; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017440 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017440
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr03:14322524..14324014
RNA-Seq ExpressionHG10017440
SyntenyHG10017440
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08449.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]3.2e-0385.71Show/hide
Query:  AGKFGDAERWRRLMDSNNSSKIPGQSLV
        AGK+GDAERWRR MDS+N SKIPGQSLV
Subjt:  AGKFGDAERWRRLMDSNNSSKIPGQSLV

TYK08449.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]9.8e-10985.6Show/hide
Query:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL
        M  LWKGCKF SSQ+SS F+NLQ LSFSS LQIKS SPSAA S+SL  SP  LISQV +YATTHKA QQIRSFII SGLLLNATTNFILL NTLLHCYPL
Subjt:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL

Query:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR
        YQPLR+ P IPPSYDTFAYSFL HS ADLEL GPG QLHALT K+GFPSHVYVQTAILRMYA+SGFLL ALKVFDEMPDRSSVTWNVLITGLVKLGEL R
Subjt:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR

Query:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY
        AR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFWRMVAHY
Subjt:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY

XP_004147552.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus]3.2e-0385.71Show/hide
Query:  AGKFGDAERWRRLMDSNNSSKIPGQSLV
        AGK+GDAERWRRLMDS+  SKIPGQSLV
Subjt:  AGKFGDAERWRRLMDSNNSSKIPGQSLV

XP_016899586.1 PREDICTED: pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis melo]3.2e-0385.71Show/hide
Query:  AGKFGDAERWRRLMDSNNSSKIPGQSLV
        AGK+GDAERWRR MDS+N SKIPGQSLV
Subjt:  AGKFGDAERWRRLMDSNNSSKIPGQSLV

XP_016899586.1 PREDICTED: pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis melo]6.3e-10884.77Show/hide
Query:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL
        M SLWKGCKFFS ++SS  +NLQ LSFSS LQIKS+SPSAA S+ LR S   LISQVI+YATTHKATQQIRSFIITSGLLLNAT NFILL NTLLHCYPL
Subjt:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL

Query:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR
        YQPLR+ P IPPSYDTFAYSFLLHS ADLEL GPG QLHALT K+GFPSHVYVQTA+LRMYAASGFLL A+KVFDEMPDRSSVTWNVLITGLVK GEL R
Subjt:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR

Query:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY
        AR VFDQMPMR VVSWTAIIDGYTRLNRHEEAA LFWRMVAH+
Subjt:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY

XP_038882176.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 [Benincasa hispida]1.0e-11892.18Show/hide
Query:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL
        M+SLWKGCKF SSQT SAFENLQ LSFSSSL IKSISPSAA SNSLRRSPPLLISQVI+YATTHKATQ+IRSFIITSGLLLNATTNFILL NTLLHCYPL
Subjt:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL

Query:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR
        YQPLRR PHIPP+YDTFAYSFLLHS ADLELAGPGLQLH LTLK+GFPSHVYVQTAILRMYAASGFLL ALKVFDEMPDRSSVTWNVLITGLVKLGELGR
Subjt:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR

Query:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY
        ARAVFDQMP+RNVVSWTAIIDGYTRLNRHEEA  LFW MVAHY
Subjt:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY

XP_038882176.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 [Benincasa hispida]3.2e-0382.14Show/hide
Query:  AGKFGDAERWRRLMDSNNSSKIPGQSLV
        AGK+GDAE+WRRLMDS+N SKIPG+SLV
Subjt:  AGKFGDAERWRRLMDSNNSSKIPGQSLV

XP_038882176.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 [Benincasa hispida]1.0e-11892.18Show/hide
Query:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL
        M+SLWKGCKF SSQT SAFENLQ LSFSSSL IKSISPSAA SNSLRRSPPLLISQVI+YATTHKATQ+IRSFIITSGLLLNATTNFILL NTLLHCYPL
Subjt:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL

Query:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR
        YQPLRR PHIPP+YDTFAYSFLLHS ADLELAGPGLQLH LTLK+GFPSHVYVQTAILRMYAASGFLL ALKVFDEMPDRSSVTWNVLITGLVKLGELGR
Subjt:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR

Query:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY
        ARAVFDQMP+RNVVSWTAIIDGYTRLNRHEEA  LFW MVAHY
Subjt:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY

XP_038882179.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X2 [Benincasa hispida]7.0e-0639.18Show/hide
Query:  GLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADL------------FWRMV----AHYAGKFGDAERWRRLMDSNNSSKIPGQSLV
        GLVK G     + V +     +++ + ++ID   R  R EEA  +             WR +    + +AGK+GDAE+WRRLMDS+N SKIPG+SLV
Subjt:  GLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADL------------FWRMV----AHYAGKFGDAERWRRLMDSNNSSKIPGQSLV

XP_038882179.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X2 [Benincasa hispida]9.8e-10985.6Show/hide
Query:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL
        M  LWKGCKF SSQ+SS F+NLQ LSFSS LQIKS SPSAA S+SL  SP  LISQV +YATTHKA QQIRSFII SGLLLNATTNFILL NTLLHCYPL
Subjt:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL

Query:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR
        YQPLR+ P IPPSYDTFAYSFL HS ADLEL GPG QLHALT K+GFPSHVYVQTAILRMYA+SGFLL ALKVFDEMPDRSSVTWNVLITGLVKLGEL R
Subjt:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR

Query:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY
        AR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFWRMVAHY
Subjt:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY

TrEMBL top hitse value%identityAlignment
A0A0A0L1E8 Uncharacterized protein1.6e-0385.71Show/hide
Query:  AGKFGDAERWRRLMDSNNSSKIPGQSLV
        AGK+GDAERWRRLMDS+  SKIPGQSLV
Subjt:  AGKFGDAERWRRLMDSNNSSKIPGQSLV

A0A0A0L1E8 Uncharacterized protein5.8e-10783.95Show/hide
Query:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL
        MQSLWK  KF SSQT S F+NLQ           SISPSAA  +     PPLLISQ+I+YAT+HKATQQIRSFIITSGLL NAT NFILL NTLLHCYPL
Subjt:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL

Query:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR
        YQPLRRIPH PPSYDTFAYSFLLHS ADLEL GPGLQLHALTLKVGFPSHVYVQTAI+RMYAA GFLL ALKVFDEMPDR+SVTWNVLITGLVKLGELGR
Subjt:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR

Query:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY
        ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFW+MVAHY
Subjt:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY

A0A1S4DUC6 pentatricopeptide repeat-containing protein At1g09220, mitochondrial1.6e-0385.71Show/hide
Query:  AGKFGDAERWRRLMDSNNSSKIPGQSLV
        AGK+GDAERWRR MDS+N SKIPGQSLV
Subjt:  AGKFGDAERWRRLMDSNNSSKIPGQSLV

A0A1S4DUC6 pentatricopeptide repeat-containing protein At1g09220, mitochondrial3.1e-10884.77Show/hide
Query:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL
        M SLWKGCKFFS ++SS  +NLQ LSFSS LQIKS+SPSAA S+ LR S   LISQVI+YATTHKATQQIRSFIITSGLLLNAT NFILL NTLLHCYPL
Subjt:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL

Query:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR
        YQPLR+ P IPPSYDTFAYSFLLHS ADLEL GPG QLHALT K+GFPSHVYVQTA+LRMYAASGFLL A+KVFDEMPDRSSVTWNVLITGLVK GEL R
Subjt:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR

Query:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY
        AR VFDQMPMR VVSWTAIIDGYTRLNRHEEAA LFWRMVAH+
Subjt:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY

A0A5A7UYK1 Pentatricopeptide repeat-containing protein1.6e-0385.71Show/hide
Query:  AGKFGDAERWRRLMDSNNSSKIPGQSLV
        AGK+GDAERWRR MDS+N SKIPGQSLV
Subjt:  AGKFGDAERWRRLMDSNNSSKIPGQSLV

A0A5A7UYK1 Pentatricopeptide repeat-containing protein4.7e-10985.6Show/hide
Query:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL
        M  LWKGCKF SSQ+SS F+NLQ LSFSS LQIKS SPSAA S+SL  SP  LISQV +YATTHKA QQIRSFII SGLLLNATTNFILL NTLLHCYPL
Subjt:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL

Query:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR
        YQPLR+ P IPPSYDTFAYSFL HS ADLEL GPG QLHALT K+GFPSHVYVQTAILRMYA+SGFLL ALKVFDEMPDRSSVTWNVLITGLVKLGEL R
Subjt:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR

Query:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY
        AR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFWRMVAHY
Subjt:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY

A0A5D3CDM6 Pentatricopeptide repeat-containing protein4.7e-10985.6Show/hide
Query:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL
        M  LWKGCKF SSQ+SS F+NLQ LSFSS LQIKS SPSAA S+SL  SP  LISQV +YATTHKA QQIRSFII SGLLLNATTNFILL NTLLHCYPL
Subjt:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL

Query:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR
        YQPLR+ P IPPSYDTFAYSFL HS ADLEL GPG QLHALT K+GFPSHVYVQTAILRMYA+SGFLL ALKVFDEMPDRSSVTWNVLITGLVKLGEL R
Subjt:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR

Query:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY
        AR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFWRMVAHY
Subjt:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY

A0A5D3CDM6 Pentatricopeptide repeat-containing protein1.6e-0385.71Show/hide
Query:  AGKFGDAERWRRLMDSNNSSKIPGQSLV
        AGK+GDAERWRR MDS+N SKIPGQSLV
Subjt:  AGKFGDAERWRRLMDSNNSSKIPGQSLV

A0A5D3CDM6 Pentatricopeptide repeat-containing protein4.7e-10985.6Show/hide
Query:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL
        M  LWKGCKF SSQ+SS F+NLQ LSFSS LQIKS SPSAA S+SL  SP  LISQV +YATTHKA QQIRSFII SGLLLNATTNFILL NTLLHCYPL
Subjt:  MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPL

Query:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR
        YQPLR+ P IPPSYDTFAYSFL HS ADLEL GPG QLHALT K+GFPSHVYVQTAILRMYA+SGFLL ALKVFDEMPDRSSVTWNVLITGLVKLGEL R
Subjt:  YQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR

Query:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY
        AR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFWRMVAHY
Subjt:  ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHY

A0A6J1IS71 pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like1.6e-0382.14Show/hide
Query:  AGKFGDAERWRRLMDSNNSSKIPGQSLV
        AGK+GDAE+WRRLMDS+ SSKIPGQSL+
Subjt:  AGKFGDAERWRRLMDSNNSSKIPGQSLV

SwissProt top hitse value%identityAlignment
Q38959 Pentatricopeptide repeat-containing protein At3g26630, chloroplastic1.6e-2141.27Show/hide
Query:  YDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNV
        +D F + F++ +         G Q+H L +K GF + V+ Q  ++ +Y   G      KVFD+MP RS V+W  ++ GLV   +L  A  VF+QMPMRNV
Subjt:  YDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNV

Query:  VSWTAIIDGYTRLNRHEEAADLFWRM
        VSWTA+I  Y +  R +EA  LF RM
Subjt:  VSWTAIIDGYTRLNRHEEAADLFWRM

Q680Z7 Pentatricopeptide repeat-containing protein At1g09220, mitochondrial5.5e-3844.61Show/hide
Query:  RYATTHKATQQIRSFIITSGLLL---NATTNFILLFNTLLHCYP----------LYQPLRRIPHIP------PSYDTFAYSFLLHSSADLELAG--PGLQ
        +Y +  K   Q+ S   TSG LL      +  + LFN LL CY           LY  L+R+  +       P +D+F Y FLL +S++        G+ 
Subjt:  RYATTHKATQQIRSFIITSGLLL---NATTNFILLFNTLLHCYP----------LYQPLRRIPHIP------PSYDTFAYSFLLHSSADLELAG--PGLQ

Query:  LHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFW
        LH LTLK+GF SHVYVQTA++ MY   G ++ A KVFDEMP+R+ VTWNV+ITGL  LG+  +A    ++MP R VVSWT IIDGY R+++ +EA  LF 
Subjt:  LHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFW

Query:  RMVA
        RMVA
Subjt:  RMVA

Q9FG16 Pentatricopeptide repeat-containing protein At5g065408.0e-2136.89Show/hide
Query:  DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVV
        D   + FL+ +S+++E    G Q H+  ++ GF + VYV+ +++ MYA  GF+  A ++F +M  R  V+W  ++ G  K G +  AR +FD+MP RN+ 
Subjt:  DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVV

Query:  SWTAIIDGYTRLNRHEEAADLF
        +W+ +I+GY + N  E+A DLF
Subjt:  SWTAIIDGYTRLNRHEEAADLF

Q9FLS9 Pentatricopeptide repeat-containing protein At5g618009.4e-2234.23Show/hide
Query:  IKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPL----------RRIPHIPPSYDTFAYSF-
        I SISPSA+ S            +V+ YAT+      +  FI         T      FNT++    L++P            R   +PP + TF + F 
Subjt:  IKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPL----------RRIPHIPPSYDTFAYSF-

Query:  --LLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAI
              + DL L      LH   L+ G  S ++    ++R+Y+    +  AL++FDE P R  VT+NVLI GLVK  E+ RAR +FD MP+R++VSW ++
Subjt:  --LLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAI

Query:  IDGYTRLNRHEEAADLFWRMVA
        I GY ++N   EA  LF  MVA
Subjt:  IDGYTRLNRHEEAADLFWRMVA

Q9LS72 Pentatricopeptide repeat-containing protein At3g292304.0e-2034.62Show/hide
Query:  DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFL--LHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRN
        D F Y FLL + +          +H    K+G  S +YV  A++  Y+  G L    A+K+F++M +R +V+WN ++ GLVK GEL  AR +FD+MP R+
Subjt:  DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFL--LHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRN

Query:  VVSWTAIIDGYTRLNRHEEAADLF----------WRMVAHYAGKFGDAERWRRLMD
        ++SW  ++DGY R     +A +LF          W  +     K GD E  R + D
Subjt:  VVSWTAIIDGYTRLNRHEEAADLF----------WRMVAHYAGKFGDAERWRRLMD

Arabidopsis top hitse value%identityAlignment
AT1G09220.1 Pentatricopeptide repeat (PPR) superfamily protein3.9e-3944.61Show/hide
Query:  RYATTHKATQQIRSFIITSGLLL---NATTNFILLFNTLLHCYP----------LYQPLRRIPHIP------PSYDTFAYSFLLHSSADLELAG--PGLQ
        +Y +  K   Q+ S   TSG LL      +  + LFN LL CY           LY  L+R+  +       P +D+F Y FLL +S++        G+ 
Subjt:  RYATTHKATQQIRSFIITSGLLL---NATTNFILLFNTLLHCYP----------LYQPLRRIPHIP------PSYDTFAYSFLLHSSADLELAG--PGLQ

Query:  LHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFW
        LH LTLK+GF SHVYVQTA++ MY   G ++ A KVFDEMP+R+ VTWNV+ITGL  LG+  +A    ++MP R VVSWT IIDGY R+++ +EA  LF 
Subjt:  LHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFW

Query:  RMVA
        RMVA
Subjt:  RMVA

AT3G26630.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-2241.27Show/hide
Query:  YDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNV
        +D F + F++ +         G Q+H L +K GF + V+ Q  ++ +Y   G      KVFD+MP RS V+W  ++ GLV   +L  A  VF+QMPMRNV
Subjt:  YDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNV

Query:  VSWTAIIDGYTRLNRHEEAADLFWRM
        VSWTA+I  Y +  R +EA  LF RM
Subjt:  VSWTAIIDGYTRLNRHEEAADLFWRM

AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.8e-2134.62Show/hide
Query:  DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFL--LHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRN
        D F Y FLL + +          +H    K+G  S +YV  A++  Y+  G L    A+K+F++M +R +V+WN ++ GLVK GEL  AR +FD+MP R+
Subjt:  DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFL--LHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRN

Query:  VVSWTAIIDGYTRLNRHEEAADLF----------WRMVAHYAGKFGDAERWRRLMD
        ++SW  ++DGY R     +A +LF          W  +     K GD E  R + D
Subjt:  VVSWTAIIDGYTRLNRHEEAADLF----------WRMVAHYAGKFGDAERWRRLMD

AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein5.7e-2236.89Show/hide
Query:  DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVV
        D   + FL+ +S+++E    G Q H+  ++ GF + VYV+ +++ MYA  GF+  A ++F +M  R  V+W  ++ G  K G +  AR +FD+MP RN+ 
Subjt:  DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVV

Query:  SWTAIIDGYTRLNRHEEAADLF
        +W+ +I+GY + N  E+A DLF
Subjt:  SWTAIIDGYTRLNRHEEAADLF

AT5G61800.1 Pentatricopeptide repeat (PPR) superfamily protein6.7e-2334.23Show/hide
Query:  IKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPL----------RRIPHIPPSYDTFAYSF-
        I SISPSA+ S            +V+ YAT+      +  FI         T      FNT++    L++P            R   +PP + TF + F 
Subjt:  IKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPL----------RRIPHIPPSYDTFAYSF-

Query:  --LLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAI
              + DL L      LH   L+ G  S ++    ++R+Y+    +  AL++FDE P R  VT+NVLI GLVK  E+ RAR +FD MP+R++VSW ++
Subjt:  --LLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAI

Query:  IDGYTRLNRHEEAADLFWRMVA
        I GY ++N   EA  LF  MVA
Subjt:  IDGYTRLNRHEEAADLFWRMVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGCTTATGGAAGGGATGCAAGTTCTTCTCCTCTCAAACTTCCTCTGCGTTTGAAAATCTTCAATCCCTTTCATTCTCTTCATCTCTTCAAATCAAATCAATCTC
TCCCTCCGCCGCCACATCCAATTCTCTCCGCCGCTCTCCGCCGCTCTTAATCTCTCAGGTAATTAGATACGCCACAACCCACAAAGCCACCCAACAAATTCGCTCTTTCA
TCATCACTTCCGGCTTACTTCTCAACGCCACCACCAATTTCATTCTTCTCTTCAATACATTGCTCCATTGTTACCCTCTCTACCAACCCCTTCGCCGCATTCCTCATATT
CCCCCTTCCTACGACACTTTCGCCTATTCCTTCCTCCTCCATTCTTCCGCCGATTTGGAGCTCGCCGGACCTGGGCTTCAACTCCACGCTCTCACTCTCAAGGTAGGCTT
TCCTTCCCATGTTTATGTTCAAACTGCAATTCTACGTATGTACGCCGCTTCTGGGTTTTTGCTTCATGCTCTGAAGGTGTTCGATGAAATGCCTGACCGAAGCTCTGTCA
CTTGGAATGTGTTGATTACTGGTTTGGTTAAGTTGGGTGAGCTTGGACGGGCTCGTGCTGTTTTTGATCAGATGCCGATGCGGAATGTTGTGTCTTGGACTGCTATAATC
GATGGGTATACTCGTTTAAATAGGCATGAGGAAGCTGCGGATTTGTTTTGGAGAATGGTGGCTCATTATGCTGGAAAATTTGGAGATGCAGAGAGATGGAGAAGATTGAT
GGATTCTAACAATTCCTCCAAAATTCCAGGACAGAGCCTTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGCTTATGGAAGGGATGCAAGTTCTTCTCCTCTCAAACTTCCTCTGCGTTTGAAAATCTTCAATCCCTTTCATTCTCTTCATCTCTTCAAATCAAATCAATCTC
TCCCTCCGCCGCCACATCCAATTCTCTCCGCCGCTCTCCGCCGCTCTTAATCTCTCAGGTAATTAGATACGCCACAACCCACAAAGCCACCCAACAAATTCGCTCTTTCA
TCATCACTTCCGGCTTACTTCTCAACGCCACCACCAATTTCATTCTTCTCTTCAATACATTGCTCCATTGTTACCCTCTCTACCAACCCCTTCGCCGCATTCCTCATATT
CCCCCTTCCTACGACACTTTCGCCTATTCCTTCCTCCTCCATTCTTCCGCCGATTTGGAGCTCGCCGGACCTGGGCTTCAACTCCACGCTCTCACTCTCAAGGTAGGCTT
TCCTTCCCATGTTTATGTTCAAACTGCAATTCTACGTATGTACGCCGCTTCTGGGTTTTTGCTTCATGCTCTGAAGGTGTTCGATGAAATGCCTGACCGAAGCTCTGTCA
CTTGGAATGTGTTGATTACTGGTTTGGTTAAGTTGGGTGAGCTTGGACGGGCTCGTGCTGTTTTTGATCAGATGCCGATGCGGAATGTTGTGTCTTGGACTGCTATAATC
GATGGGTATACTCGTTTAAATAGGCATGAGGAAGCTGCGGATTTGTTTTGGAGAATGGTGGCTCATTATGCTGGAAAATTTGGAGATGCAGAGAGATGGAGAAGATTGAT
GGATTCTAACAATTCCTCCAAAATTCCAGGACAGAGCCTTGTCTAA
Protein sequenceShow/hide protein sequence
MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHI
PPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAII
DGYTRLNRHEEAADLFWRMVAHYAGKFGDAERWRRLMDSNNSSKIPGQSLV