; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017285 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017285
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description30S ribosomal protein S31, chloroplastic
Genome locationChr03:12617175..12617752
RNA-Seq ExpressionHG10017285
SyntenyHG10017285
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147884.1 30S ribosomal protein S31, chloroplastic [Cucumis sativus]2.8e-4788.52Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIST-SSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP
        MASLPFGLLQA SQ    SPRFFSFSKSE LGTSLRASSTASLAIST SSP SIPA+YCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVP PPSPP
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIST-SSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAN
        RKDKFDD+EKIKIEIDESLF +
Subjt:  RKDKFDDDEKIKIEIDESLFAN

XP_008449316.1 PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo]9.3e-5190.98Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIST-SSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP
        M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRASSTASLAIST SSP SIPAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVP PPSPP
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIST-SSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAN
        RKDKFDDDEKIKIEIDESLFA+
Subjt:  RKDKFDDDEKIKIEIDESLFAN

XP_022151467.1 30S ribosomal protein S31, chloroplastic [Momordica charantia]7.8e-5091.74Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIS-TSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP
        MASLPFGLLQA SQSPTLSPRFFSFSKSETLGTSLRA STASLA S TSSP S+PAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVP PP+PP
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIS-TSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP

Query:  RKDKFDDDEKIKIEIDESLFA
        RKDKF+DDEKIKIEID+SLFA
Subjt:  RKDKFDDDEKIKIEIDESLFA

XP_022931892.1 30S ribosomal protein S31, chloroplastic-like [Cucurbita moschata]2.4e-4686.67Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPPR
        MASLPFGLLQA  QSPTLSPR FSFSKSETLGTSLR S+  S   +TSSP SIPAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVP PPSPPR
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPPR

Query:  KDKFDDDEKIKIEIDESLFA
        KDKFDDDEKIKIEIDESLF+
Subjt:  KDKFDDDEKIKIEIDESLFA

XP_038882305.1 30S ribosomal protein S31, chloroplastic [Benincasa hispida]1.4e-5193.44Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIS-TSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP
        MASLPFGLLQA SQSPTLSPRFFSFSKSETLGTSLRASSTASLA S TSSP SIPAVYCGRGDKKTEKGKRFN SYGNARPR+KTKGRGTPRVP PPSPP
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIS-TSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAN
        RKDKF+DDEKIKIEIDESLFAN
Subjt:  RKDKFDDDEKIKIEIDESLFAN

TrEMBL top hitse value%identityAlignment
A0A0A0KXY4 Uncharacterized protein1.3e-4788.52Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIST-SSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP
        MASLPFGLLQA SQ    SPRFFSFSKSE LGTSLRASSTASLAIST SSP SIPA+YCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVP PPSPP
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIST-SSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAN
        RKDKFDD+EKIKIEIDESLF +
Subjt:  RKDKFDDDEKIKIEIDESLFAN

A0A1S3BL51 30S ribosomal protein S31, chloroplastic4.5e-5190.98Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIST-SSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP
        M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRASSTASLAIST SSP SIPAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVP PPSPP
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIST-SSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAN
        RKDKFDDDEKIKIEIDESLFA+
Subjt:  RKDKFDDDEKIKIEIDESLFAN

A0A5A7TU27 30S ribosomal protein S314.5e-5190.98Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIST-SSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP
        M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRASSTASLAIST SSP SIPAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVP PPSPP
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIST-SSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP

Query:  RKDKFDDDEKIKIEIDESLFAN
        RKDKFDDDEKIKIEIDESLFA+
Subjt:  RKDKFDDDEKIKIEIDESLFAN

A0A6J1DDL3 30S ribosomal protein S31, chloroplastic3.8e-5091.74Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIS-TSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP
        MASLPFGLLQA SQSPTLSPRFFSFSKSETLGTSLRA STASLA S TSSP S+PAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVP PP+PP
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAIS-TSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP

Query:  RKDKFDDDEKIKIEIDESLFA
        RKDKF+DDEKIKIEID+SLFA
Subjt:  RKDKFDDDEKIKIEIDESLFA

A0A6J1HRX4 30S ribosomal protein S31, chloroplastic1.1e-4686.67Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPPR
        MASLPFGLLQA  QSPTLSPR FSFSKSETLGTSLR S+  S   +TSSP SIPAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVP PPSPPR
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPPR

Query:  KDKFDDDEKIKIEIDESLFA
        KDKFDDDEKIKIEIDESLF+
Subjt:  KDKFDDDEKIKIEIDESLFA

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic1.2e-2962.81Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPPR
        MASL  G    V+ +  L     S S SET G SL +  T   ++STSS  SIP VYCGRGD+KT KGKRFNHS+GNARPR+K+KGRG  RVP PP+PPR
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPPR

Query:  KDKFDDDEKIKIEIDESLFAN
        KDKF++DEKIKI+IDESLF+N
Subjt:  KDKFDDDEKIKIEIDESLFAN

P47909 30S ribosomal protein S31, mitochondrial3.6e-0563.04Show/hide
Query:  AVYCGRGDKKTEKGKRFNHSYGNARP-RDKTKGRGTPRVPAPPSPP
        AV CGRGDKKT++GKRF  SYGNARP R+K   R   RV  P S P
Subjt:  AVYCGRGDKKTEKGKRFNHSYGNARP-RDKTKGRGTPRVPAPPSPP

P47910 30S ribosomal protein S31, chloroplastic5.0e-1548.11Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETL-GTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP
        MASL  G       S +     FSFS S+++ G SL +  T SL+ S S+  ++P +YCGRGD+KT KGKRFNHS+GNARP++K KGRG P+ P  P   
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETL-GTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPP

Query:  RKDKFD
           K D
Subjt:  RKDKFD

Arabidopsis top hitse value%identityAlignment
AT2G38140.1 plastid-specific ribosomal protein 48.7e-3162.81Show/hide
Query:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPPR
        MASL  G    V+ +  L     S S SET G SL +  T   ++STSS  SIP VYCGRGD+KT KGKRFNHS+GNARPR+K+KGRG  RVP PP+PPR
Subjt:  MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPPR

Query:  KDKFDDDEKIKIEIDESLFAN
        KDKF++DEKIKI+IDESLF+N
Subjt:  KDKFDDDEKIKIEIDESLFAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTCTTCCTTTCGGTCTTCTTCAGGCTGTATCTCAATCTCCAACTCTTTCTCCTCGTTTTTTCTCTTTCTCCAAATCTGAAACCCTAGGAACATCTCTGCGTGC
TTCTTCTACTGCTTCTCTTGCAATCTCTACTTCATCTCCTTTTTCAATTCCTGCTGTGTATTGTGGCAGAGGCGATAAGAAAACGGAGAAAGGAAAGCGGTTCAATCATT
CGTACGGAAATGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAGCTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACGATGAGAAAATC
AAGATCGAGATTGACGAGTCTCTTTTCGCTAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTCTTCCTTTCGGTCTTCTTCAGGCTGTATCTCAATCTCCAACTCTTTCTCCTCGTTTTTTCTCTTTCTCCAAATCTGAAACCCTAGGAACATCTCTGCGTGC
TTCTTCTACTGCTTCTCTTGCAATCTCTACTTCATCTCCTTTTTCAATTCCTGCTGTGTATTGTGGCAGAGGCGATAAGAAAACGGAGAAAGGAAAGCGGTTCAATCATT
CGTACGGAAATGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAGCTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACGATGAGAAAATC
AAGATCGAGATTGACGAGTCTCTTTTCGCTAACTAG
Protein sequenceShow/hide protein sequence
MASLPFGLLQAVSQSPTLSPRFFSFSKSETLGTSLRASSTASLAISTSSPFSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPAPPSPPRKDKFDDDEKI
KIEIDESLFAN