CuGenDBv2

Gene ID	HG10017406
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP synthase subunit b, chloroplastic
Genome location	Chr03:14022649..14024548
RNA-Seq Expression	HG10017406
Synteny	HG10017406
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009507 - chloroplast (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0008289 - lipid binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR038662 - F1F0 ATP synthase subunit C superfamily IPR035921 - F/V-ATP synthase subunit C superfamily IPR002379 - V-ATPase proteolipid subunit C-like domain IPR002146 - ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast IPR000454 - ATP synthase, F0 complex, subunit C

Homology

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GenBank top hits

e value

%identity

Alignment

EXB81182.1 ATP synthase subunit b [Morus notabilis]

1.2e-69

85.08

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
        MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR              EELR GA+EQLEKAR+RLRKVE EADQFRVNGYSEI
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI

Query:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN
        EREKLNLINSTSK+LEQLENYKNETI FEQQ+AIN+VRQ+VFQQAL+GALGTLNSCL+NELHLRTIS NIGMFGTMKEIT+
Subjt:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

KAF8376850.1 hypothetical protein HHK36_031434 [Tetracentron sinense]

4.2e-70

86.19

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
        MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR              EELRGGAIEQLEKAR RLRKVEMEAD+FRVNGYSEI
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI

Query:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN
        EREKLNLINST K+LEQLENYKNETI FEQQ+AINQVRQ+VFQQALQGALGTLNSCL++ELHLRTISANIGMFG MKEIT+
Subjt:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

KAG8363202.1 hypothetical protein BUALT_BualtPtG0001000 [Buddleja alternifolia]

2.5e-70

86.19

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
        MNPL+SAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR              EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI

Query:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN
        EREK NLINST K+LEQLENYKNETI+FEQQ+AINQVRQ+VFQQALQGALGTLNSCL+NELHLRTISANIGM G MKEIT+
Subjt:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

PHU30259.1 ATP synthase subunit b, chloroplastic [Capsicum chinense]

3.0e-68

83.98

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
        MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR              EELRGGAIEQLEKAR+RLRKVE EA+QFR+NGYSEI
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI

Query:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN
        EREKL LINST K+LEQLENYKNETI+FEQQ+AINQVRQ+VFQQAL+GALGTLNSCL+NELHLRTISANIGM GT+KEIT+
Subjt:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

VVA41865.1 PREDICTED: ATP [Prunus dulcis]

3.6e-69

85.08

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
        MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR              EELR GA++QLEKARARLRKVE EADQFRVNGYSEI
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI

Query:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN
        EREKLNLINST K+LEQLENYKNETI FEQQ+AINQVRQ+VFQQALQGALGTLNSCL+NELHLRTIS NIGMFGT+KEIT+
Subjt:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

TrEMBL top hits

e value

%identity

Alignment

A0A2G2WJK9 ATP synthase subunit b, chloroplastic

7.3e-68

83.43

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
        MNPLISAASVIA GL VGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR              EELRGGAIEQLEKAR+RLRKVE EA+QFRVNGYSEI
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI

Query:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN
        EREKL LINST K+LEQLENYKNETI+FEQQ+AINQVRQ+VFQQAL+GALGTLNSCL+NELHLRTISANIGM GT+KEIT+
Subjt:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

A0A2G3DGZ7 ATP synthase subunit b, chloroplastic

1.5e-68

83.98

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
        MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR              EELRGGAIEQLEKAR+RLRKVE EA+QFR+NGYSEI
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI

Query:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN
        EREKL LINST K+LEQLENYKNETI+FEQQ+AINQVRQ+VFQQAL+GALGTLNSCL+NELHLRTISANIGM GT+KEIT+
Subjt:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

A0A4S4DD61 ATP-synt_C domain-containing protein

1.4e-66

81.77

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
        MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR              EELR GAIEQLEKARARLRKVEMEAD++R+NGYSEI
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI

Query:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN
        +REK+NLIN+TS SLEQLENYKNET+ FEQQ+AINQVRQQVFQQALQGALG LNSCL++ELHLRTISANIG+ G M+EIT+
Subjt:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

A0A5E4GPK3 PREDICTED: ATP

1.7e-69

85.08

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
        MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR              EELR GA++QLEKARARLRKVE EADQFRVNGYSEI
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI

Query:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN
        EREKLNLINST K+LEQLENYKNETI FEQQ+AINQVRQ+VFQQALQGALGTLNSCL+NELHLRTIS NIGMFGT+KEIT+
Subjt:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

W9RM45 ATP synthase subunit b

5.9e-70

85.08

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI
        MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR              EELR GA+EQLEKAR+RLRKVE EADQFRVNGYSEI
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR--------------EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEI

Query:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN
        EREKLNLINSTSK+LEQLENYKNETI FEQQ+AIN+VRQ+VFQQAL+GALGTLNSCL+NELHLRTIS NIGMFGTMKEIT+
Subjt:  EREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

SwissProt top hits

e value

%identity

Alignment

A4GYP4 ATP synthase subunit b, chloroplastic

5.4e-52

93.16

Show/hide

Query:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR
        EELRGGAIEQLEKARARLRKVE+EADQFRVNGYSEIEREKLNLINST K+LEQLENYKNETI FEQQ+AINQVRQ+VFQQALQGALGTLNSCL NELHLR
Subjt:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR

Query:  TISANIGMFGTMKEITN
        TISANIGMFG MKEITN
Subjt:  TISANIGMFGTMKEITN

Q09G60 ATP synthase subunit b, chloroplastic

4.6e-51

91.45

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Query:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR
        EELRGGAIEQLEKARARLRKVEMEAD+FRVNGYSEIEREKLNLINST K+LE+LENYKNETI+FEQQ+AINQVRQ+VFQQALQ ALGTLNSCL+NELHLR
Subjt:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR

Query:  TISANIGMFGTMKEITN
        TISANIGMFGTMKEIT+
Subjt:  TISANIGMFGTMKEITN

Q14FH1 ATP synthase subunit b, chloroplastic

5.4e-52

93.16

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Query:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR
        EELRGGAIEQLEKARARLRKVE+EADQFRVNGYSEIEREKLNLINST K+LEQLENYKNETI FEQQ+AINQVRQ+VFQQALQGALGTLNSCL NELHLR
Subjt:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR

Query:  TISANIGMFGTMKEITN
        TISANIGMFG MKEITN
Subjt:  TISANIGMFGTMKEITN

Q49L12 ATP synthase subunit b, chloroplastic

3.5e-51

91.45

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Query:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR
        EELRGGAIEQLEKARARLRKVEMEA+QFRVNGYSEIE+EKLNLINST K+LEQLENYKNETI FEQQ+AINQVRQ+VFQQALQGALGTLNSCL+NELHLR
Subjt:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR

Query:  TISANIGMFGTMKEITN
        TISANIGMFG MKEIT+
Subjt:  TISANIGMFGTMKEITN

Q4VZP7 ATP synthase subunit b, chloroplastic

2.8e-56

100

Show/hide

Query:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR
        EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR
Subjt:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR

Query:  TISANIGMFGTMKEITN
        TISANIGMFGTMKEITN
Subjt:  TISANIGMFGTMKEITN

Arabidopsis top hits

e value

%identity

Alignment

ATCG00130.1 ATPase, F0 complex, subunit B/B', bacterial/chloroplast

4.8e-48

84.62

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Query:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR
        EELR GAI+QLE ARARLR VE EAD+FRVNGYSEIEREKLNLINST K+L+QLENYKNETI FEQQ+ INQVR++VFQQALQGA+GTLNSCL NELHLR
Subjt:  EELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNETIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLR

Query:  TISANIGMFGTMKEITN
        TI+ANIGMFGTMKEIT+
Subjt:  TISANIGMFGTMKEITN

ATCG00140.1 ATP synthase subunit C family protein

5.2e-18

94.34

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Query:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIREEL
        MNPL+SAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR  L
Subjt:  MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIREEL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAATCCACTGATTTCTGCCGCTTCCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGCGGGCCAAGCTGTAGA
AGGGATCGCAAGACAACCTGAGGCGGAGGGAAAAATCCGAGAAGAACTCCGTGGGGGGGCCATTGAACAGCTGGAAAAAGCCCGGGCCCGCTTACGAAAAGTCGAAATGG
AAGCGGATCAGTTTCGAGTGAATGGATACTCTGAGATAGAACGAGAAAAATTGAATTTGATTAATTCAACTTCTAAAAGTTTGGAACAATTAGAAAATTATAAAAATGAA
ACTATTCGTTTTGAACAACAAAAAGCGATTAATCAAGTACGACAACAGGTTTTCCAACAAGCCTTACAAGGAGCTCTAGGAACTCTTAATAGTTGTTTGGACAACGAGTT
ACATTTACGTACCATCAGTGCTAATATTGGCATGTTTGGGACGATGAAAGAAATAACTAACTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIREELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINSTSKSLEQLENYKNE
TIRFEQQKAINQVRQQVFQQALQGALGTLNSCLDNELHLRTISANIGMFGTMKEITN

HG10017406 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome