; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017038 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017038
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase RZFP34-like
Genome locationChr03:10509534..10510176
RNA-Seq ExpressionHG10017038
SyntenyHG10017038
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR018957 - Zinc finger, C3HC4 RING-type
IPR039512 - RCHY1, zinc-ribbon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595218.1 Aquaporin TIP1-1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-6198.23Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
        +SDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKC+KCKSYNTRLTQGG
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG

Query:  PSSCSPRIAQIVR
        PSSCSPRIAQIVR
Subjt:  PSSCSPRIAQIVR

XP_004143281.1 E3 ubiquitin-protein ligase RZFP34 isoform X1 [Cucumis sativus]2.9e-62100Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
        MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG

Query:  PSSCSPRIAQIVR
        PSSCSPRIAQIVR
Subjt:  PSSCSPRIAQIVR

XP_008462499.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]2.9e-62100Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
        MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG

Query:  PSSCSPRIAQIVR
        PSSCSPRIAQIVR
Subjt:  PSSCSPRIAQIVR

XP_023517345.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RZFP34-like [Cucurbita pepo subsp. pepo]1.4e-6198.23Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
        MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCD+SSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKC+KCKSYNTRLTQGG
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG

Query:  PSSCSPRIAQIVR
        PSSCSPRIAQIVR
Subjt:  PSSCSPRIAQIVR

XP_031743612.1 E3 ubiquitin-protein ligase RZFP34 isoform X2 [Cucumis sativus]2.9e-62100Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
        MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG

Query:  PSSCSPRIAQIVR
        PSSCSPRIAQIVR
Subjt:  PSSCSPRIAQIVR

TrEMBL top hitse value%identityAlignment
A0A0A0KIG3 Uncharacterized protein1.4e-62100Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
        MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG

Query:  PSSCSPRIAQIVR
        PSSCSPRIAQIVR
Subjt:  PSSCSPRIAQIVR

A0A1S3CHL2 E3 ubiquitin-protein ligase MIEL1-like1.4e-62100Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
        MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG

Query:  PSSCSPRIAQIVR
        PSSCSPRIAQIVR
Subjt:  PSSCSPRIAQIVR

A0A5A7V9A0 E3 ubiquitin-protein ligase MIEL1-like1.5e-6199.12Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
        MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQ KMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG

Query:  PSSCSPRIAQIVR
        PSSCSPRIAQIVR
Subjt:  PSSCSPRIAQIVR

A0A6J1HG84 E3 ubiquitin-protein ligase RZFP34-like2.6e-6197.35Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
        +SDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTP+PQMYQHKMVWILCNDCSEISEVNYHIVAHKC+KCKSYNTRLTQGG
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG

Query:  PSSCSPRIAQIVR
        PSSCSPRIAQIVR
Subjt:  PSSCSPRIAQIVR

A0A6J1I9L5 E3 ubiquitin-protein ligase RZFP34-like2.0e-6198.23Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG
        MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMY HKMVWILCNDCSEISEVNYHIVAHKC+KCKSYNTRLTQGG
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGG

Query:  PSSCSPRIAQIVR
        PSSCSPRIAQIVR
Subjt:  PSSCSPRIAQIVR

SwissProt top hitse value%identityAlignment
Q5JL96 Probable E3 ubiquitin-protein ligase RZFP342.1e-3160.64Show/hide
Query:  SDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTR
        +D+SVLPCGHTIH++C++EME+  Q+ CP+CSKS CDMS  WE+LD E+A+  +     +KMV ILCNDC   SEV +H++AHKC KCKSYNTR
Subjt:  SDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTR

Q8VZK0 E3 ubiquitin-protein ligase MIEL11.3e-2851.58Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTR
        + D +V+ CGHT+H+EC  EM +R ++ CP+CS+S  DMS  W++LD E+ +T MP  Y+ K VWILCNDC++ +EV++HI+  KC  C+SYNTR
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTR

Q96PM5 RING finger and CHY zinc finger domain-containing protein 12.5e-2151.06Show/hide
Query:  VLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQG
        VLPCGH +H  C +EM +   Y CP+C  S  DM+  W +LD EVA TPMP  YQ+  V ILCNDC+  S V +HI+  KC  C+SYNT    G
Subjt:  VLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQG

Q9CR50 RING finger and CHY zinc finger domain-containing protein 15.7e-2151.06Show/hide
Query:  VLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQG
        VLPCGH +H  C +EM +   Y CP+C  S  DM+  W +LD EVA TPMP  YQ+  V ILCNDC+  S V +HI+  KC  C SYNT    G
Subjt:  VLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQG

