CuGenDBv2

Gene ID	HG10017182
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP synthase subunit a, chloroplastic
Genome location	Chr03:11749823..11750143
RNA-Seq Expression	HG10017182
Synteny	HG10017182
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR045082 - ATP synthase, F0 complex, subunit A, bacterial/chloroplast

Homology

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GenBank top hits

e value

%identity

Alignment

AHM88818.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

6.0e-46

98.94

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

AHM91116.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

6.0e-46

98.94

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

AHM91176.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

6.0e-46

98.94

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

YP_009751726.1 CF0 subunit IV [Herpetospermum pedunculosum]

6.0e-46

98.94

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

YP_009752654.1 CF0 subunit IV [Ampelosycios humblotii]

6.0e-46

98.94

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

TrEMBL top hits

e value

%identity

Alignment

A0A1S4ETZ3 ATP synthase subunit a, chloroplastic

2.9e-46

98.94

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

A0A1X9Q128 ATP synthase subunit a, chloroplastic

2.9e-46

98.94

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

A0A218KG29 ATP synthase subunit a, chloroplastic

2.9e-46

98.94

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

A0A249RZA4 ATP synthase subunit a, chloroplastic

2.9e-46

98.94

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

G3ETX3 ATP synthase subunit a, chloroplastic

2.9e-46

98.94

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

SwissProt top hits

e value

%identity

Alignment

Q09G58 ATP synthase subunit a, chloroplastic

1.4e-45

91.49

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MN+L CSINT KGLYDISGVEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA +AVRNPQTIPTDGQNFF+YVLEFIRD+SKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

Q09X29 ATP synthase subunit a, chloroplastic

9.6e-47

93.62

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MN+LLCSINT KGLYDISGVEVGQHLYW+IGGFQVHAQVLITSWVVIAILLGS+IIAVRNPQTIPTDGQNFF+YVLEFIRDVS+TQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

Q0G9N1 ATP synthase subunit a, chloroplastic

1.1e-45

92.55

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MN+L CSINT KGLYDISGVEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA IAVRNPQTIPTDGQNFF+YVLEFIRD+SKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

Q4FGF5 ATP synthase subunit a, chloroplastic

1.4e-45

91.49

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MN+L CS+NT KGLYDISGVEVGQH YWQIGGFQVHAQVLITSW VIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRD+SKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

Q4VZP5 ATP synthase subunit a, chloroplastic

7.9e-49

98.94

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFF+YVLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

Arabidopsis top hits

e value

%identity

Alignment

ATCG00150.1 ATPase, F0 complex, subunit A protein

7.1e-45

86.46

Show/hide

Query:  MNILLCSINT--QKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW
        MN+L CSINT  ++GLY+ISGVEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA++A+RNPQTIPTDGQNFF++VLEFIRDVSKTQIGEEYGPW
Subjt:  MNILLCSINT--QKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPW

Sequences

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CDS sequence

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ATGAATATTCTATTATGTTCTATCAACACACAAAAGGGGTTATACGATATATCTGGTGTGGAAGTCGGCCAACATTTGTATTGGCAAATAGGAGGTTTCCAAGTACATGC
CCAAGTACTTATTACTTCTTGGGTTGTAATTGCTATCTTATTAGGTTCAGCCATTATAGCTGTTCGTAATCCACAAACCATTCCTACTGACGGTCAGAATTTCTTCAAAT
ATGTCCTTGAATTCATTCGAGACGTGAGCAAAACTCAGATTGGCGAAGAATATGGTCCATGGGCACTTAGAATATTGCTTACCCTTGAGGTGGAAGAATGA

mRNA sequence

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Protein sequence

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MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFKYVLEFIRDVSKTQIGEEYGPWALRILLTLEVEE

HG10017182 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome