; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017390 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017390
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationChr03:13956840..13959896
RNA-Seq ExpressionHG10017390
SyntenyHG10017390
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3622453.1 hypothetical protein FXO37_32330 [Capsicum annuum]3.3e-6769.48Show/hide
Query:  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVG
        LKKDLRVSRVGPGG LNAFFF LI VISQRLA VRKKGGTS LGERST ES  +        G +           KRIEE S+ F+ APL SGGY SVG
Subjt:  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVG

Query:  RAPLLQLGRCDYGNGEEDRNMPLKDSTETKMGCQERRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFS
        RA L          GEED+N+PLK S ETKMGCQE +GESVGG  GGGLPCGGCQRFESAYLQLVNLADTKLYD T FFRF  SIYDLSF+DVDKI PFS
Subjt:  RAPLLQLGRCDYGNGEEDRNMPLKDSTETKMGCQERRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFS

Query:  STLGWHSLKVKGE
        STLGWHSLK +G+
Subjt:  STLGWHSLKVKGE

KAF3622463.1 hypothetical protein FXO38_31271 [Capsicum annuum]6.2e-6669.01Show/hide
Query:  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVG
        LKKDLRVSRVGPGG LNAFFF LI VISQRLA VRKKGGTS LGERST ES  +        G +           KRIEE S+ F+ APL SGGY SVG
Subjt:  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVG

Query:  RAPLLQLGRCDYGNGEEDRNMPLKDSTETKMGCQERRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFS
        RA L          GEED+N+PLK S ETKMGCQE +GESVGG  GGGLP GGCQRFESAYLQLVNLADTKLYD T FFRF  SIYDLSF+DVDKI PFS
Subjt:  RAPLLQLGRCDYGNGEEDRNMPLKDSTETKMGCQERRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFS

Query:  STLGWHSLKVKGE
        STLGWHSLK +G+
Subjt:  STLGWHSLKVKGE

KAF7117209.1 hypothetical protein RHSIM_RhsimPtG0005300 [Rhododendron simsii]4.3e-7592.81Show/hide
Query:  RRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVS
        R G   G LRGGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFG SIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVS
Subjt:  RRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVS

Query:  DEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        DEMLRGVENK RSGDSRIGQPF+LLLNPWA KRQPGELKHLSSQRKRKQKRFP
Subjt:  DEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

KAG5222336.1 Vacuolar protein sorting-associated protein [Salix suchowensis]3.3e-7594.67Show/hide
Query:  ESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEM
        ESVGG RGGGLPCGGCQRFESAYLQLV+L  TKLYDST FFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEM
Subjt:  ESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEM

Query:  LRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        LRGVENKRRSGDSRIGQPFKLL NPWAGKRQPGELKHLS+QRKRKQKRFP
Subjt:  LRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

OVA05688.1 hypothetical protein BVC80_4285g1 [Macleaya cordata]5.1e-7662.13Show/hide
Query:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGN---------GEEDRNMPLK-------------------------------------------
        KRIEEASDSFM APLGSGGYSSVGRAPLLQL     G+         GEED+  P +                                           
Subjt:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGN---------GEEDRNMPLK-------------------------------------------

Query:  ---DSTETKMGCQ----------------ERRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGW
           DS E +   +                 R   S GGLRGGGLPCGGCQRFESAYLQLVNLADTK+YDST FFRFGSSIYDLSFMDVDKIL FSSTLGW
Subjt:  ---DSTETKMGCQ----------------ERRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGW

Query:  HSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS
        HSLKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLS
Subjt:  HSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS

TrEMBL top hitse value%identityAlignment
A0A200Q5G5 Uncharacterized protein ycf682.5e-7662.13Show/hide
Query:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGN---------GEEDRNMPLK-------------------------------------------
        KRIEEASDSFM APLGSGGYSSVGRAPLLQL     G+         GEED+  P +                                           
Subjt:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGN---------GEEDRNMPLK-------------------------------------------

Query:  ---DSTETKMGCQ----------------ERRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGW
           DS E +   +                 R   S GGLRGGGLPCGGCQRFESAYLQLVNLADTK+YDST FFRFGSSIYDLSFMDVDKIL FSSTLGW
Subjt:  ---DSTETKMGCQ----------------ERRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGW

Query:  HSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS
        HSLKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLS
Subjt:  HSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS

A0A2N9HUL9 Uncharacterized protein ycf686.9e-7998Show/hide
Query:  ESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEM
        ESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEM
Subjt:  ESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEM

Query:  LRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        LRGVENKRRSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRKRKQKRFP
Subjt:  LRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

A0A2N9I678 Uncharacterized protein ycf685.1e-05100Show/hide
Query:  MPRILLKERGAFGNADTGGAWLSSARA
        MPRILLKERGAFGNADTGGAWLSSARA
Subjt:  MPRILLKERGAFGNADTGGAWLSSARA

A0A2P2JY74 Uncharacterized protein ycf683.9e-7494.08Show/hide
Query:  ESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHS--LKVKGEVQTKKGLRWIPRHPETRKGVVSD
        ESVGG RGGGLP GGCQRFESAYLQLVNL  TKLYDST FFRFGSSIYDLSFMDVDKILPFSSTLGWHS  LKVKGEVQT+KGLRWIPRHPETRKGVVSD
Subjt:  ESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHS--LKVKGEVQTKKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP
        EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS+QRKRKQKRFP
Subjt:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP

A0A6N2MWA8 Uncharacterized protein ycf688.2e-7253.87Show/hide
Query:  ARGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSG
        A G G LKKDLRVS+VGPGG LNAFFFLLIGVIS+RLAMVRKK      GE++  ES       G      P  P       KRIEEASDSF+ APLGSG
Subjt:  ARGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSG

Query:  GYSSVGRAPLLQLGRCDY-------------GN--------------------------------------GEEDRNMPLKDSTETKMGCQERR------
               A L++L  C++             GN                                      GEED+   L+D  +   G Q  R      
Subjt:  GYSSVGRAPLLQLGRCDY-------------GN--------------------------------------GEEDRNMPLKDSTETKMGCQERR------

Query:  --------------------GESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTK
                            G    G RGGGLPCGGCQRFESAYLQLV+L  TKLYDST FFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQT+
Subjt:  --------------------GESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTK

Query:  KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRI
        KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRI
Subjt:  KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRI

A0A6N2MWA8 Uncharacterized protein ycf683.5e-1467.11Show/hide
Query:  MPRILLKERGAFGNADTGGAWLSSARALPTVEVGTLSRLPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPAR
        MPRILLKERGAFGNADTGGAWLSSARA       T    P      V+ +     PYALGDTRATMAGTKGRDPAR
Subjt:  MPRILLKERGAFGNADTGGAWLSSARALPTVEVGTLSRLPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPAR

A0A6N2MWA8 Uncharacterized protein ycf681.1e-6560.64Show/hide
Query:  VSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQ
        +S +G  G LNAFFFLLIGVISQRLAMVRKK G                 +TGE+          A  K++ + + +   +   +G            + 
Subjt:  VSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQ

Query:  LGRCDYGNGEEDRNMPLKDSTETKMGCQERRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWH
        L R  Y     D +  L       +       ESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYDLSFMDVDKILPFSSTLGWH
Subjt:  LGRCDYGNGEEDRNMPLKDSTETKMGCQERRGESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWH

Query:  SLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ
        SLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG+
Subjt:  SLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCTTGCCAACCGTTGAGGTTGGAACCCTGAG
CAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATC
CCGCGAGGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGA
CTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGG
ATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGC
TCTTGCAATTGGGTCGTTGCGATTACGGTAATGGGGAAGAGGACCGAAACATGCCACTGAAAGACTCTACTGAGACAAAGATGGGCTGTCAAGAACGTAGAGGAGAATCA
GTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCC
ATTTTTCCGATTCGGCAGTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGG
TTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGAT
TCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATT
CCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCTTGCCAACCGTTGAGGTTGGAACCCTGAG
CAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATC
CCGCGAGGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGA
CTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGG
ATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGC
TCTTGCAATTGGGTCGTTGCGATTACGGTAATGGGGAAGAGGACCGAAACATGCCACTGAAAGACTCTACTGAGACAAAGATGGGCTGTCAAGAACGTAGAGGAGAATCA
GTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCC
ATTTTTCCGATTCGGCAGTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGG
TTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGAT
TCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATT
CCCGTAG
Protein sequenceShow/hide protein sequence
MPRILLKERGAFGNADTGGAWLSSARALPTVEVGTLSRLPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQR
LAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGNGEEDRNMPLKDSTETKMGCQERRGES
VGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGD
SRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP