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HG10017304 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017304
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:12873967..12874392
RNA-Seq ExpressionHG10017304
SyntenyHG10017304
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A803P8L6 Uncharacterized protein6.3e-0428.21Show/hide
Query:  MVVRDELGGVVVARALCVFGGMAVEGAEAPASLKGLRLNEEMRLVAVWVKADTQVVVNKILAFNFSHSQHEIIYVEVFNLVCRLHILRLKYVPRDCNRAT
        MV+RD LG VVVA  + + G ++V  AE+ A   GL+L +   L  + + +D Q V + +   N S +   ++  +        +++   + PR CN+  
Subjt:  MVVRDELGGVVVARALCVFGGMAVEGAEAPASLKGLRLNEEMRLVAVWVKADTQVVVNKILAFNFSHSQHEIIYVEVFNLVCRLHILRLKYVPRDCNRAT

Query:  HCVVAHAVASNSSSCWT
        +C+ + A    +S  WT
Subjt:  HCVVAHAVASNSSSCWT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTAGAGATGAGTTGGGAGGAGTTGTTGTGGCTCGAGCCCTTTGCGTGTTCGGTGGTATGGCTGTGGAAGGGGCGGAAGCTCCTGCGTCGCTGAAAGGGTTGAG
GCTTAATGAAGAGATGAGGTTGGTGGCGGTGTGGGTGAAAGCTGACACTCAAGTAGTGGTCAACAAAATCCTGGCCTTTAATTTTTCTCACTCCCAACATGAAATTATTT
ATGTTGAAGTATTTAATCTTGTGTGTAGGCTTCATATTTTGCGCCTCAAATATGTTCCTAGAGATTGTAATAGGGCGACCCATTGTGTGGTAGCCCATGCTGTGGCTTCA
AACTCTTCTAGTTGCTGGACCTGTGATATTTCTAATTGGCTCAATCGGTTGATTGAGGTTGAGAAGGAGGTGATTGAGCCTTTACTTTCTCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTTAGAGATGAGTTGGGAGGAGTTGTTGTGGCTCGAGCCCTTTGCGTGTTCGGTGGTATGGCTGTGGAAGGGGCGGAAGCTCCTGCGTCGCTGAAAGGGTTGAG
GCTTAATGAAGAGATGAGGTTGGTGGCGGTGTGGGTGAAAGCTGACACTCAAGTAGTGGTCAACAAAATCCTGGCCTTTAATTTTTCTCACTCCCAACATGAAATTATTT
ATGTTGAAGTATTTAATCTTGTGTGTAGGCTTCATATTTTGCGCCTCAAATATGTTCCTAGAGATTGTAATAGGGCGACCCATTGTGTGGTAGCCCATGCTGTGGCTTCA
AACTCTTCTAGTTGCTGGACCTGTGATATTTCTAATTGGCTCAATCGGTTGATTGAGGTTGAGAAGGAGGTGATTGAGCCTTTACTTTCTCGCTAA
Protein sequenceShow/hide protein sequence
MVVRDELGGVVVARALCVFGGMAVEGAEAPASLKGLRLNEEMRLVAVWVKADTQVVVNKILAFNFSHSQHEIIYVEVFNLVCRLHILRLKYVPRDCNRATHCVVAHAVAS
NSSSCWTCDISNWLNRLIEVEKEVIEPLLSR