; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017466 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017466
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationChr03:14536591..14542124
RNA-Seq ExpressionHG10017466
SyntenyHG10017466
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]1.3e-13295.52Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
        NN PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+VVNEKVKSVDQ LHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA
        AAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKEP VVA
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]1.3e-13295.52Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
        NN PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+VVNEKVKSVDQ LHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA
        AAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKEP VVA
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

XP_008462804.1 PREDICTED: binding partner of ACD11 1-like [Cucumis melo]2.4e-13194.78Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
        NN PS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+VVNEKVKSVDQ LHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA
        AAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKEP VVA
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

XP_038881170.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]1.2e-13091.23Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL-----------------SGATIVDQIVSISPAENHVPRRE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL                 SGATIVDQIVSIS AENHVPRRE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL-----------------SGATIVDQIVSISPAENHVPRRE

Query:  MQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVN
        MQEVRVVDNAACLTPTENNFPS EDSASQPSSGKMYVNRAQ VVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+VVN
Subjt:  MQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVN

Query:  EKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA
        EKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVK+SKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE SVVA
Subjt:  EKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]6.7e-13497.01Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSIS AENHVPRREMQEVRVVDNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
        NNFPS EDSASQPSSGKMYVNRAQ VVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+VVNEKVKSVDQNLHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA
        AAIFAAERKLNDTGSAVK+SKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE SVVA
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein6.1e-13395.52Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
        NN PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+VVNEKVKSVDQ LHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA
        AAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKEP VVA
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

A0A1S3CIA3 binding partner of ACD11 1-like1.1e-13194.78Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
        NN PS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+VVNEKVKSVDQ LHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA
        AAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKEP VVA
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

A0A5D3BPG7 Binding partner of ACD11 1-like1.1e-13194.78Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
        NN PS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+VVNEKVKSVDQ LHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA
        AAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKEP VVA
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

A0A6J1DJX5 binding partner of ACD11 11.6e-12893.28Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        +TRTVQV HVSDLATEREIHEFFSFSGEIEHIEIQCE GQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVP+RE+QEVRVVDNAACLT TE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
        NN PS EDSASQPS G+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHRLTASAS KVLSFDRRVGLTEKLTVGI+VVNEKVKSVDQ LHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA
        AAIFAAERKLNDTGSAVK+SKYVTA AAWLNGAFGKVAKAGQAAG+KTREKFHLAMSNLTSKEP VVA
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

A0A6J1IKN1 binding partner of ACD11 14.5e-12892.16Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAEN+VPRREMQEVR VDNAA LTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
        NNFPSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTVGI+VVNEKVKSVDQ LHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA
        AAIFAAERK+NDTGSAVK+SKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK   V A
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.8e-0421.37Show/hide
Query:  VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFP
        V V ++S   TE++I +FFSF G++ +I  + + G+++TA + F  P A + ALLL  A +    + I+                 ++    + T+    
Subjt:  VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFP

Query:  SIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTMAAIF
          + +A Q    +        +++ +L++G  +    + K+   D+ + +++             G+ E    G+  VNE+    ++   V +K     F
Subjt:  SIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTMAAIF

Query:  AAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKF
        A   KLN T S V +  +     A           AG +AG K +  +
Subjt:  AAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKF

Q9LFD5 Binding partner of ACD11 11.1e-4642.63Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        Q R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                    
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
           P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G ++VNEK+K+VDQN  V+++T 
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.0e-5245.31Show/hide
Query:  MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPT
        M   TV+V +VS  AT+R++ EFFSFSG+I ++E Q E  ++K A+VTF+D +  E A+LLSGATIVD  V +S A ++    E          A L P 
Subjt:  MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPT

Query:  ENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKT
               +DS   P +G   + +A++VV+++LAKG  +G+DA+ KAK+ DEKH+LT++ASAKV SFD+++G T+K+  G  VV EKV+ VDQ   VS+KT
Subjt:  ENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKT

Query:  MAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA
         +AI AAE+ +++ GSA+  ++YV   A W+ GAF KVAKA +  G K +EK  +A
Subjt:  MAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA

AT5G16840.1 binding partner of acd11 17.8e-4842.63Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        Q R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                    
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
           P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G ++VNEK+K+VDQN  V+++T 
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 16.0e-4843.03Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        Q R+V+V ++S  ATE +I EFFSFSGE+E I+IQ     S  A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                    
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM
           P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G ++VNEK+K+VDQN  V+++T 
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  AAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein3.7e-9872.45Show/hide
Query:  TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTEN
        TR+VQV +VSDLATEREIHEFFSFSG+IEHIEIQ E GQS+ AFVTF DPKALEIALLLSGATIVDQIV+I+ AEN+V RRE QEVR++DNA  L   E+
Subjt:  TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTEN

Query:  NFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTMA
           + +   +   + + YV++AQ+VVATVLAKGSA+GQDA+NKAKAFDEKH+L A+ASAKV SFD+RVGLTEKL+VGI+ VNEKVKSVDQ L VSDKTMA
Subjt:  NFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTMA

Query:  AIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSV
        AIFAAERKLNDTGSAVKSS+YVTA AAW +GAF KVA+ GQ AG+KT+EKF+LA+SN++SK+  +
Subjt:  AIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSV

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-4941.42Show/hide
Query:  MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPRREMQEVRVVDNAACLTP
        M   TV+V +VS  ATER++ EFFSFSG+I ++E Q E   SK A+VTF+D +  E A+LL+G+TIVD  V+++ + ++ +P   +  +  +  +     
Subjt:  MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPRREMQEVRVVDNAACLTP

Query:  TENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDK
         +++ P+ ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++ASA+V SFD+R+G TEK+  G TVV+EKVK VDQ   V++K
Subjt:  TENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDK

Query:  TMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSV
        T +AI AAE+ +++ GSA+  ++YV   A W+ GAF +V+KA +  G K +EK  LA      K+  V
Subjt:  TMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAACACATTGAGATTCAATG
TGAACAGGGGCAATCCAAGACTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGAGCATAT
CTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTAGCATTGAGGATTCT
GCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACAGTACTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAA
AGCATTCGACGAAAAACATCGGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATAACAGTGGTTA
ACGAGAAAGTCAAGTCTGTAGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAATCA
AGCAAGTACGTGACAGCAAGTGCTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGGACAAAAACCAGAGAGAAGTTCCATTTGGCTAT
GTCAAACTTAACTTCCAAGGAACCCTCAGTTGTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAACACATTGAGATTCAATG
TGAACAGGGGCAATCCAAGACTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGAGCATAT
CTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTAGCATTGAGGATTCT
GCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACAGTACTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAA
AGCATTCGACGAAAAACATCGGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATAACAGTGGTTA
ACGAGAAAGTCAAGTCTGTAGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAATCA
AGCAAGTACGTGACAGCAAGTGCTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGGACAAAAACCAGAGAGAAGTTCCATTTGGCTAT
GTCAAACTTAACTTCCAAGGAACCCTCAGTTGTTGCCTAA
Protein sequenceShow/hide protein sequence
MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDS
ASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKS
SKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA