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HG10017098 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017098
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein indeterminate-domain 9
Genome locationChr03:10993211..10993618
RNA-Seq ExpressionHG10017098
SyntenyHG10017098
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047272.1 protein indeterminate-domain 9 [Cucumis melo var. makuwa]2.2e-3775.52Show/hide
Query:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVMSSSSN--DISFE-SGNYYGGKGNGLRD
        MNLTLSS  +KQQQQQ+      N PSF S    GGGGGMSATALLLKAAQLGSTKS++NSF SGSNSVGVVMSSSS+  +IS E +GNY+GGKGNGLRD
Subjt:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVMSSSSN--DISFE-SGNYYGGKGNGLRD

Query:  FFGRKE-GE-RNDEMIIPLMEMTKFANSMSSDMGLSQFIGNNN
        FFGRKE GE  NDE+IIP MEMTKFANSMSS+MG SQFIGNN+
Subjt:  FFGRKE-GE-RNDEMIIPLMEMTKFANSMSSDMGLSQFIGNNN

XP_004143353.2 zinc finger protein BALDIBIS [Cucumis sativus]7.7e-3875.52Show/hide
Query:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVM--SSSSNDISFESGNYYGGKGNGLRDF
        MNLTLSS  +KQQQQQ+      N PSFCSA  GGGGGGMSATALLLKAAQLGSTKSN+NSF S SNSVGVVM  SSSSN+IS E+GNY+GGKGNGL+DF
Subjt:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVM--SSSSNDISFESGNYYGGKGNGLRDF

Query:  FGRKEGERNDEMIIPLM--EMTKFANSMSSDMG-LSQFIGNNN
        FGRKE    DE+IIPLM  EMTKFA+SMSS+MG +SQFIGNN+
Subjt:  FGRKEGERNDEMIIPLM--EMTKFANSMSSDMG-LSQFIGNNN

XP_008449264.1 PREDICTED: protein indeterminate-domain 9 [Cucumis melo]2.2e-3775.52Show/hide
Query:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVMSSSSN--DISFE-SGNYYGGKGNGLRD
        MNLTLSS  +KQQQQQ+      N PSF S    GGGGGMSATALLLKAAQLGSTKS++NSF SGSNSVGVVMSSSS+  +IS E +GNY+GGKGNGLRD
Subjt:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVMSSSSN--DISFE-SGNYYGGKGNGLRD

Query:  FFGRKE-GE-RNDEMIIPLMEMTKFANSMSSDMGLSQFIGNNN
        FFGRKE GE  NDE+IIP MEMTKFANSMSS+MG SQFIGNN+
Subjt:  FFGRKE-GE-RNDEMIIPLMEMTKFANSMSSDMGLSQFIGNNN

XP_022972578.1 protein indeterminate-domain 9-like [Cucurbita maxima]2.8e-1659.35Show/hide
Query:  NLPSFCSAMGGGGGGG-----MSATALLLKAAQLGSTKSNNNSFSGSNSVGVVMSSSSNDISFESGNYY-----GGKGNGLRDFFGRKEGERNDEM-IIP
        NL SFCS  GG GGGG     MSATALLLKAA  GS KS   SFSG NSVG VMSSSS+      G        GG GNGLRDF G +E E N  + ++ 
Subjt:  NLPSFCSAMGGGGGGG-----MSATALLLKAAQLGSTKSNNNSFSGSNSVGVVMSSSSNDISFESGNYY-----GGKGNGLRDFFGRKEGERNDEM-IIP

Query:  LMEMTKFANSMSSDMGLSQFIGN
        LMEM+KF +SMSS+MGLS+FIGN
Subjt:  LMEMTKFANSMSSDMGLSQFIGN

XP_038883199.1 zinc finger protein BALDIBIS-like [Benincasa hispida]2.4e-4784.33Show/hide
Query:  MNLTLSSSANKQQQQQ-EGYN-LPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSFSGSNSVGVVMSSSSNDISFESGNYYGGKGNGLRDFFGRKE
        MNLTLSSSANKQQQQ    YN LPSFCSA GGGGGGGMSATALL+KAAQLGSTKSN++  SGSNSVGVVMSSSSN++SFESGNYYGG+GNGLRDFFGRK+
Subjt:  MNLTLSSSANKQQQQQ-EGYN-LPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSFSGSNSVGVVMSSSSNDISFESGNYYGGKGNGLRDFFGRKE

Query:  GERND-EMIIPLMEMTKFANSMSSDMGLSQFIGN
        GE ND ++IIPLMEMTKFANSMSS+MGLS FIGN
Subjt:  GERND-EMIIPLMEMTKFANSMSSDMGLSQFIGN

TrEMBL top hitse value%identityAlignment
A0A0A0KIB8 C2H2-type domain-containing protein3.7e-3875.52Show/hide
Query:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVM--SSSSNDISFESGNYYGGKGNGLRDF
        MNLTLSS  +KQQQQQ+      N PSFCSA  GGGGGGMSATALLLKAAQLGSTKSN+NSF S SNSVGVVM  SSSSN+IS E+GNY+GGKGNGL+DF
Subjt:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVM--SSSSNDISFESGNYYGGKGNGLRDF

Query:  FGRKEGERNDEMIIPLM--EMTKFANSMSSDMG-LSQFIGNNN
        FGRKE    DE+IIPLM  EMTKFA+SMSS+MG +SQFIGNN+
Subjt:  FGRKEGERNDEMIIPLM--EMTKFANSMSSDMG-LSQFIGNNN

A0A1S3BM97 protein indeterminate-domain 91.1e-3775.52Show/hide
Query:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVMSSSSN--DISFE-SGNYYGGKGNGLRD
        MNLTLSS  +KQQQQQ+      N PSF S    GGGGGMSATALLLKAAQLGSTKS++NSF SGSNSVGVVMSSSS+  +IS E +GNY+GGKGNGLRD
Subjt:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVMSSSSN--DISFE-SGNYYGGKGNGLRD

Query:  FFGRKE-GE-RNDEMIIPLMEMTKFANSMSSDMGLSQFIGNNN
        FFGRKE GE  NDE+IIP MEMTKFANSMSS+MG SQFIGNN+
Subjt:  FFGRKE-GE-RNDEMIIPLMEMTKFANSMSSDMGLSQFIGNNN

A0A5A7TUZ2 Protein indeterminate-domain 91.1e-3775.52Show/hide
Query:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVMSSSSN--DISFE-SGNYYGGKGNGLRD
        MNLTLSS  +KQQQQQ+      N PSF S    GGGGGMSATALLLKAAQLGSTKS++NSF SGSNSVGVVMSSSS+  +IS E +GNY+GGKGNGLRD
Subjt:  MNLTLSSSANKQQQQQEGY----NLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSF-SGSNSVGVVMSSSSN--DISFE-SGNYYGGKGNGLRD

Query:  FFGRKE-GE-RNDEMIIPLMEMTKFANSMSSDMGLSQFIGNNN
        FFGRKE GE  NDE+IIP MEMTKFANSMSS+MG SQFIGNN+
Subjt:  FFGRKE-GE-RNDEMIIPLMEMTKFANSMSSDMGLSQFIGNNN

A0A6J1HDF4 protein indeterminate-domain 9-like5.2e-1657.85Show/hide
Query:  NLPSFCSAMGGGGGG---GMSATALLLKAAQLGSTKSNNNSFSGSNSVGVVMSSSSNDISFESGNY-----YGGKGNGLRDFFGRKEGERNDEM-IIPLM
        NL SFCS+   GGG     MSATALLLKAA  GSTKS N S+SG NSVG VMSSSS+      G       +GG G+GLRDF G +E E +  M ++ LM
Subjt:  NLPSFCSAMGGGGGG---GMSATALLLKAAQLGSTKSNNNSFSGSNSVGVVMSSSSNDISFESGNY-----YGGKGNGLRDFFGRKEGERNDEM-IIPLM

Query:  EMTKFANSMSSDMGLSQFIGN
        EM+KF +SMSS+MGLS+FIGN
Subjt:  EMTKFANSMSSDMGLSQFIGN

A0A6J1IAE3 protein indeterminate-domain 9-like1.4e-1659.35Show/hide
Query:  NLPSFCSAMGGGGGGG-----MSATALLLKAAQLGSTKSNNNSFSGSNSVGVVMSSSSNDISFESGNYY-----GGKGNGLRDFFGRKEGERNDEM-IIP
        NL SFCS  GG GGGG     MSATALLLKAA  GS KS   SFSG NSVG VMSSSS+      G        GG GNGLRDF G +E E N  + ++ 
Subjt:  NLPSFCSAMGGGGGGG-----MSATALLLKAAQLGSTKSNNNSFSGSNSVGVVMSSSSNDISFESGNYY-----GGKGNGLRDFFGRKEGERNDEM-IIP

Query:  LMEMTKFANSMSSDMGLSQFIGN
        LMEM+KF +SMSS+MGLS+FIGN
Subjt:  LMEMTKFANSMSSDMGLSQFIGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTCACTCTGTCCTCCTCTGCCAACAAACAACAACAACAACAAGAAGGTTATAACTTGCCATCATTTTGCTCGGCCATGGGCGGTGGCGGTGGCGGAGGGATGTC
GGCGACGGCGTTGCTGCTGAAAGCGGCGCAATTGGGATCGACAAAGAGTAATAATAACTCATTTTCAGGGAGTAATAGCGTGGGAGTAGTTATGAGTTCATCTTCAAATG
ATATTTCATTTGAGAGTGGTAATTATTATGGAGGAAAAGGAAATGGGTTGAGGGATTTTTTTGGGAGGAAGGAGGGAGAAAGGAATGATGAGATGATTATTCCATTAATG
GAGATGACCAAATTTGCTAATTCTATGAGCTCTGACATGGGTTTGAGCCAATTCATTGGCAATAATAATTCGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCTCACTCTGTCCTCCTCTGCCAACAAACAACAACAACAACAAGAAGGTTATAACTTGCCATCATTTTGCTCGGCCATGGGCGGTGGCGGTGGCGGAGGGATGTC
GGCGACGGCGTTGCTGCTGAAAGCGGCGCAATTGGGATCGACAAAGAGTAATAATAACTCATTTTCAGGGAGTAATAGCGTGGGAGTAGTTATGAGTTCATCTTCAAATG
ATATTTCATTTGAGAGTGGTAATTATTATGGAGGAAAAGGAAATGGGTTGAGGGATTTTTTTGGGAGGAAGGAGGGAGAAAGGAATGATGAGATGATTATTCCATTAATG
GAGATGACCAAATTTGCTAATTCTATGAGCTCTGACATGGGTTTGAGCCAATTCATTGGCAATAATAATTCGGTATAA
Protein sequenceShow/hide protein sequence
MNLTLSSSANKQQQQQEGYNLPSFCSAMGGGGGGGMSATALLLKAAQLGSTKSNNNSFSGSNSVGVVMSSSSNDISFESGNYYGGKGNGLRDFFGRKEGERNDEMIIPLM
EMTKFANSMSSDMGLSQFIGNNNSV