; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017043 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017043
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPectate lyase
Genome locationChr03:10535159..10535728
RNA-Seq ExpressionHG10017043
SyntenyHG10017043
Gene Ontology termsGO:0045490 - pectin catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030570 - pectate lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002022 - Pectate lyase
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold
IPR018082 - AmbAllergen
IPR045032 - Pectin lyase family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034543.1 putative pectate lyase 12 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-9589.8Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKLVQRMPRCR GYIHVVNNDFTQWEMYAIGGSG+PTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPN-GGGFALGSGMDYTDDMSE-------SYFVRVFSLLLCSFCALVLAFV
        QGLEVKYEKAYSVEPKS ALI+QLTWHAGPLGVGGRDNNLGMWTTGPN GGGF +GSG DYTDDMSE       SYFV V S+LLCSFCAL LAFV
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPN-GGGFALGSGMDYTDDMSE-------SYFVRVFSLLLCSFCALVLAFV

XP_004143279.1 probable pectate lyase 12 [Cucumis sativus]1.3e-9692.27Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRS+GDILVNGAFFVTSG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGP--NGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFC---ALVLAFVL
        QGLEVKYEKAYSVEPKSAALI+QLTWHAGPLGVGGRDNNLGMWTTGP  NGGGF LGSGMDYTDDMSES FVRVFS+LL SFC    +V+AFVL
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGP--NGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFC---ALVLAFVL

XP_022925720.1 probable pectate lyase 12 [Cucurbita moschata]2.5e-9589.8Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKLVQRMPRCR GYIHVVNNDFTQWEMYAIGGSG+PTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPN-GGGFALGSGMDYTDDMSES-------YFVRVFSLLLCSFCALVLAFV
        QGLEVKYEKAYSVEPKS ALI+QLTWHAGPLGVGGRDNNLGMWTTGPN GGGF +GSG DYTDDMSES       YFV V S+LLCSFCAL LAFV
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPN-GGGFALGSGMDYTDDMSES-------YFVRVFSLLLCSFCALVLAFV

XP_038880992.1 probable pectate lyase 12 [Benincasa hispida]3.1e-10195.77Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRS+GDILVNGAFFVTSG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFCALVLAFVL
        QGLEVKYEKAYSVEPKSAALI+QLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSESYFVR FSLLL  FCALV+AF+L
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFCALVLAFVL

XP_038881095.1 probable pectate lyase 12 [Benincasa hispida]1.1e-10196.3Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRS+GDILVNGAFFVTSG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFCALVLAFVL
        QGLEVKYEKAYSVEPKSAALI+QLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSESYFVR FSLLL  FCALV+AF+L
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFCALVLAFVL

TrEMBL top hitse value%identityAlignment
A0A0A0KIG0 Pectate lyase6.5e-9792.27Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRS+GDILVNGAFFVTSG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGP--NGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFC---ALVLAFVL
        QGLEVKYEKAYSVEPKSAALI+QLTWHAGPLGVGGRDNNLGMWTTGP  NGGGF LGSGMDYTDDMSES FVRVFS+LL SFC    +V+AFVL
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGP--NGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFC---ALVLAFVL

A0A1S3CH45 Pectate lyase1.6e-9591.75Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRS+GDILVNGAFFVTSG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGP--NGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFC---ALVLAFVL
        QGLEVKYEKAYSVEPKSAALI+QLTWHAGPLGVGGRDNNLGMWTTGP  NGGGF LGSGMDYTDDMSES FVR FS+LL SFC    +V+AFVL
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGP--NGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFC---ALVLAFVL

A0A5A7VE54 Pectate lyase4.6e-9591.24Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRS+GDILVNGAFFVTSG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGP--NGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFC---ALVLAFVL
        QGLEVKYEKAYSVEPKSAALI+QLTWHAGPLGVGGRDNNLGMWTTGP  NGGGF LGSGMDYTDDMS+S FVR FS+LL SFC    +V+AFVL
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGP--NGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFC---ALVLAFVL

A0A6J1EJ04 Pectate lyase1.2e-9589.8Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKLVQRMPRCR GYIHVVNNDFTQWEMYAIGGSG+PTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPN-GGGFALGSGMDYTDDMSES-------YFVRVFSLLLCSFCALVLAFV
        QGLEVKYEKAYSVEPKS ALI+QLTWHAGPLGVGGRDNNLGMWTTGPN GGGF +GSG DYTDDMSES       YFV V S+LLCSFCAL LAFV
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPN-GGGFALGSGMDYTDDMSES-------YFVRVFSLLLCSFCALVLAFV

A0A6J1IRN3 Pectate lyase2.1e-9589.8Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKLVQRMPRCR GYIHVVNNDFTQWEMYAIGGSG+PTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPN-GGGFALGSGMDYTDDMSES-------YFVRVFSLLLCSFCALVLAFV
        QGLEVKYEKAYSVEPKS ALI+QLTWHAGPLGVGGRDNNLGMWTTGPN GGGF +GSG DYTDDMSES       YFV V S+LLCSFCAL LAFV
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPN-GGGFALGSGMDYTDDMSES-------YFVRVFSLLLCSFCALVLAFV

SwissProt top hitse value%identityAlignment
Q93WF1 Probable pectate lyase 201.3e-4663.5Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIA+NHFGE L+QRMPRCR GY HVVNND+T WEMYAIGGS +PTINSQGNRY AP +R AKEVTKR    + +WR WNWRS+GD+ +NGAFF  SG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGV-GGR
         GL   Y +A S+  KS++L+  +T++AG L   GGR
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGV-GGR

Q93Z04 Probable pectate lyase 132.7e-5262.13Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVET-SESEWRGWNWRSDGDILVNGAFFVTS
        M+VTIAFNHFG+ LVQRMPRCR GYIHVVNNDFT+W+MYAIGGSGNPTINSQGNRY+AP D +AKEVTKRV++  + EW  WNWR++GD++ NGAFFV S
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVET-SESEWRGWNWRSDGDILVNGAFFVTS

Query:  GQGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRD------NNLGMWTTGPNGGGFALGS---GMD
        G+G+   Y KA SV+PK+A+L++QLT +AG  G G RD      N+   +     GGG + GS   GMD
Subjt:  GQGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRD------NNLGMWTTGPNGGGFALGS---GMD

Q944R1 Probable pectate lyase 151.8e-4867.42Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIA+NHFGE LVQRMPRCR GY HVVNND+T WEMYAIGGS  PTINSQGNRY AP DR AKEVTKRVET  SEW+ WNWRS+GD+L+NGAFF  SG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLG
         G    Y +A S+  K +++++ +T  AG LG
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLG

Q9SCP2 Probable pectate lyase 121.8e-7271.66Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKL+QRMPRCR GYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAP +  AKEVTKRVET + +W+GWNWRS+GDILVNGAFFV SG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSE-------SYFVRVFSLLLCSF
        +G E++YEKAYSVEPKSA+ I Q+T+H+G LGVGGR+NNLGMWTT  + G   L S  DYTD+MS        S+ V VF L   S+
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSE-------SYFVRVFSLLLCSF

Q9SVQ6 Putative pectate lyase 142.9e-4663.36Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIA+NHFGE L+QRMPRCR GY HVVNND+T WEMYAIGGS NPTINSQGNR+ AP +R AKEVTKRV   + EW  WNWRS GD+++NGA+F +SG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPL
         G    Y +A S+  KS++L+  LT  +G L
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPL

Arabidopsis top hitse value%identityAlignment
AT3G53190.1 Pectin lyase-like superfamily protein1.3e-7371.66Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGEKL+QRMPRCR GYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAP +  AKEVTKRVET + +W+GWNWRS+GDILVNGAFFV SG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSE-------SYFVRVFSLLLCSF
        +G E++YEKAYSVEPKSA+ I Q+T+H+G LGVGGR+NNLGMWTT  + G   L S  DYTD+MS        S+ V VF L   S+
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSE-------SYFVRVFSLLLCSF

AT3G54920.1 Pectin lyase-like superfamily protein1.9e-5362.13Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVET-SESEWRGWNWRSDGDILVNGAFFVTS
        M+VTIAFNHFG+ LVQRMPRCR GYIHVVNNDFT+W+MYAIGGSGNPTINSQGNRY+AP D +AKEVTKRV++  + EW  WNWR++GD++ NGAFFV S
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVET-SESEWRGWNWRSDGDILVNGAFFVTS

Query:  GQGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRD------NNLGMWTTGPNGGGFALGS---GMD
        G+G+   Y KA SV+PK+A+L++QLT +AG  G G RD      N+   +     GGG + GS   GMD
Subjt:  GQGLEVKYEKAYSVEPKSAALINQLTWHAGPLGVGGRD------NNLGMWTTGPNGGGFALGS---GMD

AT4G13710.1 Pectin lyase-like superfamily protein1.3e-4967.42Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIA+NHFGE LVQRMPRCR GY HVVNND+T WEMYAIGGS  PTINSQGNRY AP DR AKEVTKRVET  SEW+ WNWRS+GD+L+NGAFF  SG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLG
         G    Y +A S+  K +++++ +T  AG LG
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLG

AT4G13710.2 Pectin lyase-like superfamily protein1.3e-4967.42Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIA+NHFGE LVQRMPRCR GY HVVNND+T WEMYAIGGS  PTINSQGNRY AP DR AKEVTKRVET  SEW+ WNWRS+GD+L+NGAFF  SG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLG
         G    Y +A S+  K +++++ +T  AG LG
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLG

AT5G04310.1 Pectin lyase-like superfamily protein1.9e-5668.42Show/hide
Query:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG
        M+VTIAFNHFGE LVQRMPRCR GYIHVVNNDFT WEMYAIGGS +PTINSQGNRYTAP D NAKEVTKRV+++E  W GWNWR++GD++VNGAFFV SG
Subjt:  MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSG

Query:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLG-VGGRDNNLGMWTTGPNGGG
         G+   Y +A SV+PK+AA+I+QLT +AG  G   GR+   G +    NGGG
Subjt:  QGLEVKYEKAYSVEPKSAALINQLTWHAGPLG-VGGRDNNLGMWTTGPNGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTTACAATAGCATTCAACCACTTCGGGGAGAAGCTAGTGCAGAGGATGCCGCGATGCCGACTAGGTTACATTCACGTCGTCAACAACGACTTCACCCAATGGGA
AATGTACGCAATCGGCGGCAGTGGAAACCCCACCATCAACAGCCAAGGCAACCGCTACACCGCCCCCTACGACCGCAACGCCAAGGAGGTCACTAAGCGAGTCGAAACTT
CCGAATCCGAATGGCGCGGCTGGAACTGGCGCTCCGACGGCGATATCCTCGTCAACGGCGCCTTCTTCGTCACTTCCGGCCAAGGCCTTGAAGTCAAGTACGAGAAGGCT
TACAGCGTCGAGCCCAAGTCCGCCGCCCTAATTAATCAGCTCACTTGGCACGCCGGCCCGCTCGGCGTCGGCGGCAGGGACAATAATTTGGGAATGTGGACTACTGGCCC
TAATGGTGGAGGGTTTGCGCTTGGGTCTGGCATGGACTACACTGACGACATGTCGGAAAGTTATTTTGTTAGGGTTTTTTCTCTTTTGTTGTGCTCTTTTTGTGCATTGG
TGCTTGCCTTTGTGCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTTACAATAGCATTCAACCACTTCGGGGAGAAGCTAGTGCAGAGGATGCCGCGATGCCGACTAGGTTACATTCACGTCGTCAACAACGACTTCACCCAATGGGA
AATGTACGCAATCGGCGGCAGTGGAAACCCCACCATCAACAGCCAAGGCAACCGCTACACCGCCCCCTACGACCGCAACGCCAAGGAGGTCACTAAGCGAGTCGAAACTT
CCGAATCCGAATGGCGCGGCTGGAACTGGCGCTCCGACGGCGATATCCTCGTCAACGGCGCCTTCTTCGTCACTTCCGGCCAAGGCCTTGAAGTCAAGTACGAGAAGGCT
TACAGCGTCGAGCCCAAGTCCGCCGCCCTAATTAATCAGCTCACTTGGCACGCCGGCCCGCTCGGCGTCGGCGGCAGGGACAATAATTTGGGAATGTGGACTACTGGCCC
TAATGGTGGAGGGTTTGCGCTTGGGTCTGGCATGGACTACACTGACGACATGTCGGAAAGTTATTTTGTTAGGGTTTTTTCTCTTTTGTTGTGCTCTTTTTGTGCATTGG
TGCTTGCCTTTGTGCTATGA
Protein sequenceShow/hide protein sequence
MKVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETSESEWRGWNWRSDGDILVNGAFFVTSGQGLEVKYEKA
YSVEPKSAALINQLTWHAGPLGVGGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSESYFVRVFSLLLCSFCALVLAFVL