CuGenDBv2

Gene ID	HG10017058
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	thylakoid lumenal 15.0 kDa protein 2, chloroplastic
Genome location	Chr03:10656856..10658294
RNA-Seq Expression	HG10017058
Synteny	HG10017058
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6604403.1 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

3.1e-108

87.93

Show/hide

Query:  MAFMH----LPSPSLSFSRPSPPVFRS----SSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTS
        MAFMH    LPSPSLSFS  SPPV+RS    SSRFSPPS SFPS K TDF+N LLH P KSLSFALS  LALG+ LSGVGFADAKVGVNKPELLPKEFTS
Subjt:  MAFMH----LPSPSLSFSRPSPPVFRS----SSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQE RLKQEIADIEK+TGYKLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

XP_004143269.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis sativus]

1.6e-112

92.11

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Query:  MAFM----HLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV
        MAFM    HLPSPSLSFSRPSPP+ RSSSRFSPPS   PSQK+TDFS+ LLH P KSLSF LSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV
Subjt:  MAFM----HLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV

Query:  AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE
        AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE
Subjt:  AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE

Query:  DASIESAVMAISNCLREPVGPNNCSEIK
        D+SIESAVMAIS+CLREPVG NNCSEIK
Subjt:  DASIESAVMAISNCLREPVGPNNCSEIK

XP_008462470.1 PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis melo]

5.6e-110

89.91

Show/hide

Query:  MAFM----HLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV
        MAFM    HLPSPSLSFSR S P+ RSSSRFSPPS  FPS+K+TDF + LLH P K LSF LSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV
Subjt:  MAFM----HLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV

Query:  AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE
        AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYP TPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE
Subjt:  AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE

Query:  DASIESAVMAISNCLREPVGPNNCSEIK
        D+SIESAVMAIS+CLREPVGPNNCSEIK
Subjt:  DASIESAVMAISNCLREPVGPNNCSEIK

XP_022925930.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita moschata]

2.4e-108

87.93

Show/hide

Query:  MAFMH----LPSPSLSFSRPSPPVFRSS----SRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTS
        MAFMH    LPSPSLSF   SPPV+RSS    SRFSPPS SFPS KFTDF+N LLH P KSLSFALS  LALG+ LSGVGFADAKVGVNKPELLPKEFTS
Subjt:  MAFMH----LPSPSLSFSRPSPPVFRSS----SRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQE RLKQEIADIEK+TGYKLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

XP_038881208.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Benincasa hispida]

1.1e-116

94.3

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Query:  MAFM----HLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV
        MAFM    HLPSPSLSF RPSPPVFRSS RFSPPSFSFPSQK TDFSNWLLHFP KSLSFA SGALALGI LSGVGFADAKVGVNKPELLPKEFTSVIDV
Subjt:  MAFM----HLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV

Query:  AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE
        AGFLSDGQEIRLKQEIA+IEKDTGYKLRVLAQNYP+TPGLAIKDFW+VDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE
Subjt:  AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE

Query:  DASIESAVMAISNCLREPVGPNNCSEIK
        DASIESAVMAISNCLREPVGPNNCSEIK
Subjt:  DASIESAVMAISNCLREPVGPNNCSEIK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KH91 Uncharacterized protein

7.6e-113

92.11

Show/hide

Query:  MAFM----HLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV
        MAFM    HLPSPSLSFSRPSPP+ RSSSRFSPPS   PSQK+TDFS+ LLH P KSLSF LSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV
Subjt:  MAFM----HLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV

Query:  AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE
        AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE
Subjt:  AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE

Query:  DASIESAVMAISNCLREPVGPNNCSEIK
        D+SIESAVMAIS+CLREPVG NNCSEIK
Subjt:  DASIESAVMAISNCLREPVGPNNCSEIK

A0A1S3CH24 thylakoid lumenal 15.0 kDa protein 2, chloroplastic

2.7e-110

89.91

Show/hide

Query:  MAFM----HLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV
        MAFM    HLPSPSLSFSR S P+ RSSSRFSPPS  FPS+K+TDF + LLH P K LSF LSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV
Subjt:  MAFM----HLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDV

Query:  AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE
        AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYP TPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE
Subjt:  AGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGE

Query:  DASIESAVMAISNCLREPVGPNNCSEIK
        D+SIESAVMAIS+CLREPVGPNNCSEIK
Subjt:  DASIESAVMAISNCLREPVGPNNCSEIK

A0A6J1EJL7 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like

1.1e-108

87.93

Show/hide

Query:  MAFMH----LPSPSLSFSRPSPPVFRSS----SRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTS
        MAFMH    LPSPSLSF   SPPV+RSS    SRFSPPS SFPS KFTDF+N LLH P KSLSFALS  LALG+ LSGVGFADAKVGVNKPELLPKEFTS
Subjt:  MAFMH----LPSPSLSFSRPSPPVFRSS----SRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQE RLKQEIADIEK+TGYKLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

A0A6J1HFT2 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like

5.3e-106

88.21

Show/hide

Query:  MAFMH-----LPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVID
        MAFMH     LPSPSL FS+ SP V RS S  S P  SFPS+K TD SNWLL FP KSLSFALSGALALGIT+SGVGFADA VGVNKPELLPKEFTSVID
Subjt:  MAFMH-----LPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVID

Query:  VAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKG
        VAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVG +VDLDIPRSFWSRLAGKYGNIFYWKEKG
Subjt:  VAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKG

Query:  EDASIESAVMAISNCLREPVGPNNCSEIK
        EDASIESAV+AISNCL+EPVGPNNCSEIK
Subjt:  EDASIESAVMAISNCLREPVGPNNCSEIK

A0A6J1IMV5 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like

5.7e-108

87.5

Show/hide

Query:  MAFMH----LPSPSLSFSRPSPPVFRS----SSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTS
        MAFMH    LPSPSLSF   SPPV+RS    SSRFSPPS SFPS K TDF+N LLH P KSLSFALS  LALG+ LSGVGFADAKVGVNKPELLPKEFTS
Subjt:  MAFMH----LPSPSLSFSRPSPPVFRS----SSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTS

Query:  VIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQE RLKQEIADIEKDTGYKLRVLAQN+PVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

SwissProt top hits

e value

%identity

Alignment

Q9LVV5 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic

1.9e-89

76.34

Show/hide

Query:  MAFMHLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFL
        MA +  P PS   S  SP VF  SSR    S     +   D  NW+  F  KSLS   SGALALG++LSGVGFADAKVGVNKPELLPKEFTSVIDVA FL
Subjt:  MAFMHLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFL

Query:  SDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASI
        S+GQE R+ QEIA++EKDTG+KLRVLAQNYPVTPGLAIKDFWQVDD TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGEDASI
Subjt:  SDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASI

Query:  ESAVMAISNCLREPVGPNNCSEIK
        E+AVMAIS+CLREPVG NNC+EI+
Subjt:  ESAVMAISNCLREPVGPNNCSEIK

Arabidopsis top hits

e value

%identity

Alignment

AT5G52970.1 thylakoid lumen 15.0 kDa protein

1.4e-90

76.34

Show/hide

Query:  MAFMHLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFL
        MA +  P PS   S  SP VF  SSR    S     +   D  NW+  F  KSLS   SGALALG++LSGVGFADAKVGVNKPELLPKEFTSVIDVA FL
Subjt:  MAFMHLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFL

Query:  SDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASI
        S+GQE R+ QEIA++EKDTG+KLRVLAQNYPVTPGLAIKDFWQVDD TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGEDASI
Subjt:  SDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASI

Query:  ESAVMAISNCLREPVGPNNCSEIK
        E+AVMAIS+CLREPVG NNC+EI+
Subjt:  ESAVMAISNCLREPVGPNNCSEIK

Sequences

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CDS sequence

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ATGGCGTTTATGCATCTTCCATCTCCATCTCTTTCATTTTCCAGACCTTCACCGCCGGTTTTCAGATCATCATCTCGCTTCTCTCCGCCATCATTTTCATTTCCCTCCCA
AAAATTTACTGATTTCAGCAACTGGCTTCTTCATTTCCCCCATAAATCACTGAGTTTCGCGCTCTCTGGAGCTCTAGCGCTCGGCATAACTCTATCCGGAGTTGGATTTG
CTGACGCCAAAGTTGGGGTTAACAAACCGGAATTGCTTCCCAAGGAGTTCACCTCTGTCATTGATGTCGCTGGGTTTCTATCTGATGGCCAGGAAATTAGACTCAAACAA
GAAATTGCTGACATTGAGAAGGATACCGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGTGACACCAGGGCTGGCAATCAAAGATTTTTGGCAAGTGGATGATAG
AACAATTGTGTTTGTTGCCGATCCTACATTTGGTAACATATTGAACTTCAACGTCGGAGCGACGGTTGATTTAGACATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAA
AGTATGGAAACATATTTTATTGGAAAGAGAAGGGTGAAGATGCATCTATTGAATCAGCTGTCATGGCAATATCTAATTGCTTGAGAGAACCCGTCGGCCCAAATAACTGT
TCCGAGATAAAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAFMHLPSPSLSFSRPSPPVFRSSSRFSPPSFSFPSQKFTDFSNWLLHFPHKSLSFALSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQ
EIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMAISNCLREPVGPNNC
SEIK

HG10017058 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome