; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017212 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017212
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationChr03:11952881..11953609
RNA-Seq ExpressionHG10017212
SyntenyHG10017212
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595345.1 hypothetical protein SDJN03_11898, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3759.68Show/hide
Query:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG
        MVRTAYIV PI+G  IIS V+ L CL  RR+VSK      R+SGSYVEGGNR IGIVVDDGS   TT    MF+G YGGWGWDWTFS++GDT    GN G
Subjt:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG

Query:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG
        GGCDV  GGGD + GG G     S++           G  D  G G GDG+GASFHEAGGGG          G GGG VSDHGGG S H+DGG S+FGGG
Subjt:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG

Query:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSFW
         +S   GGG   YDH    GGGGG SDY  GGGGGG+DFGG GGSSFW
Subjt:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSFW

XP_008450026.1 PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo]2.4e-1349.49Show/hide
Query:  VSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSG-SYGGWGWDWTFSNIGDTGNSGGGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGG
        +SK K K     G Y+EGGN S             TT SNMF+G SYGGWGWDWTFS +GDT N                      GG + +  G+ NGG
Subjt:  VSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSG-SYGGWGWDWTFSNIGDTGNSGGGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGG

Query:  LTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGGHYDHGGGGGGGGGFSDYGGGG
        +T       GG GG GSG S HE G      C  GGGD  GG GVS+HG GVSSHVD GG S+GGGG SS       DHGGGG GGGGFSD+GGGG
Subjt:  LTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGGHYDHGGGGGGGGGFSDYGGGG

XP_022931867.1 glycine-rich protein 23-like [Cucurbita moschata]7.5e-3658.87Show/hide
Query:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG
        MVRTAYIV PI+G  II  V+ L CL  RR+VSK      R+SGSYVEGGNR IGIVVDDGS   TT    MF+G YGGWGWDWTFS++GDT    GN G
Subjt:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG

Query:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG
        GGCDV  GGGD + GG G     S++           G  D  G G GDG+GASFHEAGGG           G GGG VSD GGG S H+DGG S+FGGG
Subjt:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG

Query:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSFW
         +S   GGG   YDH    GGGGG SDY  GGGGGG+DFGGGGGSSFW
Subjt:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSFW

XP_022966633.1 loricrin-like [Cucurbita maxima]5.1e-3260.34Show/hide
Query:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT--GNSGGGCDVEEGGGDGDGGGVGCYGGNS
        L CL  RR+VSK      R+SGSYVEGGNR IGIVVDDGS   TT    MF+G YGGWGWDWTFS++GDT  GN GGGCDV  GGGD + GG G     S
Subjt:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT--GNSGGGCDVEEGGGDGDGGGVGCYGGNS

Query:  EVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG---HYDHGGGG----
        +V           G  D  G G GDG+GASFHEAGGG           G GGG VSDHGGG S H+DGG S+F GGGASS+ GGG    +DHGGGG    
Subjt:  EVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG---HYDHGGGG----

Query:  ---GGGGGFSDYGGGGGGGGFDFGGGGGSSFW
           GGGGG SDY  GGGGGGFDFGGGGGSSFW
Subjt:  ---GGGGGFSDYGGGGGGGGFDFGGGGGSSFW

XP_023518097.1 glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]3.1e-2957.08Show/hide
Query:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDTGNSG----GGCDVEEGGGDGDGGGVGCYGG
        L CL  RR+VSK  G   R+SGS VEGGNR +GIVVDDGS   TT    MF+G YGGWGWDWTFS++GD+GN      GGCDV  GGGD + GG GC  G
Subjt:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDTGNSG----GGCDVEEGGGDGDGGGVGCYGG

Query:  NSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG--HYDHGGGG---
                          D    G GDG+GASFHEAGGG           G GGG VSDHGGG S H+DGG S+FGGG +S   GGG  +YDHGGGG   
Subjt:  NSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG--HYDHGGGG---

Query:  ----GGGGGFSDYGGGGGGGGFDFGGGGGSSFW
            GGGGG SDY  GGGGGG+DFGGGGGSSFW
Subjt:  ----GGGGGFSDYGGGGGGGGFDFGGGGGSSFW

TrEMBL top hitse value%identityAlignment
A0A0A0KXB6 Uncharacterized protein1.4e-1651.63Show/hide
Query:  ESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSG-SYGGWGWDWTFSNIGDTGNSGGGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRG
        ++G YVEGGN S             TT SNMFSG SYGGWGWDWTFS +GDT N G                     G + +  G+ NGGLT       G
Subjt:  ESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSG-SYGGWGWDWTFSNIGDTGNSGGGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRG

Query:  GGGGDGSGASFHEAGGGGVSSCDGGGGDGD-GGGGVSDHGGGVSSHVDGGGSSFGGGGASSYD------------GGGHYDHGGGGGGGGGFSDYGGGGG
        GGGG GS AS HE      + C    GDGD GGGGVSDHG GVSSHVDGGG S+GGGG SS D            GGG    GGGGGGGGG    GGGGG
Subjt:  GGGGDGSGASFHEAGGGGVSSCDGGGGDGD-GGGGVSDHGGGVSSHVDGGGSSFGGGGASSYD------------GGGHYDHGGGGGGGGGFSDYGGGGG

Query:  GGGFDFGGGGGSSFW
        GGGF   GGGGSS W
Subjt:  GGGFDFGGGGGSSFW

A0A1S3BNC1 glycine-rich cell wall structural protein 1.0-like1.1e-1349.49Show/hide
Query:  VSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSG-SYGGWGWDWTFSNIGDTGNSGGGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGG
        +SK K K     G Y+EGGN S             TT SNMF+G SYGGWGWDWTFS +GDT N                      GG + +  G+ NGG
Subjt:  VSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSG-SYGGWGWDWTFSNIGDTGNSGGGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGG

Query:  LTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGGHYDHGGGGGGGGGFSDYGGGG
        +T       GG GG GSG S HE G      C  GGGD  GG GVS+HG GVSSHVD GG S+GGGG SS       DHGGGG GGGGFSD+GGGG
Subjt:  LTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGGHYDHGGGGGGGGGFSDYGGGG

A0A5A7TNP5 Glycine-rich cell wall structural protein 1.0-like1.1e-1349.49Show/hide
Query:  VSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSG-SYGGWGWDWTFSNIGDTGNSGGGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGG
        +SK K K     G Y+EGGN S             TT SNMF+G SYGGWGWDWTFS +GDT N                      GG + +  G+ NGG
Subjt:  VSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSG-SYGGWGWDWTFSNIGDTGNSGGGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGG

Query:  LTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGGHYDHGGGGGGGGGFSDYGGGG
        +T       GG GG GSG S HE G      C  GGGD  GG GVS+HG GVSSHVD GG S+GGGG SS       DHGGGG GGGGFSD+GGGG
Subjt:  LTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGGHYDHGGGGGGGGGFSDYGGGG

A0A6J1EUX9 glycine-rich protein 23-like3.7e-3658.87Show/hide
Query:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG
        MVRTAYIV PI+G  II  V+ L CL  RR+VSK      R+SGSYVEGGNR IGIVVDDGS   TT    MF+G YGGWGWDWTFS++GDT    GN G
Subjt:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG

Query:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG
        GGCDV  GGGD + GG G     S++           G  D  G G GDG+GASFHEAGGG           G GGG VSD GGG S H+DGG S+FGGG
Subjt:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG

Query:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSFW
         +S   GGG   YDH    GGGGG SDY  GGGGGG+DFGGGGGSSFW
Subjt:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSFW

A0A6J1HSN5 loricrin-like2.5e-3260.34Show/hide
Query:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT--GNSGGGCDVEEGGGDGDGGGVGCYGGNS
        L CL  RR+VSK      R+SGSYVEGGNR IGIVVDDGS   TT    MF+G YGGWGWDWTFS++GDT  GN GGGCDV  GGGD + GG G     S
Subjt:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT--GNSGGGCDVEEGGGDGDGGGVGCYGGNS

Query:  EVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG---HYDHGGGG----
        +V           G  D  G G GDG+GASFHEAGGG           G GGG VSDHGGG S H+DGG S+F GGGASS+ GGG    +DHGGGG    
Subjt:  EVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG---HYDHGGGG----

Query:  ---GGGGGFSDYGGGGGGGGFDFGGGGGSSFW
           GGGGG SDY  GGGGGGFDFGGGGGSSFW
Subjt:  ---GGGGGFSDYGGGGGGGGFDFGGGGGSSFW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGAACAGCATACATCGTTTCGCCCATTCTTGGTGTTCTTATTATTTCTGTTGTTATAACTCTGTTGTGCTTGTTTCGGCGGAGGAAAGTTTCAAAGGAAAAAGG
TAAAAGTGCGAGAGAAAGTGGAAGTTATGTTGAAGGTGGAAACAGAAGCATTGGCATAGTTGTGGATGATGGGAGCAATAATATGACTACAACAGGCAGCAATATGTTTT
CCGGCAGTTATGGTGGTTGGGGTTGGGATTGGACTTTTAGTAATATAGGAGATACGGGCAACAGCGGAGGCGGCTGTGATGTTGAAGAAGGTGGCGGTGATGGTGACGGT
GGTGGTGTTGGGTGTTATGGAGGGAATAGTGAGGTTGTTGGAGGTGAAAATAATGGTGGCCTTACTGGAGGAATAAGTGATAACAGAGGAGGCGGTGGCGGAGATGGCAG
TGGAGCGAGTTTTCACGAGGCAGGCGGTGGTGGAGTGAGTTCTTGCGACGGAGGTGGTGGTGATGGAGATGGAGGTGGAGGGGTTTCTGATCATGGAGGTGGTGTGAGTT
CTCATGTGGATGGAGGAGGTTCTAGTTTTGGAGGTGGAGGAGCGAGTTCTTATGATGGCGGAGGACATTATGATCATGGCGGAGGTGGTGGTGGAGGTGGAGGGTTTTCT
GATTATGGAGGTGGTGGAGGGGGAGGGGGTTTTGATTTTGGAGGAGGCGGAGGATCATCTTTTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGAACAGCATACATCGTTTCGCCCATTCTTGGTGTTCTTATTATTTCTGTTGTTATAACTCTGTTGTGCTTGTTTCGGCGGAGGAAAGTTTCAAAGGAAAAAGG
TAAAAGTGCGAGAGAAAGTGGAAGTTATGTTGAAGGTGGAAACAGAAGCATTGGCATAGTTGTGGATGATGGGAGCAATAATATGACTACAACAGGCAGCAATATGTTTT
CCGGCAGTTATGGTGGTTGGGGTTGGGATTGGACTTTTAGTAATATAGGAGATACGGGCAACAGCGGAGGCGGCTGTGATGTTGAAGAAGGTGGCGGTGATGGTGACGGT
GGTGGTGTTGGGTGTTATGGAGGGAATAGTGAGGTTGTTGGAGGTGAAAATAATGGTGGCCTTACTGGAGGAATAAGTGATAACAGAGGAGGCGGTGGCGGAGATGGCAG
TGGAGCGAGTTTTCACGAGGCAGGCGGTGGTGGAGTGAGTTCTTGCGACGGAGGTGGTGGTGATGGAGATGGAGGTGGAGGGGTTTCTGATCATGGAGGTGGTGTGAGTT
CTCATGTGGATGGAGGAGGTTCTAGTTTTGGAGGTGGAGGAGCGAGTTCTTATGATGGCGGAGGACATTATGATCATGGCGGAGGTGGTGGTGGAGGTGGAGGGTTTTCT
GATTATGGAGGTGGTGGAGGGGGAGGGGGTTTTGATTTTGGAGGAGGCGGAGGATCATCTTTTTGGTGA
Protein sequenceShow/hide protein sequence
MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDTGNSGGGCDVEEGGGDGDG
GGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGGHYDHGGGGGGGGGFS
DYGGGGGGGGFDFGGGGGSSFW