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HG10017275 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017275
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionjosephin-like protein
Genome locationChr03:12536938..12537297
RNA-Seq ExpressionHG10017275
SyntenyHG10017275
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603596.1 hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia]8.8e-3874.24Show/hide
Query:  MSTKLSSSRRVSFSSDQ-----ATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKR----------SSSSSSKNCSNFN
        MSTKLSSSRRVSFSSDQ     +  KP  FPRNRKR ITVFWVFRLPKSGR  P +FLRR+GAKV KVLRYVSLRKR          SSSSS K+ SNFN
Subjt:  MSTKLSSSRRVSFSSDQ-----ATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKR----------SSSSSSKNCSNFN

Query:  RSHSVSDSMEESHRAEAVKDCIKFFNSSNSSS
        RSHSVS+SMEESHRAEAVKDCI FFNSS+SS+
Subjt:  RSHSVSDSMEESHRAEAVKDCIKFFNSSNSSS

KGN54361.1 hypothetical protein Csa_017994 [Cucumis sativus]2.0e-3776.98Show/hide
Query:  MSTKLSSSRRVSFSSDQATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSSSKN-------CSNFNRSHSVSDS
        MSTKLSS RRVSFSSDQA    +   R RKRPI VFWVFRLPKS RFSPE FLRRLGAK+AKVLRYVSLRKRS+SS++ +        S FNRSHSVSDS
Subjt:  MSTKLSSSRRVSFSSDQATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSSSKN-------CSNFNRSHSVSDS

Query:  MEESHRAEAVKDCIKFFNSSNSSSAV
        MEESHRAEAVKDCI+FFNSSNSSSAV
Subjt:  MEESHRAEAVKDCIKFFNSSNSSSAV

XP_022950374.1 josephin-like protein [Cucurbita moschata]2.3e-3877.17Show/hide
Query:  MSTKLSSSRRVSFSSDQ------ATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRS----SSSSSKNCSNFNRSHSV
        MSTKLSSSRRVSFSSDQ      +  KP  FPRNRKR ITVFWVFRLPKSGR  P +FLRR+GAKV KVLRYVSLRKRS    SSSS K+ SNFNRSHSV
Subjt:  MSTKLSSSRRVSFSSDQ------ATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRS----SSSSSKNCSNFNRSHSV

Query:  SDSMEESHRAEAVKDCIKFFNSSNSSS
        S+SMEESHRAEAVKDCI FFNSS+SS+
Subjt:  SDSMEESHRAEAVKDCIKFFNSSNSSS

XP_022977351.1 uncharacterized protein LOC111477703 [Cucurbita maxima]1.2e-3776.38Show/hide
Query:  MSTKLSSSRRVSFSSDQ----ATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKR-------SSSSSSKNCSNFNRSHS
        MSTKLSSSRRVSFSSDQ    A  KP  FPRNRKR ITVFWVF+LPKSGR  P +FLRR+GAKV KVLRYVSLRKR       SSSSS K+ SNFNRSHS
Subjt:  MSTKLSSSRRVSFSSDQ----ATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKR-------SSSSSSKNCSNFNRSHS

Query:  VSDSMEESHRAEAVKDCIKFFNSSNSS
        VS+SMEESHRAEAVKDCI FFNSS+S+
Subjt:  VSDSMEESHRAEAVKDCIKFFNSSNSS

XP_023518083.1 uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo]1.4e-3575Show/hide
Query:  TKLSSSRRVSFSSDQATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSS-SSSSKNCSNFNRSHSVSDSMEESHRAE
        +K+ SSR VS  SD+ T KPTT  RNRKR ITV WVFRLPKSGRFSPE+FLRR+GAKVAKV+RYVSL+KRS  S  +   +NFNRSHSVSDSMEESHRAE
Subjt:  TKLSSSRRVSFSSDQATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSS-SSSSKNCSNFNRSHSVSDSMEESHRAE

Query:  AVKDCIKFFNSSNSSS
        AVKDCI FFNSS+SS+
Subjt:  AVKDCIKFFNSSNSSS

TrEMBL top hitse value%identityAlignment
A0A061EQH2 Uncharacterized protein3.3e-1447.54Show/hide
Query:  SSRRVSFSSDQATGKPTTFPR----------NRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSS-SKNCSNFNRSHSVSDSME
        +S+RVSFS D    +PT   +          NR+R +   + FRL +S RFSP   LRRLGAKVA+ LR+VS+R+ S+S   S + SN  RS S+++S+ 
Subjt:  SSRRVSFSSDQATGKPTTFPR----------NRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSS-SKNCSNFNRSHSVSDSME

Query:  ESHRAEAVKDCIKFFNSSNSSS
        +SHRAEA++DCI+F NSS+S S
Subjt:  ESHRAEAVKDCIKFFNSSNSSS

A0A0A0L2K7 Uncharacterized protein9.5e-3876.98Show/hide
Query:  MSTKLSSSRRVSFSSDQATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSSSKN-------CSNFNRSHSVSDS
        MSTKLSS RRVSFSSDQA    +   R RKRPI VFWVFRLPKS RFSPE FLRRLGAK+AKVLRYVSLRKRS+SS++ +        S FNRSHSVSDS
Subjt:  MSTKLSSSRRVSFSSDQATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSSSKN-------CSNFNRSHSVSDS

Query:  MEESHRAEAVKDCIKFFNSSNSSSAV
        MEESHRAEAVKDCI+FFNSSNSSSAV
Subjt:  MEESHRAEAVKDCIKFFNSSNSSSAV

A0A2N9FAM8 Uncharacterized protein4.3e-1450.85Show/hide
Query:  SSRRVSFSSDQATGKPTTFPRN---------RKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSSSKNCSNFNRSHSVSDSMEES
        +S+RVSFS D    KPT F ++         RKR I V W FRLPK   FSP  FL+RL AKV   +R++S+R+R S   S   S+  RSHSVSD M +S
Subjt:  SSRRVSFSSDQATGKPTTFPRN---------RKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSSSKNCSNFNRSHSVSDSMEES

Query:  HRAEAVKDCIKFFNSSNS
        HRAEA++DCI+F NSS++
Subjt:  HRAEAVKDCIKFFNSSNS

A0A6J1GFL9 josephin-like protein1.1e-3877.17Show/hide
Query:  MSTKLSSSRRVSFSSDQ------ATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRS----SSSSSKNCSNFNRSHSV
        MSTKLSSSRRVSFSSDQ      +  KP  FPRNRKR ITVFWVFRLPKSGR  P +FLRR+GAKV KVLRYVSLRKRS    SSSS K+ SNFNRSHSV
Subjt:  MSTKLSSSRRVSFSSDQ------ATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRS----SSSSSKNCSNFNRSHSV

Query:  SDSMEESHRAEAVKDCIKFFNSSNSSS
        S+SMEESHRAEAVKDCI FFNSS+SS+
Subjt:  SDSMEESHRAEAVKDCIKFFNSSNSSS

A0A6J1IJN3 uncharacterized protein LOC1114777035.6e-3876.38Show/hide
Query:  MSTKLSSSRRVSFSSDQ----ATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKR-------SSSSSSKNCSNFNRSHS
        MSTKLSSSRRVSFSSDQ    A  KP  FPRNRKR ITVFWVF+LPKSGR  P +FLRR+GAKV KVLRYVSLRKR       SSSSS K+ SNFNRSHS
Subjt:  MSTKLSSSRRVSFSSDQ----ATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKR-------SSSSSSKNCSNFNRSHS

Query:  VSDSMEESHRAEAVKDCIKFFNSSNSS
        VS+SMEESHRAEAVKDCI FFNSS+S+
Subjt:  VSDSMEESHRAEAVKDCIKFFNSSNSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07300.1 josephin protein-related1.9e-0636.63Show/hide
Query:  ATGKPTTF--PRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSSSKNCSNFNRSH-SVSDSMEESHRAEAVKDCIKFFNSSN
        A+ K T    P  +    T     RLP+    +    ++ LG K AK LR V +RK+  S  SK  S   RS   +     +SHR+EA++DCI+F NSS+
Subjt:  ATGKPTTF--PRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSSSKNCSNFNRSH-SVSDSMEESHRAEAVKDCIKFFNSSN

Query:  S
        S
Subjt:  S

AT3G09032.1 unknown protein1.7e-0733.59Show/hide
Query:  RRVSFS-SDQATGKPTTFPR--------NRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKR--------------SSSSSSKNCSNFN
        +RVSF+ + +AT +P  FP+        + +R + +  +         +    ++R+GA+ AK LR++S R+               SSSSSS +     
Subjt:  RRVSFS-SDQATGKPTTFPR--------NRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKR--------------SSSSSSKNCSNFN

Query:  RSHSVSDSMEESHRAEAVKDCIKFFNSS
        RS SV+++  ESHRAEA++DCI+F NSS
Subjt:  RSHSVSDSMEESHRAEAVKDCIKFFNSS

AT5G01225.1 unknown protein8.6e-0735.54Show/hide
Query:  SSRRVSFSSDQATGKPTTFP------RNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSL----RKRSSSSSSKNCSNFNRSHSVSDSMEE
        +S+RV FS D        FP        R+R +   + F    S   + +  LR +G +V K  RY+S      K + SSSS   S+     S S +  E
Subjt:  SSRRVSFSSDQATGKPTTFP------RNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSL----RKRSSSSSSKNCSNFNRSHSVSDSMEE

Query:  SHRAEAVKDCIKFFNSSNSSS
        SHRAEA++DCI+F NS +S S
Subjt:  SHRAEAVKDCIKFFNSSNSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACAAAATTAAGCTCAAGCAGAAGAGTTAGTTTCAGCTCAGATCAAGCGACGGGGAAGCCCACAACTTTCCCAAGAAATAGGAAAAGGCCGATCACCGTCTTCTG
GGTTTTCCGGCTACCAAAATCCGGCAGATTCTCGCCGGAAAATTTCCTCCGCCGTCTCGGAGCCAAAGTGGCCAAAGTTCTACGGTATGTTTCGTTGAGAAAGAGATCTT
CGTCTTCTTCGTCGAAAAATTGTTCAAATTTCAATAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTTAAAGATTGTATCAAGTTCTTT
AACTCTTCAAATTCTTCTTCAGCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACAAAATTAAGCTCAAGCAGAAGAGTTAGTTTCAGCTCAGATCAAGCGACGGGGAAGCCCACAACTTTCCCAAGAAATAGGAAAAGGCCGATCACCGTCTTCTG
GGTTTTCCGGCTACCAAAATCCGGCAGATTCTCGCCGGAAAATTTCCTCCGCCGTCTCGGAGCCAAAGTGGCCAAAGTTCTACGGTATGTTTCGTTGAGAAAGAGATCTT
CGTCTTCTTCGTCGAAAAATTGTTCAAATTTCAATAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTTAAAGATTGTATCAAGTTCTTT
AACTCTTCAAATTCTTCTTCAGCTGTTTGA
Protein sequenceShow/hide protein sequence
MSTKLSSSRRVSFSSDQATGKPTTFPRNRKRPITVFWVFRLPKSGRFSPENFLRRLGAKVAKVLRYVSLRKRSSSSSSKNCSNFNRSHSVSDSMEESHRAEAVKDCIKFF
NSSNSSSAV