; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017385 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017385
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description50S ribosomal protein L33, chloroplastic
Genome locationChr03:13922557..13922796
RNA-Seq ExpressionHG10017385
SyntenyHG10017385
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR018264 - Ribosomal protein L33, conserved site
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJF46404.1 ribosomal protein L33 [Cucumis melo]5.0e-3798.73Show/hide
Query:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MEELRESKIQGRFMAKGKDARVTVILECT CVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

YP_004841804.1 ribosomal protein L33 [Cucumis melo subsp. melo]1.3e-2998.48Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECT CVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

YP_009387580.1 ribosomal protein L33 [Hansenia weberbaueriana]3.4e-3084.81Show/hide
Query:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MEEL +SKIQ  FMAKGKD R+TVILECT CVRNGVNK S GISRYIT+KNRHNTP+RLELRKFCP CYKHTIHGEIKK
Subjt:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

YP_009387665.1 ribosomal protein L33 [Hansenia forbesii]3.4e-3084.81Show/hide
Query:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MEEL +SKIQG FMAKGKD R+TVILECT CVRNGVNK S GISRYIT+KNRHNTP+RLELRKFCP CYKHTIH EIKK
Subjt:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

YP_009456167.1 ribosomal protein L33 [Lagenaria siceraria]1.5e-30100Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

TrEMBL top hitse value%identityAlignment
A0A1Y0B534 50S ribosomal protein L33, chloroplastic1.7e-3084.81Show/hide
Query:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MEEL +SKIQ  FMAKGKD R+TVILECT CVRNGVNK S GISRYIT+KNRHNTP+RLELRKFCP CYKHTIHGEIKK
Subjt:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

A0A1Y0B5C5 50S ribosomal protein L33, chloroplastic1.7e-3084.81Show/hide
Query:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MEEL +SKIQG FMAKGKD R+TVILECT CVRNGVNK S GISRYIT+KNRHNTP+RLELRKFCP CYKHTIH EIKK
Subjt:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

A0A6M3W1I6 50S ribosomal protein L33, chloroplastic2.4e-3798.73Show/hide
Query:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MEELRESKIQGRFMAKGKDARVTVILECT CVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

A0A7G9IT58 50S ribosomal protein L33, chloroplastic7.5e-31100Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

X2F867 50S ribosomal protein L33, chloroplastic7.5e-31100Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

SwissProt top hitse value%identityAlignment
A0ZZ56 50S ribosomal protein L33, chloroplastic2.3e-2989.39Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAK KD RVT+ILECT CVRNGVNKES GISRYITQKNRHNTPSRLEL+KFCP CYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

A6MM57 50S ribosomal protein L33, chloroplastic3.6e-3092.42Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKD RV VILECT CVRNGVNKES+GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

B1A956 50S ribosomal protein L33, chloroplastic7.2e-3193.94Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVT+ILECT CVRNGVNKES GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Q2QD68 50S ribosomal protein L33, chloroplastic3.8e-3296.97Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECT CVRNGVNK+SIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Q49KX8 50S ribosomal protein L33, chloroplastic2.3e-2989.39Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKD RVTVILECT+CVR G+NKES G+SRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Arabidopsis top hitse value%identityAlignment
ATCG00640.1 ribosomal protein L331.4e-2986.36Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKD RVT+ILECT CVRN + KE+ GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGTTGCGTGAATCAAAAATCCAAGGGAGGTTCATGGCCAAGGGTAAAGATGCCCGAGTAACAGTTATTTTGGAATGTACTCATTGTGTTCGAAACGGTGTTAA
TAAGGAATCAATCGGGATTTCCAGATATATTACTCAAAAGAATCGACACAATACGCCTAGTCGATTGGAATTGAGAAAATTCTGTCCCCGTTGTTACAAACATACGATTC
ATGGGGAGATAAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGTTGCGTGAATCAAAAATCCAAGGGAGGTTCATGGCCAAGGGTAAAGATGCCCGAGTAACAGTTATTTTGGAATGTACTCATTGTGTTCGAAACGGTGTTAA
TAAGGAATCAATCGGGATTTCCAGATATATTACTCAAAAGAATCGACACAATACGCCTAGTCGATTGGAATTGAGAAAATTCTGTCCCCGTTGTTACAAACATACGATTC
ATGGGGAGATAAAGAAATAG
Protein sequenceShow/hide protein sequence
MEELRESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK