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HG10017100 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017100
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDNA-binding protein S1FA-like
Genome locationChr03:11017955..11019605
RNA-Seq ExpressionHG10017100
SyntenyHG10017100
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006779 - DNA binding protein S1FA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143239.1 DNA-binding protein S1FA [Cucumis sativus]2.4e-3591.01Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGN I D +ARG NPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKK VSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

XP_008449267.1 PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]2.0e-3489.89Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRM N I D +ARG NPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKK VSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

XP_022926041.1 DNA-binding protein S1FA-like [Cucurbita moschata]2.4e-3592.13Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        ME+DF+FGDKVPPAVNRMGN IGDAD RG NPGLIVLLVVGGLLLAFLV NYALYMYAQKTLPPKKKK VSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

XP_022962636.1 DNA-binding protein S1FA-like [Cucurbita moschata]4.0e-3591.01Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGN I +ADARG NPGLIVLLVVGGLLLAFL GNYALY+YAQKTLPPK+KK VSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

XP_038881351.1 DNA-binding protein S1FA-like [Benincasa hispida]2.1e-3694.38Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGN I DADARG NPGLIVLLVVGGLLLAFL GNYALYMYAQKTLPPKKKK VSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

TrEMBL top hitse value%identityAlignment
A0A0A0KEM3 DNA-binding protein S1FA1.1e-3591.01Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGN I D +ARG NPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKK VSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

A0A1S3BLN5 DNA-binding protein S1FA-like9.6e-3589.89Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRM N I D +ARG NPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKK VSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

A0A5A7TZ88 DNA-binding protein S1FA-like9.6e-3589.89Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRM N I D +ARG NPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKK VSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

A0A6J1EDS2 DNA-binding protein S1FA-like1.1e-3592.13Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        ME+DF+FGDKVPPAVNRMGN IGDAD RG NPGLIVLLVVGGLLLAFLV NYALYMYAQKTLPPKKKK VSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

A0A6J1HDT2 DNA-binding protein S1FA-like1.9e-3591.01Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGN I +ADARG NPGLIVLLVVGGLLLAFL GNYALY+YAQKTLPPK+KK VSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

SwissProt top hitse value%identityAlignment
P42551 DNA-binding protein S1FA16.5e-2075.38Show/hide
Query:  ADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        A+A+GLNPGLIVLLVVGG LL FL+ NY LY+YAQK LPP+KKK VSKKK+KRE+LKQG+  PGE
Subjt:  ADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

P42552 DNA-binding protein S1FA1.2e-2175Show/hide
Query:  IGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        + + +A+GLNPGLIVLLV+GGLLL FLVGN+ LY YAQK LPPKKKK +SKKKMKRERLKQG++ PGE
Subjt:  IGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

P42553 DNA-binding protein S1FA13.8e-2070.27Show/hide
Query:  NRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        ++  N I +   +GLNPG IVLLVV  LL+ F VGNYALYMYAQKTLPP+KKK VSKKK+KRE+LKQG+SAPGE
Subjt:  NRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

Q7XLX6 DNA-binding protein S1FA28.4e-2071.43Show/hide
Query:  NTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        N + +   +GLNPG+IVL+VV   LL F VGNYALY+YAQKTLPP+KKK VSKKKMKRE+LKQG+SAPGE
Subjt:  NTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

Q93VI0 DNA-binding protein S1FA34.9e-2071.64Show/hide
Query:  GDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        G  +++GLNPGLIVLLV+GGLLL FLVGN+ LY YAQK LPP+KKK VSKKKMK+E++KQG+  PGE
Subjt:  GDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

Arabidopsis top hitse value%identityAlignment
AT2G37120.1 S1FA-like DNA-binding protein1.0e-2071.88Show/hide
Query:  DARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        +A+GLNPGLIVLLV+GGLL+ FL+ NY +YMYAQK LPP+KKK +SKKK+KRE+LKQG+  PGE
Subjt:  DARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

AT3G09735.1 S1FA-like DNA-binding protein3.5e-2171.64Show/hide
Query:  GDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        G  +++GLNPGLIVLLV+GGLLL FLVGN+ LY YAQK LPP+KKK VSKKKMK+E++KQG+  PGE
Subjt:  GDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

AT3G53370.1 S1FA-like DNA-binding protein4.6e-2175.38Show/hide
Query:  ADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        A+A+GLNPGLIVLLVVGG LL FL+ NY LY+YAQK LPP+KKK VSKKK+KRE+LKQG+  PGE
Subjt:  ADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE

AT3G53370.2 S1FA-like DNA-binding protein3.2e-0669.7Show/hide
Query:  YAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE
        +A K LPP+KKK VSKKK+KRE+LKQG+  PGE
Subjt:  YAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGATTTCGACTTCGGCGACAAAGTCCCGCCGGCCGTTAACCGCATGGGGAACACGATTGGAGATGCGGATGCAAGAGGATTAAATCCAGGACTGATTGTGCT
GCTTGTAGTCGGCGGGCTGCTCTTGGCTTTTCTTGTTGGGAATTATGCTCTCTACATGTATGCGCAGAAGACTCTCCCACCAAAAAAGAAGAAATCAGTTTCCAAGAAGA
AGATGAAGAGGGAGAGATTGAAGCAAGGTATCTCTGCACCTGGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACGATTTCGACTTCGGCGACAAAGTCCCGCCGGCCGTTAACCGCATGGGGAACACGATTGGAGATGCGGATGCAAGAGGATTAAATCCAGGACTGATTGTGCT
GCTTGTAGTCGGCGGGCTGCTCTTGGCTTTTCTTGTTGGGAATTATGCTCTCTACATGTATGCGCAGAAGACTCTCCCACCAAAAAAGAAGAAATCAGTTTCCAAGAAGA
AGATGAAGAGGGAGAGATTGAAGCAAGGTATCTCTGCACCTGGAGAGTAG
Protein sequenceShow/hide protein sequence
MEDDFDFGDKVPPAVNRMGNTIGDADARGLNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKSVSKKKMKRERLKQGISAPGE