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HG10017211 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017211
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich protein 5-like
Genome locationChr03:11951949..11952329
RNA-Seq ExpressionHG10017211
SyntenyHG10017211
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595344.1 hypothetical protein SDJN03_11897, partial [Cucurbita argyrosperma subsp. sororia]4.5e-0855.74Show/hide
Query:  FIILPIVSVSIFIFITLCVLNINCRSRVYNGKIDSGR-HIYDGGQIDVAIDNGNDTDTSTFAGDGAVDTGGDWGFN--GNNGWGCNAGGGGGGFSGVGGY
        FIILP+V VS  ++IT+CVL+I CRSRV NGK+  G    YDG Q+++ ID+                 GG  GFN   NNGWG +AGGGG  F G GGY
Subjt:  FIILPIVSVSIFIFITLCVLNINCRSRVYNGKIDSGR-HIYDGGQIDVAIDNGNDTDTSTFAGDGAVDTGGDWGFN--GNNGWGCNAGGGGGGFSGVGGY

Query:  DGGGGGGFGGGGGCDTGGGGGG
        D GGGGG GGGGGCD GGGGGG
Subjt:  DGGGGGGFGGGGGCDTGGGGGG

XP_022931866.1 glycine-rich protein 5-like [Cucurbita moschata]4.5e-0855.74Show/hide
Query:  FIILPIVSVSIFIFITLCVLNINCRSRVYNGKIDSGR-HIYDGGQIDVAIDNGNDTDTSTFAGDGAVDTGGDWGFN--GNNGWGCNAGGGGGGFSGVGGY
        FIILP+V VS  ++IT+CVL+I CRSRV NGK+  G    YDG Q+++ ID+                 GG  GFN   NNGWG +AGGGG  F G GGY
Subjt:  FIILPIVSVSIFIFITLCVLNINCRSRVYNGKIDSGR-HIYDGGQIDVAIDNGNDTDTSTFAGDGAVDTGGDWGFN--GNNGWGCNAGGGGGGFSGVGGY

Query:  DGGGGGGFGGGGGCDTGGGGGG
        D GGGGG GGGGGCD GGGGGG
Subjt:  DGGGGGGFGGGGGCDTGGGGGG

XP_038882331.1 glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]9.4e-1468.04Show/hide
Query:  RVYNGKIDSGRHIYDGGQIDVAIDNGNDTDTSTFAGDGAVDTGGDWGFNGNNGWGCNAGGGGGGF--SGVGGYDGGGGGGF--GGGGGCDTGGGGGG
        RV+NGKI +G   Y+GGQIDV I++ N+ +TSTF GD AVD GGDWGFN N+GWG + GGGG GF   G GGYDGGG GG   GGGGGCDTGGGGGG
Subjt:  RVYNGKIDSGRHIYDGGQIDVAIDNGNDTDTSTFAGDGAVDTGGDWGFNGNNGWGCNAGGGGGGF--SGVGGYDGGGGGGF--GGGGGCDTGGGGGG

TrEMBL top hitse value%identityAlignment
A0A6J1EUT9 glycine-rich protein 5-like2.2e-0855.74Show/hide
Query:  FIILPIVSVSIFIFITLCVLNINCRSRVYNGKIDSGR-HIYDGGQIDVAIDNGNDTDTSTFAGDGAVDTGGDWGFN--GNNGWGCNAGGGGGGFSGVGGY
        FIILP+V VS  ++IT+CVL+I CRSRV NGK+  G    YDG Q+++ ID+                 GG  GFN   NNGWG +AGGGG  F G GGY
Subjt:  FIILPIVSVSIFIFITLCVLNINCRSRVYNGKIDSGR-HIYDGGQIDVAIDNGNDTDTSTFAGDGAVDTGGDWGFN--GNNGWGCNAGGGGGGFSGVGGY

Query:  DGGGGGGFGGGGGCDTGGGGGG
        D GGGGG GGGGGCD GGGGGG
Subjt:  DGGGGGGFGGGGGCDTGGGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCAGCATTCATCATCTTGCCCATTGTCTCGGTTTCCATCTTTATCTTTATTACTTTATGTGTGTTGAATATTAATTGCCGGAGTAGAGTTTATAATGGCAA
AATTGACAGCGGCAGACACATTTACGATGGAGGCCAAATTGACGTAGCTATTGATAATGGGAATGATACGGATACAAGCACCTTCGCCGGAGATGGAGCTGTAGATACAG
GTGGTGATTGGGGTTTTAATGGCAATAATGGATGGGGCTGTAATGCTGGAGGTGGTGGCGGTGGCTTTAGTGGGGTAGGAGGATATGACGGTGGAGGTGGTGGCGGCTTC
GGTGGGGGAGGGGGATGCGATACTGGAGGCGGTGGTGGAGGTTCAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCAGCATTCATCATCTTGCCCATTGTCTCGGTTTCCATCTTTATCTTTATTACTTTATGTGTGTTGAATATTAATTGCCGGAGTAGAGTTTATAATGGCAA
AATTGACAGCGGCAGACACATTTACGATGGAGGCCAAATTGACGTAGCTATTGATAATGGGAATGATACGGATACAAGCACCTTCGCCGGAGATGGAGCTGTAGATACAG
GTGGTGATTGGGGTTTTAATGGCAATAATGGATGGGGCTGTAATGCTGGAGGTGGTGGCGGTGGCTTTAGTGGGGTAGGAGGATATGACGGTGGAGGTGGTGGCGGCTTC
GGTGGGGGAGGGGGATGCGATACTGGAGGCGGTGGTGGAGGTTCAACTTAG
Protein sequenceShow/hide protein sequence
MVQPAFIILPIVSVSIFIFITLCVLNINCRSRVYNGKIDSGRHIYDGGQIDVAIDNGNDTDTSTFAGDGAVDTGGDWGFNGNNGWGCNAGGGGGGFSGVGGYDGGGGGGF
GGGGGCDTGGGGGGST