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HG10017225 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017225
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein NRT1/ PTR FAMILY 5.6
Genome locationChr03:12034204..12035648
RNA-Seq ExpressionHG10017225
SyntenyHG10017225
Gene Ontology termsGO:0035442 - dipeptide transmembrane transport (biological process)
GO:0042939 - tripeptide transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0042937 - tripeptide transmembrane transporter activity (molecular function)
GO:0071916 - dipeptide transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595351.1 Protein NRT1/ PTR FAMILY 5.6, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1585.71Show/hide
Query:  MKRL-EEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        MK L E EEL RS+VNGGGG GGDDEKWVADSSVDYKGR+PLRASTG WKASLFII
Subjt:  MKRL-EEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII

XP_004147936.1 protein NRT1/ PTR FAMILY 5.6 [Cucumis sativus]6.6e-1890.91Show/hide
Query:  MKRLEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        MKRLE EEL RSQVNGGGG GGDDEKWVADSSVDYKGR+PLRASTG WKASLFII
Subjt:  MKRLEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII

XP_008448441.1 PREDICTED: protein NRT1/ PTR FAMILY 5.6 [Cucumis melo]2.1e-1683.64Show/hide
Query:  MKRLEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        MKR+E EEL RS++NGGG  GGDDEKWVADSSVDYKGR+PLRASTG WKASLFII
Subjt:  MKRLEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII

XP_022931876.1 protein NRT1/ PTR FAMILY 5.6-like [Cucurbita moschata]1.0e-1585.71Show/hide
Query:  MKRL-EEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        MK L E EEL RS+VNGGGG GGDDEKWVADSSVDYKGR+PLRASTG WKASLFII
Subjt:  MKRL-EEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII

XP_038881389.1 protein NRT1/ PTR FAMILY 5.6-like [Benincasa hispida]1.7e-1887.93Show/hide
Query:  MKRLEEEELHRSQVNGGG---GNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        MKRLEEEELHRSQVNGGG   G  GDDEKWVADSSVDYKGR+PLRASTG WKASLFII
Subjt:  MKRLEEEELHRSQVNGGG---GNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII

TrEMBL top hitse value%identityAlignment
A0A0A0KXC6 Uncharacterized protein3.2e-1890.91Show/hide
Query:  MKRLEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        MKRLE EEL RSQVNGGGG GGDDEKWVADSSVDYKGR+PLRASTG WKASLFII
Subjt:  MKRLEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII

A0A1S3BJN5 protein NRT1/ PTR FAMILY 5.61.0e-1683.64Show/hide
Query:  MKRLEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        MKR+E EEL RS++NGGG  GGDDEKWVADSSVDYKGR+PLRASTG WKASLFII
Subjt:  MKRLEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII

A0A5A7TPN1 Protein NRT1/ PTR FAMILY 5.65.6e-1582.69Show/hide
Query:  LEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        +E EEL RS++NGGG  GGDDEKWVADSSVDYKGR+PLRASTG WKASLFII
Subjt:  LEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII

A0A5D3DIZ3 Protein NRT1/ PTR FAMILY 5.65.6e-1582.69Show/hide
Query:  LEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        +E EEL RS++NGGG  GGDDEKWVADSSVDYKGR+PLRASTG WKASLFII
Subjt:  LEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII

A0A6J1EUU7 protein NRT1/ PTR FAMILY 5.6-like5.1e-1685.71Show/hide
Query:  MKRL-EEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        MK L E EEL RS+VNGGGG GGDDEKWVADSSVDYKGR+PLRASTG WKASLFII
Subjt:  MKRL-EEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFII

SwissProt top hitse value%identityAlignment
P0CI03 Protein NRT1/ PTR FAMILY 5.65.4e-0766.67Show/hide
Query:  DDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        D +KWV DSS+D +GR+PLRA TG W+A+LFII
Subjt:  DDEKWVADSSVDYKGRIPLRASTGTWKASLFII

Q9M331 Protein NRT1/ PTR FAMILY 5.71.6e-0666.67Show/hide
Query:  DDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        D +KWV DSS D +G IPLRA TG W+A+LFII
Subjt:  DDEKWVADSSVDYKGRIPLRASTGTWKASLFII

Arabidopsis top hitse value%identityAlignment
AT2G37900.1 Major facilitator superfamily protein3.9e-0866.67Show/hide
Query:  DDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        D +KWV DSS+D +GR+PLRA TG W+A+LFII
Subjt:  DDEKWVADSSVDYKGRIPLRASTGTWKASLFII

AT3G53960.1 Major facilitator superfamily protein1.1e-0766.67Show/hide
Query:  DDEKWVADSSVDYKGRIPLRASTGTWKASLFII
        D +KWV DSS D +G IPLRA TG W+A+LFII
Subjt:  DDEKWVADSSVDYKGRIPLRASTGTWKASLFII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGGTTGGAGGAGGAAGAATTGCATAGATCACAAGTTAATGGCGGCGGCGGCAACGGCGGCGATGATGAGAAATGGGTGGCTGATTCTTCAGTTGATTACAAAGG
GAGAATTCCTCTTAGAGCTTCCACTGGTACTTGGAAAGCCTCTCTCTTCATCATCGACAACTCAATTGATCACTCACAAGCTAGTCCCACCCCACCTCCACATATCTTGC
TTTGTGAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGGTTGGAGGAGGAAGAATTGCATAGATCACAAGTTAATGGCGGCGGCGGCAACGGCGGCGATGATGAGAAATGGGTGGCTGATTCTTCAGTTGATTACAAAGG
GAGAATTCCTCTTAGAGCTTCCACTGGTACTTGGAAAGCCTCTCTCTTCATCATCGACAACTCAATTGATCACTCACAAGCTAGTCCCACCCCACCTCCACATATCTTGC
TTTGTGAGCAATGA
Protein sequenceShow/hide protein sequence
MKRLEEEELHRSQVNGGGGNGGDDEKWVADSSVDYKGRIPLRASTGTWKASLFIIDNSIDHSQASPTPPPHILLCEQ