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HG10017422 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017422
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein TIC 214
Genome locationChr03:14122847..14123107
RNA-Seq ExpressionHG10017422
SyntenyHG10017422
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QDL00004.1 Ycf1 [Siraitia grosvenorii]3.4e-1597.87Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEESM EDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
QNM38590.1 hypothetical chloroplast RF19 [Lagenaria siceraria var. microcarpa]1.2e-15100Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
YP_009456205.1 Ycf1 [Lagenaria siceraria]1.2e-15100Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
YP_009674449.1 photosystem I assembly protein Ycf1 [Siraitia grosvenorii]3.4e-1597.87Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEESM EDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
YP_009738261.1 Ycf1 [Siraitia siamensis]3.4e-1597.87Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEESM EDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
TrEMBL top hitse value%identityAlignment
A0A2I6C0D0 Protein TIC 2145.7e-16100Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
A0A514YKY6 Protein TIC 2141.7e-1597.87Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEESM EDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
A0A515BLT2 Protein TIC 2141.7e-1597.87Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEESM EDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
A0A6C0U995 Protein TIC 2141.7e-1597.87Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEESM EDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
A0A7G9IT96 Protein TIC 2145.7e-16100Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
SwissProt top hitse value%identityAlignment
A0ZZ93 Protein TIC 2141.2e-1070.21Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEE++  +HEIRSRK+KRVVIFT+N   +DTYTNTKD  +PDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
A4GYX4 Protein TIC 2141.3e-0974.51Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLET--SDTYTN--TKDTNNPDQ
        QEGENEE+  EDHEIRSRKAKRVVIFTDN E   S+TY N  TKDT N DQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLET--SDTYTN--TKDTNNPDQ
A6MMG9 Protein TIC 2142.2e-0970.21Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QE E+EE   EDHEIRSRKAKRVVI+TDN E +DT T+TKDT N D+
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Q14FA0 Protein TIC 2141.3e-0974.51Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLET--SDTYTN--TKDTNNPDQ
        QEGENEE+  EDHEIRSRKAKRVVIFTDN E   S+TY N  TKDT N DQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLET--SDTYTN--TKDTNNPDQ
Q2L951 Protein TIC 2141.1e-1172.34Show/hide
Query:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        QEGENEE++  +HEIRSRK+KRVVIFT+N   +DTYTNTKD N+PDQ
Subjt:  QEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
Arabidopsis top hitse value%identityAlignment
ATCG01130.1 Ycf1 protein8.1e-0758.7Show/hide
Query:  EGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ
        EGENEE++  +  IRSRKAKRVV+FTD     + YTN KD  N DQ
Subjt:  EGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATACAAATTAATCGACGAGTTAGAACACAGGAAGGAGAAAACGAAGAAAGTATGGTGGAAGATCATGAAATTCGTTCAAGAAAAGCCAAACGTGTCGTAATTTT
TACTGATAATCTAGAAACTAGCGATACTTATACTAATACCAAAGATACTAATAATCCTGATCAACAGACGAGTTGCTTTGATACGGTATTCCCAACAATCGGATTTTCGT
CGAGACATAATCAAAGGCTCTATGCGTGCTCAACGACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATACAAATTAATCGACGAGTTAGAACACAGGAAGGAGAAAACGAAGAAAGTATGGTGGAAGATCATGAAATTCGTTCAAGAAAAGCCAAACGTGTCGTAATTTT
TACTGATAATCTAGAAACTAGCGATACTTATACTAATACCAAAGATACTAATAATCCTGATCAACAGACGAGTTGCTTTGATACGGTATTCCCAACAATCGGATTTTCGT
CGAGACATAATCAAAGGCTCTATGCGTGCTCAACGACGTAA
Protein sequenceShow/hide protein sequence
MVIQINRRVRTQEGENEESMVEDHEIRSRKAKRVVIFTDNLETSDTYTNTKDTNNPDQQTSCFDTVFPTIGFSSRHNQRLYACSTT