; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017254 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017254
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-CH-type domain-containing protein
Genome locationChr03:12324570..12326086
RNA-Seq ExpressionHG10017254
SyntenyHG10017254
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595366.1 hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sororia]1.4e-6277.71Show/hide
Query:  MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA
        MAALETAG DLE+G R      R    GEV KV+ ERDCRICHLGLESNSSE G  IELGC CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV V 
Subjt:  MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA

Query:  HELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
        HELEQMEQ HE NNGT+S   VAASVAA+P GGR FW VHRVLNFLL C+VFAFVISWLFHFNM S
Subjt:  HELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

KAG7027374.1 hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-6378.31Show/hide
Query:  MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA
        MAALETAG DLE+G R      RG+  GEV KV+ ERDCRICHLGLESNSSE G  IELGC CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV V 
Subjt:  MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA

Query:  HELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
        HELEQMEQ HE NNGT+S   VAASVAA+P GGR FW VHRVLNFLL C+VFAFVISWLFHFNM S
Subjt:  HELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

XP_022151515.1 uncharacterized protein LOC111019441, partial [Momordica charantia]2.8e-5870.06Show/hide
Query:  MAALETAG-ADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV
        +AA++T G ADLE+G        R S  GE ++   ERDCRICHLGLES+S E G+GIELGC CKNDLGAAHKHCAEAWFKIRGNKTCEICHS+V NV+ 
Subjt:  MAALETAG-ADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV

Query:  AHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
        AHE+E +EQ  ESNN TVS   VA SV   P+GGR+FW VHRVLNFLL CMVFAFVISWLFHFN+PS
Subjt:  AHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

XP_023517920.1 uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo]9.4e-6277.11Show/hide
Query:  MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA
        MAALETAG DLE+G R      R    GEV KV+ ERDCRICHLGLESNSSE G  IELGC CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV   
Subjt:  MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA

Query:  HELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
        HELEQMEQ HE NNGT+S   VAASV AAP GGR FW VHRVLNFLL C+VFAFVISWLFHFNM S
Subjt:  HELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

XP_038883458.1 uncharacterized protein LOC120074413 [Benincasa hispida]6.0e-7788.62Show/hide
Query:  MAALETAGADLEKGWRQTAAAERGSGVGEVKKV-NLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV
        MAALETAGADLEKGWRQT AAERGSGVGE  KV NLERDCRICHLGL SNS+EFGVGIELGCCCKNDL  AHKHCAEAWFKIRGNKTCEICHSIVRNVMV
Subjt:  MAALETAGADLEKGWRQTAAAERGSGVGEVKKV-NLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV

Query:  AHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
          E EQ EQ HESNNGTVS A VAASVAA PSGGR+FWHVHRVLNFLL CMVFAFVISWLFHFN+PS
Subjt:  AHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

TrEMBL top hitse value%identityAlignment
A0A0B0MSH9 E3 ubiquitin-protein ligase MARCH22.2e-4868.06Show/hide
Query:  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMV
        SG  E+K     +E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIRGNKTCEICHSI RNV+  +E+E  EQP+E+N+ T   A  
Subjt:  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMV

Query:  AASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
        A S AA+ +  R+FWH HR LNFLL CMVFAFVISWLFHFN+PS
Subjt:  AASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

A0A1U8HUU1 uncharacterized protein LOC1078897482.2e-4868.06Show/hide
Query:  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMV
        SG  E+K     +E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIRGNKTCEICHSI RNV+  +E+E  EQP+E+N+ T   A  
Subjt:  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMV

Query:  AASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
        A S AA+ +  R+FWH HR LNFLL CMVFAFVISWLFHFN+PS
Subjt:  AASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

A0A2P5YEN9 RING-CH-type domain-containing protein2.2e-4868.06Show/hide
Query:  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMV
        SG  E+K     +E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIRGNKTCEICHSI RNV+  +E+E  EQP+E+N+ T   A  
Subjt:  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMV

Query:  AASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
        A S AA+ +  R+FWH HR LNFLL CMVFAFVISWLFHFN+PS
Subjt:  AASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

A0A6A3CP99 Laccase-8-like1.5e-4968.75Show/hide
Query:  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMV
        SG  E+K      E++CRICHLGLESNS E GV IELGC CK+DL  AHKHCAEAWFKIRGNKTCEICHSI RNV++A+E+E MEQP+E+N+ T   A  
Subjt:  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMV

Query:  AASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
        A S AA+ S  R+FWH HR LNFLL CMVFAFVISWLFHF++PS
Subjt:  AASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

A0A6J1DBE4 uncharacterized protein LOC1110194411.4e-5870.06Show/hide
Query:  MAALETAG-ADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV
        +AA++T G ADLE+G        R S  GE ++   ERDCRICHLGLES+S E G+GIELGC CKNDLGAAHKHCAEAWFKIRGNKTCEICHS+V NV+ 
Subjt:  MAALETAG-ADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV

Query:  AHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
        AHE+E +EQ  ESNN TVS   VA SV   P+GGR+FW VHRVLNFLL CMVFAFVISWLFHFN+PS
Subjt:  AHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34200.1 RING/FYVE/PHD zinc finger superfamily protein1.7e-1651.22Show/hide
Query:  SGVGEVKKVNLERDCRICHLGLESNSSEFGVG-------IELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV
        SGVG       ER CRICH G + +    G         IE+GC CKN+LG AH HCAEAWFK+RGN  CEIC    +NV V
Subjt:  SGVGEVKKVNLERDCRICHLGLESNSSEFGVG-------IELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV

AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein9.1e-3150.36Show/hide
Query:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEL--EQMEQPHESNNGTVSMAMVAASVAAAPSGG
        E+DCRICHLG+E++    G  IELGC CK+DL  AH+ CAE WFKI+G+KTCEIC S+ RNV  A+E+    ME+  E  NG           AA   GG
Subjt:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEL--EQMEQPHESNNGTVSMAMVAASVAAAPSGG

Query:  ----RNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
             N W   RV+N +L CMVF F ISW+FHF++ S
Subjt:  ----RNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein1.5e-3354.55Show/hide
Query:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM-VAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGR
        E+DCRICHLGLES+  E G  + LGC CK+DLG  HK CA+ WFKI+GNKTCEIC SI +N   V +E+ Q     E+N   V        VA + S  R
Subjt:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM-VAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGR

Query:  NFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
             +R LNFLL CMV AFVISW FHFN+PS
Subjt:  NFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein1.8e-3958.78Show/hide
Query:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRN
        ERDCRICH+ L++ + E GV IELGC CK DL AAHKHCAE WFKI+GNK CE+C SI  NV+ + E+E  E  +E+ NG  ++ +  +        GR+
Subjt:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRN

Query:  FWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
        FW  HR LNFLL CMVFAFVISWLFHFN+PS
Subjt:  FWHVHRVLNFLLVCMVFAFVISWLFHFNMPS

AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein6.8e-2641.21Show/hide
Query:  KKVNLERDCRICHLGLESNSSE-------------------------------FGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV
        KK    RDCRICHL LE+N                                  +G+ ++LGC CK DLG AH  CAE WFKI+GN TCEIC ++  NV  
Subjt:  KKVNLERDCRICHLGLESNSSE-------------------------------FGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV

Query:  AHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNM
             +   P ES   T S A  AA  +   +  R  WH   V+NFLL  MVFAFV+SWLFHF +
Subjt:  AHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTTAGAGACGGCCGGAGCGGATTTGGAGAAAGGGTGGCGGCAGACGGCGGCGGCGGAGAGGGGAAGTGGAGTTGGTGAAGTGAAGAAGGTGAATTTGGAGAG
GGATTGTAGGATTTGCCATTTGGGATTAGAAAGCAATAGCAGTGAGTTTGGAGTTGGAATTGAATTGGGTTGTTGTTGTAAGAATGATTTGGGTGCTGCTCATAAGCATT
GTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACATGTGAGATATGTCATTCTATTGTAAGAAATGTAATGGTAGCACATGAACTTGAACAAATGGAGCAACCCCAT
GAGTCAAACAATGGGACGGTATCAATGGCCATGGTTGCAGCGTCGGTGGCTGCCGCTCCTAGCGGTGGCCGGAACTTTTGGCATGTTCATCGAGTCCTCAATTTTCTTCT
TGTTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTCCATTTCAATATGCCATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTTTAGAGACGGCCGGAGCGGATTTGGAGAAAGGGTGGCGGCAGACGGCGGCGGCGGAGAGGGGAAGTGGAGTTGGTGAAGTGAAGAAGGTGAATTTGGAGAG
GGATTGTAGGATTTGCCATTTGGGATTAGAAAGCAATAGCAGTGAGTTTGGAGTTGGAATTGAATTGGGTTGTTGTTGTAAGAATGATTTGGGTGCTGCTCATAAGCATT
GTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACATGTGAGATATGTCATTCTATTGTAAGAAATGTAATGGTAGCACATGAACTTGAACAAATGGAGCAACCCCAT
GAGTCAAACAATGGGACGGTATCAATGGCCATGGTTGCAGCGTCGGTGGCTGCCGCTCCTAGCGGTGGCCGGAACTTTTGGCATGTTCATCGAGTCCTCAATTTTCTTCT
TGTTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTCCATTTCAATATGCCATCATAA
Protein sequenceShow/hide protein sequence
MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPH
ESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS