; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017122 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017122
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:11190622..11190879
RNA-Seq ExpressionHG10017122
SyntenyHG10017122
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047320.1 uncharacterized protein E6C27_scaffold908G001380 [Cucumis melo var. makuwa]3.7e-2274.07Show/hide
Query:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGMKLVPTSSPRLDDVLVSCAI
        MSNL LLRKALGSNFISR AT+NH LPLFFRQSP FFSTE EQPPPES  + F + S T GM L PTSS  LDDVL SC I
Subjt:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGMKLVPTSSPRLDDVLVSCAI

KAG6595284.1 hypothetical protein SDJN03_11837, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1575.81Show/hide
Query:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM
        MS L LLRKAL S+F++ SA ANH LP+FFRQSP FFSTEGEQPP ESPADPFL+TSKT G+
Subjt:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM

XP_004142097.1 uncharacterized protein LOC101220680 isoform X1 [Cucumis sativus]1.5e-1567.9Show/hide
Query:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM---KLVPTSSPRL-DDVLV
        MSNLSLLRKALGSNFISRSATANH LPLFFRQSP FFSTE EQ PPES  + F + + T G+   KLV  S   L  DVL+
Subjt:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM---KLVPTSSPRL-DDVLV

XP_022963065.1 uncharacterized protein LOC111463377 [Cucurbita moschata]1.2e-1575.81Show/hide
Query:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM
        MS L LLRKAL S+F++ SA ANH LP+FFRQSP FFSTEGEQPP ESPADPFL+TSKT G+
Subjt:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM

XP_031740000.1 uncharacterized protein LOC101220680 isoform X2 [Cucumis sativus]1.5e-1567.9Show/hide
Query:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM---KLVPTSSPRL-DDVLV
        MSNLSLLRKALGSNFISRSATANH LPLFFRQSP FFSTE EQ PPES  + F + + T G+   KLV  S   L  DVL+
Subjt:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM---KLVPTSSPRL-DDVLV

TrEMBL top hitse value%identityAlignment
A0A0A0L225 Uncharacterized protein7.3e-1667.9Show/hide
Query:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM---KLVPTSSPRL-DDVLV
        MSNLSLLRKALGSNFISRSATANH LPLFFRQSP FFSTE EQ PPES  + F + + T G+   KLV  S   L  DVL+
Subjt:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM---KLVPTSSPRL-DDVLV

A0A5A7TVY8 Uncharacterized protein1.8e-2274.07Show/hide
Query:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGMKLVPTSSPRLDDVLVSCAI
        MSNL LLRKALGSNFISR AT+NH LPLFFRQSP FFSTE EQPPPES  + F + S T GM L PTSS  LDDVL SC I
Subjt:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGMKLVPTSSPRLDDVLVSCAI

A0A6J1GDZ1 uncharacterized protein LOC1114531268.1e-1572.58Show/hide
Query:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM
        M+NL+LLRKALGS+F SRSAT NH LP+FFRQS  FFSTEGEQ PPES A+ FL+TS+T G+
Subjt:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM

A0A6J1HGY5 uncharacterized protein LOC1114633775.6e-1675.81Show/hide
Query:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM
        MS L LLRKAL S+F++ SA ANH LP+FFRQSP FFSTEGEQPP ESPADPFL+TSKT G+
Subjt:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM

A0A6J1I6U3 uncharacterized protein LOC1114712642.1e-1574.19Show/hide
Query:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM
        MS L LLRKALGS+F++ SA ANH LP+FFRQSP FFSTEGEQPP E PAD FL+TSKT G+
Subjt:  MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATCTCAGTCTGCTCCGTAAGGCACTTGGATCCAACTTCATTTCTCGATCGGCGACGGCAAATCATCGCCTCCCTCTGTTTTTCCGCCAATCTCCTAGTTTCTT
CTCCACGGAAGGGGAACAACCCCCACCTGAATCGCCCGCCGATCCTTTTCTCAATACATCAAAAACAACAGGTATGAAGCTCGTTCCTACGTCGTCGCCGCGTCTGGACG
ATGTCCTTGTGTCGTGTGCGATATTGGGACAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATCTCAGTCTGCTCCGTAAGGCACTTGGATCCAACTTCATTTCTCGATCGGCGACGGCAAATCATCGCCTCCCTCTGTTTTTCCGCCAATCTCCTAGTTTCTT
CTCCACGGAAGGGGAACAACCCCCACCTGAATCGCCCGCCGATCCTTTTCTCAATACATCAAAAACAACAGGTATGAAGCTCGTTCCTACGTCGTCGCCGCGTCTGGACG
ATGTCCTTGTGTCGTGTGCGATATTGGGACAGGTTTAG
Protein sequenceShow/hide protein sequence
MSNLSLLRKALGSNFISRSATANHRLPLFFRQSPSFFSTEGEQPPPESPADPFLNTSKTTGMKLVPTSSPRLDDVLVSCAILGQV