; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017262 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017262
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTubulin beta chain
Genome locationChr03:12384222..12385952
RNA-Seq ExpressionHG10017262
SyntenyHG10017262
Gene Ontology termsGO:0007010 - cytoskeleton organization (biological process)
GO:0007017 - microtubule-based process (biological process)
GO:0009733 - response to auxin (biological process)
GO:0005874 - microtubule (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005200 - structural constituent of cytoskeleton (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR000217 - Tubulin
IPR002453 - Beta tubulin
IPR003008 - Tubulin/FtsZ, GTPase domain
IPR008280 - Tubulin/FtsZ, C-terminal
IPR013838 - Beta tubulin, autoregulation binding site
IPR017975 - Tubulin, conserved site
IPR036525 - Tubulin/FtsZ, GTPase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KHG25436.1 Tubulin beta-8 chain -like protein [Gossypium arboreum]1.5e-14191.07Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TGKY GDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPSC-------------EGMDEMEFTEAESNMNDLVSEYQQYQDATA-DEEYYDEEEEDAED
        VLDNEALYDICFRTLKLTTPS              EGMDEMEFTEAESNMNDLVSEYQQYQDATA DEE Y+EEEE+ +D
Subjt:  VLDNEALYDICFRTLKLTTPSC-------------EGMDEMEFTEAESNMNDLVSEYQQYQDATA-DEEYYDEEEEDAED

KZM86908.1 hypothetical protein DCAR_024042 [Daucus carota subsp. sativus]1.0e-14292.91Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEV+CAEHGID+TG+YQGD+D+QLERINVYYNEAS  RYVPRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEE--YYDEEEEDAED
        VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y+++EEE+ ++
Subjt:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEE--YYDEEEEDAED

OIV95983.1 hypothetical protein TanjilG_27087 [Lupinus angustifolius]1.5e-14193.18Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEV+C EHGID TGKY GD++LQLERINVYYNEAS GRYVPRAVLMDLEPGTMDS+RSG +GQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDA
        VLDNEALYDICFRTLKL TP+CEGMDEMEFTEAESNMNDLV+EYQQYQDATADEE Y++EEE+A
Subjt:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDA

PKU64640.1 Tubulin beta-1 chain [Dendrobium catenatum]1.9e-14192.16Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILHVQGGQCGNQIG+KFWEVVC EHGID TG+Y G SDLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDS+R+G YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAEDNV
        VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEE   E++E+A  ++
Subjt:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAEDNV

THU65112.1 hypothetical protein C4D60_Mb05t00210 [Musa balbisiana]7.3e-14193.21Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILHVQGGQCGNQIGAKFWEV+C EHGID TG+Y GDSDLQLERINVYYNE+S GRYVPRAVLMDLEPGTMDS+RSG +GQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE
        VLDNEALYDICFRTLKL TP+CEGMDEMEFTEAESNMNDLV+EYQQYQDATAD E Y+EEEE+ E
Subjt:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE

TrEMBL top hitse value%identityAlignment
A0A0B0PPV7 Tubulin beta chain7.2e-14291.07Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TGKY GDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPSC-------------EGMDEMEFTEAESNMNDLVSEYQQYQDATA-DEEYYDEEEEDAED
        VLDNEALYDICFRTLKLTTPS              EGMDEMEFTEAESNMNDLVSEYQQYQDATA DEE Y+EEEE+ +D
Subjt:  VLDNEALYDICFRTLKLTTPSC-------------EGMDEMEFTEAESNMNDLVSEYQQYQDATA-DEEYYDEEEEDAED

A0A164T0W6 Tubulin beta chain5.0e-14392.91Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEV+CAEHGID+TG+YQGD+D+QLERINVYYNEAS  RYVPRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEE--YYDEEEEDAED
        VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y+++EEE+ ++
Subjt:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEE--YYDEEEEDAED

A0A2I0VMK4 Tubulin beta chain9.3e-14292.16Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILHVQGGQCGNQIG+KFWEVVC EHGID TG+Y G SDLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDS+R+G YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAEDNV
        VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEE   E++E+A  ++
Subjt:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAEDNV

A0A4P1QVW7 Tubulin beta chain7.2e-14293.18Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEV+C EHGID TGKY GD++LQLERINVYYNEAS GRYVPRAVLMDLEPGTMDS+RSG +GQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDA
        VLDNEALYDICFRTLKL TP+CEGMDEMEFTEAESNMNDLV+EYQQYQDATADEE Y++EEE+A
Subjt:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDA

A0A4S8JSM3 Tubulin beta chain3.6e-14193.21Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILHVQGGQCGNQIGAKFWEV+C EHGID TG+Y GDSDLQLERINVYYNE+S GRYVPRAVLMDLEPGTMDS+RSG +GQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE
        VLDNEALYDICFRTLKL TP+CEGMDEMEFTEAESNMNDLV+EYQQYQDATAD E Y+EEEE+ E
Subjt:  VLDNEALYDICFRTLKLTTPSCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE

SwissProt top hitse value%identityAlignment
P29516 Tubulin beta-8 chain4.8e-12795.93Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+YQG++DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPS
        VLDNEALYDICFRTLKLTTPS
Subjt:  VLDNEALYDICFRTLKLTTPS

P29516 Tubulin beta-8 chain1.8e-0984.09Show/hide
Query:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEY-YDEEEEDAE
        EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y+ EE++ E
Subjt:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEY-YDEEEEDAE

P37392 Tubulin beta-1 chain3.1e-12695.48Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+Y GD++LQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPS
        VLDNEALYDICFRTLKLTTPS
Subjt:  VLDNEALYDICFRTLKLTTPS

P37392 Tubulin beta-1 chain6.3e-1085.37Show/hide
Query:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEED
        EGMDEMEFTEAESNMNDLVSEYQQYQDATADE+ Y+ E+E+
Subjt:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEED

Q40106 Tubulin beta-2 chain3.1e-12695.48Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+Y+GD+ LQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPS
        VLDNEALYDICFRTLKLTTPS
Subjt:  VLDNEALYDICFRTLKLTTPS

Q40106 Tubulin beta-2 chain4.8e-1085.11Show/hide
Query:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADE---EYYDEEEEDAED
        EGMDEMEFTEAESNMNDLVSEYQQYQDATADE   EY DEEE   ED
Subjt:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADE---EYYDEEEEDAED

Q56YW9 Tubulin beta-2 chain2.4e-12696.38Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+VPRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPS
        VLDNEALYDICFRTLKLTTPS
Subjt:  VLDNEALYDICFRTLKLTTPS

Q56YW9 Tubulin beta-2 chain8.2e-1086.05Show/hide
Query:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE
        EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE   E+EE+ E
Subjt:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE

Q9ASR0 Tubulin beta-3 chain2.4e-12696.38Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+VPRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPS
        VLDNEALYDICFRTLKLTTPS
Subjt:  VLDNEALYDICFRTLKLTTPS

Q9ASR0 Tubulin beta-3 chain8.2e-1086.05Show/hide
Query:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE
        EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE   E+EE+ E
Subjt:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE

Arabidopsis top hitse value%identityAlignment
AT5G12250.1 beta-6 tubulin5.4e-12694.12Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIG+KFWEVVC EHGID TG+Y G+SDLQLER+NVYYNEASCGRYVPRA+LMDLEPGTMDS+R+G YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPS
        VLDNEALYDICFRTLKLTTPS
Subjt:  VLDNEALYDICFRTLKLTTPS

AT5G12250.1 beta-6 tubulin4.5e-1184.09Show/hide
Query:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAED
        EGMDEMEFTEAESNMNDLVSEYQQYQDATAD+E   EE+ED E+
Subjt:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAED

AT5G23860.1 tubulin beta 83.4e-12895.93Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+YQG++DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPS
        VLDNEALYDICFRTLKLTTPS
Subjt:  VLDNEALYDICFRTLKLTTPS

AT5G23860.1 tubulin beta 81.3e-1084.09Show/hide
Query:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEY-YDEEEEDAE
        EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y+ EE++ E
Subjt:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEY-YDEEEEDAE

AT5G23860.2 tubulin beta 83.4e-12895.93Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID+TG+YQG++DLQLER+NVYYNEASCGR+VPRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPS
        VLDNEALYDICFRTLKLTTPS
Subjt:  VLDNEALYDICFRTLKLTTPS

AT5G23860.2 tubulin beta 81.3e-1084.09Show/hide
Query:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEY-YDEEEEDAE
        EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y+ EE++ E
Subjt:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEY-YDEEEEDAE

AT5G62690.1 tubulin beta chain 21.7e-12796.38Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+VPRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPS
        VLDNEALYDICFRTLKLTTPS
Subjt:  VLDNEALYDICFRTLKLTTPS

AT5G62690.1 tubulin beta chain 25.8e-1186.05Show/hide
Query:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE
        EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE   E+EE+ E
Subjt:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE

AT5G62700.1 tubulin beta chain 31.7e-12796.38Show/hide
Query:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN
        MREILH+QGGQCGNQIGAKFWEVVCAEHGID TG+Y GDSDLQLERINVYYNEASCGR+VPRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNN
Subjt:  MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNN

Query:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
        WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM
Subjt:  WAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECM

Query:  VLDNEALYDICFRTLKLTTPS
        VLDNEALYDICFRTLKLTTPS
Subjt:  VLDNEALYDICFRTLKLTTPS

AT5G62700.1 tubulin beta chain 35.8e-1186.05Show/hide
Query:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE
        EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE   E+EE+ E
Subjt:  EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAGATCCTTCACGTTCAGGGTGGCCAATGTGGTAACCAGATCGGTGCTAAGTTCTGGGAAGTTGTTTGCGCCGAGCATGGCATTGATACCACCGGAAAGTACCA
GGGAGATTCCGATCTTCAGCTTGAGAGGATTAATGTCTACTACAATGAAGCCAGTTGCGGGAGGTATGTGCCTCGCGCTGTTCTTATGGATCTTGAGCCTGGTACTATGG
ATAGTATCAGATCTGGCCTTTATGGACAGATCTTCAGGCCGGATAACTTTGTTTTTGGTCAATCTGGTGCTGGTAACAACTGGGCTAAAGGTCATTACACTGAAGGCGCT
GAGCTTATTGATTCCGTCCTCGATGTCGTCCGTAAGGAGGCGGAGAACTGTGATTGCTTGCAAGGGTTTCAGGTGTGCCATTCTCTAGGAGGGGGAACTGGATCTGGAAT
GGGAACTCTTCTGATTTCGAAGATTAGAGAAGAATACCCCGACAGGATGATGCTTACCTTCTCTGTCTTTCCGTCTCCCAAGGTTTCCGATACTGTTGTTGAGCCTTACA
ACGCTACTCTCTCAGTTCATCAACTGGTCGAAAATGCAGACGAGTGCATGGTTCTTGACAATGAAGCTCTCTATGATATCTGCTTCCGTACCCTCAAGCTCACCACTCCA
AGCTGTGAAGGTATGGACGAGATGGAGTTCACAGAGGCTGAAAGTAACATGAATGATCTGGTTTCTGAGTATCAGCAGTACCAAGACGCCACAGCTGATGAGGAATATTA
CGATGAAGAAGAAGAGGATGCTGAAGATAATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAGATCCTTCACGTTCAGGGTGGCCAATGTGGTAACCAGATCGGTGCTAAGTTCTGGGAAGTTGTTTGCGCCGAGCATGGCATTGATACCACCGGAAAGTACCA
GGGAGATTCCGATCTTCAGCTTGAGAGGATTAATGTCTACTACAATGAAGCCAGTTGCGGGAGGTATGTGCCTCGCGCTGTTCTTATGGATCTTGAGCCTGGTACTATGG
ATAGTATCAGATCTGGCCTTTATGGACAGATCTTCAGGCCGGATAACTTTGTTTTTGGTCAATCTGGTGCTGGTAACAACTGGGCTAAAGGTCATTACACTGAAGGCGCT
GAGCTTATTGATTCCGTCCTCGATGTCGTCCGTAAGGAGGCGGAGAACTGTGATTGCTTGCAAGGGTTTCAGGTGTGCCATTCTCTAGGAGGGGGAACTGGATCTGGAAT
GGGAACTCTTCTGATTTCGAAGATTAGAGAAGAATACCCCGACAGGATGATGCTTACCTTCTCTGTCTTTCCGTCTCCCAAGGTTTCCGATACTGTTGTTGAGCCTTACA
ACGCTACTCTCTCAGTTCATCAACTGGTCGAAAATGCAGACGAGTGCATGGTTCTTGACAATGAAGCTCTCTATGATATCTGCTTCCGTACCCTCAAGCTCACCACTCCA
AGCTGTGAAGGTATGGACGAGATGGAGTTCACAGAGGCTGAAAGTAACATGAATGATCTGGTTTCTGAGTATCAGCAGTACCAAGACGCCACAGCTGATGAGGAATATTA
CGATGAAGAAGAAGAGGATGCTGAAGATAATGTGTAA
Protein sequenceShow/hide protein sequence
MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGA
ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTP
SCEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDAEDNV