           VRQ+CIQCGVCM
Subjt:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM

Query:  GKYFCAKCKFFDDDV
        GKYFCAKCKFFDDDV
Subjt:  GKYFCAKCKFFDDDV

A0A1S3CHL2 E3 ubiquitin-protein ligase MIEL1-like3.6e-5284.35Show/hide
Query:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM
        M MEC MEAWISPNGD S IDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSL VDPLLRHDIPRHDMEK           VRQ+CIQC VCM
Subjt:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM

Query:  GKYFCAKCKFFDDDV
        GKYFCAKCKFFDDDV
Subjt:  GKYFCAKCKFFDDDV

A0A5A7V9A0 E3 ubiquitin-protein ligase MIEL1-like2.5e-5386.73Show/hide
Query:  MECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCMGK
        MEC MEAWISPNGD S IDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK           VRQ+CIQCGVCMGK
Subjt:  MECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCMGK

Query:  YFCAKCKFFDDDV
        YFCAKCKFFDDDV
Subjt:  YFCAKCKFFDDDV

A0A5D3C611 E3 ubiquitin-protein ligase MIEL1-like6.5e-5486.09Show/hide
Query:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM
        M MEC MEAWISPNGD S IDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK           VRQ+CIQCGVCM
Subjt:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM

Query:  GKYFCAKCKFFDDDV
        GKYFCAKCKFFDDDV
Subjt:  GKYFCAKCKFFDDDV

A0A6J1HG84 E3 ubiquitin-protein ligase RZFP34-like6.1e-5282.61Show/hide
Query:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM
        M +E GMEAWIS NG+KSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDP LRHDIPRHD+EK           V+QHCIQCGVCM
Subjt:  MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCM

Query:  GKYFCAKCKFFDDDV
        GKYFC+KCKFFDDDV
Subjt:  GKYFCAKCKFFDDDV

SwissProt top hitse value%identityAlignment
O14099 Uncharacterized RING finger protein C2F3.168.3e-1437.78Show/hide
Query:  DKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPR--HDMEKVRQHCIQCGVCMGKYFCAKCKFFDDD
        +K+  D      GCSHY R CK++   C+E + CRHCHN+A + +   P + + +      ++   Q+C  C  CMG+Y+C KCK +DDD
Subjt:  DKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPR--HDMEKVRQHCIQCGVCMGKYFCAKCKFFDDD

Q10LI1 E3 ubiquitin-protein ligase SRFP14.0e-2451Show/hide
Query:  DKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCMGKYFCAKCKFFDDDV
        D S    G   FGC HYRRRC+IRAPCCN++F CRHCHNE+           H++ RH +E            V Q C  CGVCMG+YFC+ CKFFDDDV
Subjt:  DKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCMGKYFCAKCKFFDDDV

Q5JL96 Probable E3 ubiquitin-protein ligase RZFP348.0e-3359Show/hide
Query:  DKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDM-----------EKVRQHCIQCGVCMGKYFCAKCKFFDDDV
        D   ++ G   +GC+HYRRRC+IRAPCCNEIFDCRHCHNE KNS+ +D + RH++PRH++           ++VRQ CI CGVCMGKYFC  CK FDDDV
Subjt:  DKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDM-----------EKVRQHCIQCGVCMGKYFCAKCKFFDDDV

Q8VZK0 E3 ubiquitin-protein ligase MIEL11.3e-2250Show/hide
Query:  MEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEKV-----------RQHCIQCGVCMGKYFCA
        MEA  SPN     +  G   FGC HY+RRC+IRAPCCNE+FDCRHCHNE+ ++L  +   RHD+ R D+++V            Q C  CGV MG+YFC+
Subjt:  MEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEKV-----------RQHCIQCGVCMGKYFCA

Query:  KCKFFDDD
         C F+DDD
Subjt:  KCKFFDDD

Q9FFB6 E3 ubiquitin-protein ligase RZFP341.5e-3462.24Show/hide
Query:  SLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCMGKYFCAKCKFFDDDV
        +L+++G G +GCSHYRRRCKIRAPCC+EIFDCRHCHNEAK+SL ++   RH++PRH++ K           V+Q+C  CGVCMGKYFC+KCKFFDDD+
Subjt:  SLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCMGKYFCAKCKFFDDDV

Arabidopsis top hitse value%identityAlignment
AT5G22920.1 CHY-type/CTCHY-type/RING-type Zinc finger protein1.0e-3562.24Show/hide
Query:  SLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCMGKYFCAKCKFFDDDV
        +L+++G G +GCSHYRRRCKIRAPCC+EIFDCRHCHNEAK+SL ++   RH++PRH++ K           V+Q+C  CGVCMGKYFC+KCKFFDDD+
Subjt:  SLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEK-----------VRQHCIQCGVCMGKYFCAKCKFFDDDV

AT5G25560.1 CHY-type/CTCHY-type/RING-type Zinc finger protein1.7e-3059.38Show/hide
Query:  LIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDME-----------KVRQHCIQCGVCMGKYFCAKCKFFDDD
        ++D G   +GC HYRRRC IRAPCCNEIF C HCH EAKN+++VD   RHDIPRH +E           +V Q CI CGVCMGKYFC  CK +DDD
Subjt:  LIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDME-----------KVRQHCIQCGVCMGKYFCAKCKFFDDD

AT5G25560.2 CHY-type/CTCHY-type/RING-type Zinc finger protein1.7e-3059.38Show/hide
Query:  LIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDME-----------KVRQHCIQCGVCMGKYFCAKCKFFDDD
        ++D G   +GC HYRRRC IRAPCCNEIF C HCH EAKN+++VD   RHDIPRH +E           +V Q CI CGVCMGKYFC  CK +DDD
Subjt:  LIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDME-----------KVRQHCIQCGVCMGKYFCAKCKFFDDD

AT5G25560.3 CHY-type/CTCHY-type/RING-type Zinc finger protein2.5e-2953.77Show/hide
Query:  LIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDME---------------------KVRQHCIQCGVCMGKYFCAKC
        ++D G   +GC HYRRRC IRAPCCNEIF C HCH EAKN+++VD   RHDIPRH +E                     +V Q CI CGVCMGKYFC  C
Subjt:  LIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDME---------------------KVRQHCIQCGVCMGKYFCAKC

Query:  KFFDDD
        K +DDD
Subjt:  KFFDDD

AT5G25560.4 CHY-type/CTCHY-type/RING-type Zinc finger protein3.3e-2659.77Show/hide
Query:  GCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDME-----------KVRQHCIQCGVCMGKYFCAKCKFFDDD
        G   Y RRC IRAPCCNEIF C HCH EAKN+++VD   RHDIPRH +E           +V Q CI CGVCMGKYFC  CK +DDD
Subjt:  GCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDME-----------KVRQHCIQCGVCMGKYFCAKCKFFDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATGGAGTGCGGAATGGAGGCTTGGATTTCCCCAAATGGCGATAAGTCTTTGATCGATCTCGGATATGGCAGCTTCGGGTGTTCTCATTATAGAAGGAGGTGTAA
GATCAGAGCTCCTTGTTGCAATGAAATTTTTGATTGCAGACATTGTCACAATGAAGCAAAGAATTCATTAGATGTGGATCCTCTCTTACGCCACGACATTCCTCGCCATG
ATATGGAAAAAGTGCGACAACATTGTATTCAATGTGGAGTTTGTATGGGGAAGTACTTTTGTGCAAAGTGCAAGTTCTTCGATGACGATGTAGGCTTCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGATGGAGTGCGGAATGGAGGCTTGGATTTCCCCAAATGGCGATAAGTCTTTGATCGATCTCGGATATGGCAGCTTCGGGTGTTCTCATTATAGAAGGAGGTGTAA
GATCAGAGCTCCTTGTTGCAATGAAATTTTTGATTGCAGACATTGTCACAATGAAGCAAAGAATTCATTAGATGTGGATCCTCTCTTACGCCACGACATTCCTCGCCATG
ATATGGAAAAAGTGCGACAACATTGTATTCAATGTGGAGTTTGTATGGGGAAGTACTTTTGTGCAAAGTGCAAGTTCTTCGATGACGATGTAGGCTTCTATTGA
Protein sequenceShow/hide protein sequence
MTMECGMEAWISPNGDKSLIDLGYGSFGCSHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLDVDPLLRHDIPRHDMEKVRQHCIQCGVCMGKYFCAKCKFFDDDVGFY