Q9FFB6 E3 ubiquitin-protein ligase RZFP345.1e-3861.61Show/hide
Query:  DISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGGPS
        DI+VL CGHT+HLEC K+M    +YTCPVCSKS CDMS++W+KLD EVA+ PMP+MY++KMVWILCNDC   + V +H++AHKC  C SYNTR TQ G  
Subjt:  DISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGGPS

Query:  --SCSPRIAQIV
          SCS  + Q+V
Subjt:  --SCSPRIAQIV

Arabidopsis top hitse value%identityAlignment
AT5G18650.1 CHY-type/CTCHY-type/RING-type Zinc finger protein9.0e-3051.58Show/hide
Query:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTR
        + D +V+ CGHT+H+EC  EM +R ++ CP+CS+S  DMS  W++LD E+ +T MP  Y+ K VWILCNDC++ +EV++HI+  KC  C+SYNTR
Subjt:  MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTR

AT5G22920.1 CHY-type/CTCHY-type/RING-type Zinc finger protein3.6e-3961.61Show/hide
Query:  DISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGGPS
        DI+VL CGHT+HLEC K+M    +YTCPVCSKS CDMS++W+KLD EVA+ PMP+MY++KMVWILCNDC   + V +H++AHKC  C SYNTR TQ G  
Subjt:  DISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGGPS

Query:  --SCSPRIAQIV
          SCS  + Q+V
Subjt:  --SCSPRIAQIV

AT5G25560.1 CHY-type/CTCHY-type/RING-type Zinc finger protein1.5e-3764.29Show/hide
Query:  SDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQG
        +D++VLPCGHTIH +C++EM    QY CP+CSKS CDMS VWEK D E+A+TPMP+ YQ++MV ILCNDC + +EV YH+VA KC  CKSYNTR T+G
Subjt:  SDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQG

AT5G25560.3 CHY-type/CTCHY-type/RING-type Zinc finger protein1.5e-3764.29Show/hide
Query:  SDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQG
        +D++VLPCGHTIH +C++EM    QY CP+CSKS CDMS VWEK D E+A+TPMP+ YQ++MV ILCNDC + +EV YH+VA KC  CKSYNTR T+G
Subjt:  SDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQG

AT5G25560.4 CHY-type/CTCHY-type/RING-type Zinc finger protein1.5e-3764.29Show/hide
Query:  SDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQG
        +D++VLPCGHTIH +C++EM    QY CP+CSKS CDMS VWEK D E+A+TPMP+ YQ++MV ILCNDC + +EV YH+VA KC  CKSYNTR T+G
Subjt:  SDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGACATTTCCGTTTTGCCATGTGGACACACTATTCATTTAGAATGTGTGAAGGAGATGGAGCAACGCTTACAATACACATGCCCTGTTTGCTCAAAATCCTATTG
CGATATGTCGAGCGTGTGGGAGAAACTAGATCATGAGGTCGCATCGACGCCGATGCCACAAATGTACCAACATAAAATGGTTTGGATTCTCTGTAATGACTGTAGTGAGA
TATCAGAGGTTAATTATCACATTGTGGCACACAAGTGCCTGAAATGCAAGTCCTATAATACAAGGCTGACCCAAGGAGGGCCCTCTTCATGTTCACCAAGGATTGCTCAA
ATAGTGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGACATTTCCGTTTTGCCATGTGGACACACTATTCATTTAGAATGTGTGAAGGAGATGGAGCAACGCTTACAATACACATGCCCTGTTTGCTCAAAATCCTATTG
CGATATGTCGAGCGTGTGGGAGAAACTAGATCATGAGGTCGCATCGACGCCGATGCCACAAATGTACCAACATAAAATGGTTTGGATTCTCTGTAATGACTGTAGTGAGA
TATCAGAGGTTAATTATCACATTGTGGCACACAAGTGCCTGAAATGCAAGTCCTATAATACAAGGCTGACCCAAGGAGGGCCCTCTTCATGTTCACCAAGGATTGCTCAA
ATAGTGAGATGA
Protein sequenceShow/hide protein sequence
MSDISVLPCGHTIHLECVKEMEQRLQYTCPVCSKSYCDMSSVWEKLDHEVASTPMPQMYQHKMVWILCNDCSEISEVNYHIVAHKCLKCKSYNTRLTQGGPSSCSPRIAQ
IVR