CuGenDBv2

Gene ID	HG10017476
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	damaged DNA binding;exodeoxyribonuclease IIIs
Genome location	Chr03:14656852..14659590
RNA-Seq Expression	HG10017476
Synteny	HG10017476
Gene Ontology terms	GO:0000077 - DNA damage checkpoint (biological process) GO:0006281 - DNA repair (biological process) GO:0030896 - checkpoint clamp complex (cellular component)
InterPro domains	IPR003021 - Rad1/Rec1/Rad17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004149108.1 uncharacterized protein LOC101219270 [Cucumis sativus]

1.7e-162

94.68

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDL+CH DNVQGLVDAFT+VRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQP PPSVTFK EGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
        FMYYANTDLLISFHCD+QVSYRYKYKFLRATTSNIP SVIRENRGSKLTIGRGG+LKVQHLVSV KP+TSH HIDSAGYQQPSRIAFIEFFVKPEED+ N
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

XP_008442021.1 PREDICTED: uncharacterized protein LOC103486009 [Cucumis melo]

5.3e-164

95.68

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQP PPSVTFK EGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
        FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIP SVIRENRGSKLTIGRGG+LKVQHLVSVAKP+TSH HIDSAGYQQPSRIAFIEFFVKPEED++N
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

XP_022996322.1 uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima]

1.7e-162

94.68

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDAEAPDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD
        LS +E+KYPGPDMQLLLKSVDSLDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+L+P PPSVTFKGEGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVA+P+TSHPHIDSAGYQQ SRIAFIEFFVKPEED T+
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

XP_023534468.1 uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo]

7.7e-163

94.35

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDAEAPDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHG+VLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD
        LS +E+KYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+L+P PPSVTFKGEGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVA+P+TSHPHIDSAGYQQPSRIAFIEFFVKPEED T+
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

XP_038882945.1 uncharacterized protein LOC120074039 isoform X1 [Benincasa hispida]

1.6e-165

97.34

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD
        LSTIE+KYPGPDMQLL KSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQPDPPSVTFKGEGHG+LQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
        FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVAKP+TSHPHIDSAGYQQPSRIAFIEFFVKP EDATN
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L199 Uncharacterized protein

8.3e-163

94.68

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDL+CH DNVQGLVDAFT+VRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQP PPSVTFK EGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
        FMYYANTDLLISFHCD+QVSYRYKYKFLRATTSNIP SVIRENRGSKLTIGRGG+LKVQHLVSV KP+TSH HIDSAGYQQPSRIAFIEFFVKPEED+ N
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

A0A1S3B4R8 uncharacterized protein LOC103486009

2.6e-164

95.68

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQP PPSVTFK EGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
        FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIP SVIRENRGSKLTIGRGG+LKVQHLVSVAKP+TSH HIDSAGYQQPSRIAFIEFFVKPEED++N
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

A0A5D3DUR6 Syntaxin-22-like protein

2.6e-164

95.68

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQP PPSVTFK EGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
        FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIP SVIRENRGSKLTIGRGG+LKVQHLVSVAKP+TSH HIDSAGYQQPSRIAFIEFFVKPEED++N
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

A0A6J1GZY3 uncharacterized protein LOC111459157 isoform X1

1.4e-162

94.02

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD
        LS +E+KYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+L+P PPSVTFKGEGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVA+P+TSHPHIDSAGYQQPSRIAFIEFFVKPEED T+
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

A0A6J1K1L0 uncharacterized protein LOC111491589 isoform X1

8.3e-163

94.68

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDAEAPDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD
        LS +E+KYPGPDMQLLLKSVDSLDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+L+P PPSVTFKGEGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVA+P+TSHPHIDSAGYQQ SRIAFIEFFVKPEED T+
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

SwissProt top hits

e value

%identity

Alignment

Q9QWZ1 Cell cycle checkpoint protein RAD1

6.4e-19

25.34

Show/hide

Query:  LVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRLSTIELKYP
        LV  LDNV+ L     A+ ++ H  A    +++GI + VE + C+QA  ++Q ++F  +    ++   F ++L I +D L+ F     PG L+ + + Y 
Subjt:  LVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRLSTIELKYP

Query:  GPDMQLLLKSVDSLDACIYAEIRTRIP-DTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSV---TFKGEGHGDLQVDFMYYA
        G    L+L  ++        +I T+ P +T+ +D+    + +      ++S  L+EA  +L+  G  +QI + PD P     TF   G+  L     Y  
Subjt:  GPDMQLLLKSVDSLDACIYAEIRTRIP-DTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSV---TFKGEGHGDLQVDFMYYA

Query:  NTDLLISFHCDRQVSYRYKYKFLRATTS----NIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEED
        ++DL+ +FHCD+    RYK   L+ +T     +  +S+  +NR         G L +Q+++                  +  +I F+E++  P+E+
Subjt:  NTDLLISFHCDRQVSYRYKYKFLRATTS----NIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEED

Arabidopsis top hits

e value

%identity

Alignment

AT4G17760.1 damaged DNA binding;exodeoxyribonuclease IIIs

6.3e-139

77.44

Show/hide

Query:  SSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL
        SS A++ + PDL+C LDNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKVYLQRELF +YEY AQ RPRFG+SLG+ VD LNTFS PG  
Subjt:  SSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL

Query:  STIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVDF
        +TIE+KYPGPDM+LLLKSVD+L++CIY+EIRTRIP+T++WDYNFE AG +PL+FTVKSAALKEAIDDLEWPGSSVQI+LQ +PP V F+GEGHGDLQ+DF
Subjt:  STIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVDF

Query:  MYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDA
        MYYANTDLL++FHCD +VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV+K     P ++SAGYQ PSRIA+IEFFVKPEE A
Subjt:  MYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDA

AT4G17760.2 damaged DNA binding;exodeoxyribonuclease IIIs

3.1e-114

78.05

Show/hide

Query:  ESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSP
        ESGCLQAKVYLQRELF +YEY AQ RPRFG+SLG+ VD LNTFS PG  +TIE+KYPGPDM+LLLKSVD+L++CIY+EIRTRIP+T++WDYNFE AG +P
Subjt:  ESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSP

Query:  LSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGR
        L+FTVKSAALKEAIDDLEWPGSSVQI+LQ +PP V F+GEGHGDLQ+DFMYYANTDLL++FHCD +VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGR
Subjt:  LSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPISVIRENRGSKLTIGR

Query:  GGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDA
        GGMLKVQHLVSV+K     P ++SAGYQ PSRIA+IEFFVKPEE A
Subjt:  GGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDA

Sequences

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CDS sequence

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ATGAGCTCGTCGGCGGTGGATGCGGAGGCGCCCGATCTAGTTTGCCACCTTGACAACGTCCAAGGCCTGGTGGATGCCTTCACTGCCGTTCGATGGAAGCGCCATCAGGA
CGCCGTAATCGAACTATCGGAACATGGCATCGTTTTGATCGTTGAAGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGCTTTTCATTCGTTATGAATACA
GTGCACAAGCTCGGCCTAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGTTTGAATACATTTTCTGTTCCTGGACGTTTAAGCACTATTGAGCTCAAATACCCGGGA
CCTGATATGCAACTTCTTCTCAAGTCAGTCGATTCGTTAGATGCTTGCATTTACGCGGAGATCAGAACCAGAATCCCAGATACGATCTCATGGGATTACAATTTTGAACC
TGCAGGAAGCAGCCCACTCAGTTTCACTGTCAAGTCTGCAGCACTTAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCAGATAGCTCTACAACCGGATC
CCCCTTCTGTCACCTTCAAAGGCGAAGGCCATGGAGACTTGCAGGTGGATTTCATGTATTATGCAAATACCGATCTTCTTATCTCGTTCCATTGTGATCGACAAGTATCC
TACAGGTACAAATACAAGTTTCTCCGTGCGACGACTTCGAACATACCGATCAGTGTGATAAGAGAAAACAGGGGTAGCAAATTGACTATTGGAAGAGGAGGAATGCTAAA
AGTTCAGCACCTTGTTTCTGTTGCAAAACCAACCACTTCACACCCACATATAGATTCTGCTGGTTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAAC
CAGAAGAAGATGCCACAAATGACTAG

mRNA sequence

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Protein sequence

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MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPG
PDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVS
YRYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATND

HG10017476 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome