; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017492 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017492
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProline-rich protein HaeIII subfamily 1-like
Genome locationChr03:14905856..14906425
RNA-Seq ExpressionHG10017492
SyntenyHG10017492
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037987.1 hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa]1.7e-2264.89Show/hide
Query:  ENKLSDKNLK----HTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPPSGPTQRT
        EN+L     K    H  FS  KPKRVPDLAPPFSLGIL    RTPP G SQRT DNP PPPHA  I++HK+S I +GILPKGVR+PPSGP+ RT
Subjt:  ENKLSDKNLK----HTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPPSGPTQRT

KAA0038012.1 hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa]9.1e-2162.77Show/hide
Query:  ENKLSDKNLK----HTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPPSGPTQRT
        EN+L     K    H  FS  KPKRVPDLAPPFSLGILS   RTPPSG SQRT DNP  PPH   I++HK+S I +GILPKGV +P SGP+ RT
Subjt:  ENKLSDKNLK----HTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPPSGPTQRT

KAA0040932.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]1.3e-2759.48Show/hide
Query:  SRCQKIFVVDEGDSIVENKLSDKNLKH----THFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVR
        +  ++ FVVDE +S +EN L    + H     HFS  KPK++PDLAPPFSLGILS   RTPPSG SQ TS+N PP PH + I++HK+S +N+GILPKGVR
Subjt:  SRCQKIFVVDEGDSIVENKLSDKNLKH----THFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVR

Query:  IPPSGPTQRTSESPPP
        IPPSGP++RTS+ PPP
Subjt:  IPPSGPTQRTSESPPP

KAA0043502.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]7.2e-1848.74Show/hide
Query:  QKIFVVDEGDSIVENKLSDKNLKH----THFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPP
        + +F V E +S+ EN+L   ++ H     HFS+ K K  P+    F  GI S   R PPSGPSQR+SD+PP P    S+++ K+S IN+GILPKG RIPP
Subjt:  QKIFVVDEGDSIVENKLSDKNLKH----THFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPP

Query:  SGPTQRTSESP-PPHHMSH
        SGP+QR S+SP PP    H
Subjt:  SGPTQRTSESP-PPHHMSH

XP_038882352.1 uncharacterized protein LOC120073615 [Benincasa hispida]7.7e-3668.14Show/hide
Query:  QKIFVVDEGDSIVENKLSDKNLK----HTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPP
        + +FVV++GDS +EN+LSD+N+K    H HFS+GK KR+PDLAPPF+LGILS +ER PPSG SQ TSDNPPPPPH  SI++HK+S IN+ +L KG RIPP
Subjt:  QKIFVVDEGDSIVENKLSDKNLK----HTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPP

Query:  SGPTQRTSESPPP
        SGP+QRTSESPPP
Subjt:  SGPTQRTSESPPP

TrEMBL top hitse value%identityAlignment
A0A5A7T8R0 Uncharacterized protein8.1e-2364.89Show/hide
Query:  ENKLSDKNLK----HTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPPSGPTQRT
        EN+L     K    H  FS  KPKRVPDLAPPFSLGIL    RTPP G SQRT DNP PPPHA  I++HK+S I +GILPKGVR+PPSGP+ RT
Subjt:  ENKLSDKNLK----HTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPPSGPTQRT

A0A5D3BP86 Proline-rich protein HaeIII subfamily 1-like3.5e-1848.74Show/hide
Query:  QKIFVVDEGDSIVENKLSDKNLKH----THFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPP
        + +F V E +S+ EN+L   ++ H     HFS+ K K  P+    F  GI S   R PPSGPSQR+SD+PP P    S+++ K+S IN+GILPKG RIPP
Subjt:  QKIFVVDEGDSIVENKLSDKNLKH----THFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPP

Query:  SGPTQRTSESP-PPHHMSH
        SGP+QR S+SP PP    H
Subjt:  SGPTQRTSESP-PPHHMSH

A0A5D3BVE5 Uncharacterized protein4.4e-2162.77Show/hide
Query:  ENKLSDKNLK----HTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPPSGPTQRT
        EN+L     K    H  FS  KPKRVPDLAPPFSLGILS   RTPPSG SQRT DNP  PPH   I++HK+S I +GILPKGV +P SGP+ RT
Subjt:  ENKLSDKNLK----HTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPPSGPTQRT

A0A5D3CGG1 Proline-rich protein HaeIII subfamily 1-like6.4e-2859.48Show/hide
Query:  SRCQKIFVVDEGDSIVENKLSDKNLKH----THFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVR
        +  ++ FVVDE +S +EN L    + H     HFS  KPK++PDLAPPFSLGILS   RTPPSG SQ TS+N PP PH + I++HK+S +N+GILPKGVR
Subjt:  SRCQKIFVVDEGDSIVENKLSDKNLKH----THFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVR

Query:  IPPSGPTQRTSESPPP
        IPPSGP++RTS+ PPP
Subjt:  IPPSGPTQRTSESPPP

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like5.1e-1770.15Show/hide
Query:  SLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPPSGPTQRTSESPPP
        +LG+L      PPSGPSQRTSD PPPPPHASS++++KQS IN+G+LPKGV IPPSGP+QRTS  PPP
Subjt:  SLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGILPKGVRIPPSGPTQRTSESPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTTTCGGAGCTTGTGCTCTCGTGCTCTTGGGTTGCACATTACAATCTATCAAGCAGATGCCAAAAAATTTTTGTAGTCGACGAAGGCGACTCTATTGTAGAAAA
CAAATTGAGTGACAAGAATTTAAAGCATACGCATTTCTCAATAGGGAAACCCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGCATACTGTCCAATAAAGAAC
GCACTCCCCCGTCTGGACCGAGTCAAAGAACTTCAGACAATCCACCTCCCCCACCGCATGCCTCATCCATCGTTGTACACAAGCAATCTGGGATCAACTATGGAATATTA
CCAAAAGGCGTGCGTATTCCTCCGTCTGGGCCGACTCAGAGAACTTCTGAGAGTCCACCTCCCCACCACATGTCCCATCCGCCGTTTTACACGAGGAATCTGGGATCAAC
TTCGGGGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGCAAAAGATTTTCGGACTATCCACCTCCTCCACCGCATGCTCCTTCTGTTGTTTTACATGAAGA
ATCTAAGATTCATTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTTTCGGAGCTTGTGCTCTCGTGCTCTTGGGTTGCACATTACAATCTATCAAGCAGATGCCAAAAAATTTTTGTAGTCGACGAAGGCGACTCTATTGTAGAAAA
CAAATTGAGTGACAAGAATTTAAAGCATACGCATTTCTCAATAGGGAAACCCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGCATACTGTCCAATAAAGAAC
GCACTCCCCCGTCTGGACCGAGTCAAAGAACTTCAGACAATCCACCTCCCCCACCGCATGCCTCATCCATCGTTGTACACAAGCAATCTGGGATCAACTATGGAATATTA
CCAAAAGGCGTGCGTATTCCTCCGTCTGGGCCGACTCAGAGAACTTCTGAGAGTCCACCTCCCCACCACATGTCCCATCCGCCGTTTTACACGAGGAATCTGGGATCAAC
TTCGGGGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGCAAAAGATTTTCGGACTATCCACCTCCTCCACCGCATGCTCCTTCTGTTGTTTTACATGAAGA
ATCTAAGATTCATTTTGTGA
Protein sequenceShow/hide protein sequence
MCFSELVLSCSWVAHYNLSSRCQKIFVVDEGDSIVENKLSDKNLKHTHFSIGKPKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNPPPPPHASSIVVHKQSGINYGIL
PKGVRIPPSGPTQRTSESPPPHHMSHPPFYTRNLGSTSGYYQKECVFLRLGRAKDFRTIHLLHRMLLLLFYMKNLRFIL