; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017460 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017460
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSuperoxide dismutase [Cu-Zn]
Genome locationChr03:14488892..14490759
RNA-Seq ExpressionHG10017460
SyntenyHG10017460
Gene Ontology termsGO:0019430 - removal of superoxide radicals (biological process)
GO:0004784 - superoxide dismutase activity (molecular function)
GO:0005507 - copper ion binding (molecular function)
InterPro domainsIPR001424 - Superoxide dismutase, copper/zinc binding domain
IPR024134 - Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone
IPR036423 - Superoxide dismutase-like, copper/zinc binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
APO14278.1 superoxide dismutase 2 [Luffa aegyptiaca]5.7e-5072.48Show/hide
Query:  MGALKAVALITGGDSNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVS
        MGALKAV LITGGDSNIKGSIQFVQDSN                                  GPHFNPLKKDHG PGD ERH GDLGNI AGPDGVAE+S
Subjt:  MGALKAVALITGGDSNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVS

Query:  ITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        ITDRL+SLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
Subjt:  ITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

KAG6595499.1 Superoxide dismutase [Cu-Zn] 2, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4870.67Show/hide
Query:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV
        MGALKAVALITGGD SN+KGSIQFVQDSN                                  GPHFNPLKK+HG PGD+ERH GDLGNI AGPDG+AEV
Subjt:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV

Query:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        SITDRL+SLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGAR+GCG
Subjt:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

XP_004147539.1 superoxide dismutase [Cu-Zn] 2 [Cucumis sativus]2.4e-4868.46Show/hide
Query:  MGALKAVALITGGDSNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVS
        MGALKAV LI GGDSN++G+IQFVQDSN                                  GPHFNPLKKDHG PGD+ERHVGDLGNI AGPDGVAEVS
Subjt:  MGALKAVALITGGDSNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVS

Query:  ITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        I+DRL+SLKGPHS++GRAVVVHADPDDLGKGGHELSKTTGNAGAR+GCG
Subjt:  ITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

XP_022925004.1 superoxide dismutase [Cu-Zn] 2-like isoform X1 [Cucurbita moschata]1.8e-4871.33Show/hide
Query:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV
        MGALKAVALITGGD SN+KGSIQFVQDSN                                  GPHFNPLKK+HG PGD+ERH GDLGNI AGPDGVAEV
Subjt:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV

Query:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        SITDRL+SLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGAR+GCG
Subjt:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

XP_023518071.1 superoxide dismutase [Cu-Zn] 2-like [Cucurbita pepo subsp. pepo]1.8e-4871.33Show/hide
Query:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV
        MGALKAVALITGGD SN+KGSIQFVQDSN                                  GPHFNPLKK+HG PGD+ERH GDLGNI AGPDGVAEV
Subjt:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV

Query:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        SITDRL+SLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGAR+GCG
Subjt:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

TrEMBL top hitse value%identityAlignment
A0A0A0KZZ1 Superoxide dismutase [Cu-Zn]1.2e-4868.46Show/hide
Query:  MGALKAVALITGGDSNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVS
        MGALKAV LI GGDSN++G+IQFVQDSN                                  GPHFNPLKKDHG PGD+ERHVGDLGNI AGPDGVAEVS
Subjt:  MGALKAVALITGGDSNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVS

Query:  ITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        I+DRL+SLKGPHS++GRAVVVHADPDDLGKGGHELSKTTGNAGAR+GCG
Subjt:  ITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

A0A1L5JHV2 Superoxide dismutase [Cu-Zn]2.8e-5072.48Show/hide
Query:  MGALKAVALITGGDSNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVS
        MGALKAV LITGGDSNIKGSIQFVQDSN                                  GPHFNPLKKDHG PGD ERH GDLGNI AGPDGVAE+S
Subjt:  MGALKAVALITGGDSNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVS

Query:  ITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        ITDRL+SLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
Subjt:  ITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

A0A6J1EAV2 Superoxide dismutase [Cu-Zn]8.9e-4971.33Show/hide
Query:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV
        MGALKAVALITGGD SN+KGSIQFVQDSN                                  GPHFNPLKK+HG PGD+ERH GDLGNI AGPDGVAEV
Subjt:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV

Query:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        SITDRL+SLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGAR+GCG
Subjt:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

A0A6J1EGN7 Superoxide dismutase2.0e-4871.14Show/hide
Query:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV
        MGALKAVALITGGD SN+KGSIQFVQDSN                                  GPHFNPLKK+HG PGD+ERH GDLGNI AGPDGVAEV
Subjt:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV

Query:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGC
        SITDRL+SLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGAR+GC
Subjt:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGC

A0A6J1HRQ3 Superoxide dismutase [Cu-Zn]2.6e-4870.67Show/hide
Query:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV
        MGALKAVALITGGD SN+KGSIQFVQDSN                                  GPHFNPLKK+HG PGD+ERH GDLGNI  GPDGVAEV
Subjt:  MGALKAVALITGGD-SNIKGSIQFVQDSN----------------------------------GPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEV

Query:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        SITDRL+SLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGAR+GCG
Subjt:  SITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

SwissProt top hitse value%identityAlignment
O49044 Superoxide dismutase [Cu-Zn] 23.0e-3857.05Show/hide
Query:  MGALKAVALITGGDSNIKGSIQFVQD----------------------------------SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVS
        MG +KAVA+I  G++N+KGS+QF+QD                                  S GPHFNPLKKDHG P D ERH GDLGN+ AG DGVAEVS
Subjt:  MGALKAVALITGGDSNIKGSIQFVQD----------------------------------SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVS

Query:  ITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        + D  + L G HSILGRAVVVHAD DDLG+ GHELSKTTGNAGARV CG
Subjt:  ITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

P11428 Superoxide dismutase [Cu-Zn] 21.7e-3373.03Show/hide
Query:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        S GPHFNP+ K+HG P D +RH GDLGN+ AG DGV  V+ITD  + L GPHSI+GRAVVVHADPDDLGKGGHELSK+TGNAG RV CG
Subjt:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

P24669 Superoxide dismutase [Cu-Zn]1.5e-3271.91Show/hide
Query:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        S GPHFNPL K+HG P D  RH GDLGN+  G DG  E SITD  + L GPHSI+GRAVVVHADPDDLGKGGHELSK+TGNAG R+ CG
Subjt:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

P28757 Superoxide dismutase [Cu-Zn] 21.5e-3273.03Show/hide
Query:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        S GPHFNP  K+HG P D  RH GDLGNI AG DGVA V+++D  + L G HSI+GRAVVVHADPDDLGKGGHELSKTTGNAG RV CG
Subjt:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

Q8L5E0 Superoxide dismutase [Cu-Zn] 21.1e-3269.66Show/hide
Query:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        S GPHFNP+ K+HG PGD  RH GDLGNI  G DG A ++I D+ + L GPHSI+GRAVVVH+DPDDLG+GGHELSK+TGNAG RV CG
Subjt:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

Arabidopsis top hitse value%identityAlignment
AT1G08830.1 copper/zinc superoxide dismutase 16.3e-3170.79Show/hide
Query:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        S GPHFNP  K HG P DA RH GDLGNI  G DG A  +ITD  + L GP+SI+GRAVVVHADPDDLGKGGHELS  TGNAG RV CG
Subjt:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

AT1G08830.2 copper/zinc superoxide dismutase 16.3e-3170.79Show/hide
Query:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        S GPHFNP  K HG P DA RH GDLGNI  G DG A  +ITD  + L GP+SI+GRAVVVHADPDDLGKGGHELS  TGNAG RV CG
Subjt:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

AT2G28190.1 copper/zinc superoxide dismutase 25.5e-2764.04Show/hide
Query:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        S GPHFNP    HG P D  RH GDLGNI A  DGVAE +I D  + L GP+S++GRA VVH   DDLGKGGHELS TTGNAG R+ CG
Subjt:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

AT5G18100.1 copper/zinc superoxide dismutase 36.7e-3371.91Show/hide
Query:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG
        S GPHFNPL + HG P + ERH GDLGNI AG +GVAE+ I D+ + L G +SILGRAVVVHADPDDLGKGGH+LSK+TGNAG+RVGCG
Subjt:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCG

AT5G18100.2 copper/zinc superoxide dismutase 32.8e-2369.01Show/hide
Query:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKG
        S GPHFNPL + HG P + ERH GDLGNI AG +GVAE+ I D+ + L G +SILGRAVVVHADPDDLGKG
Subjt:  SNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCTCTGAAAGCTGTGGCGCTCATCACAGGAGGAGATTCCAACATCAAAGGCTCCATCCAGTTCGTCCAAGATTCAAATGGGCCTCATTTTAATCCGTTGAAGAA
AGACCATGGAGGTCCTGGGGATGCAGAACGTCACGTAGGGGATTTGGGGAATATCTGTGCAGGTCCAGATGGGGTTGCTGAAGTTTCCATTACAGATAGGCTGGTTTCAC
TTAAGGGACCTCATTCAATACTAGGTCGGGCAGTCGTTGTGCATGCTGATCCTGATGATCTTGGCAAAGGTGGGCATGAACTTAGCAAGACGACTGGAAATGCCGGTGCA
AGAGTAGGATGTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCTCTGAAAGCTGTGGCGCTCATCACAGGAGGAGATTCCAACATCAAAGGCTCCATCCAGTTCGTCCAAGATTCAAATGGGCCTCATTTTAATCCGTTGAAGAA
AGACCATGGAGGTCCTGGGGATGCAGAACGTCACGTAGGGGATTTGGGGAATATCTGTGCAGGTCCAGATGGGGTTGCTGAAGTTTCCATTACAGATAGGCTGGTTTCAC
TTAAGGGACCTCATTCAATACTAGGTCGGGCAGTCGTTGTGCATGCTGATCCTGATGATCTTGGCAAAGGTGGGCATGAACTTAGCAAGACGACTGGAAATGCCGGTGCA
AGAGTAGGATGTGGTTAG
Protein sequenceShow/hide protein sequence
MGALKAVALITGGDSNIKGSIQFVQDSNGPHFNPLKKDHGGPGDAERHVGDLGNICAGPDGVAEVSITDRLVSLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGA
RVGCG