; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017494 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017494
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionleucine-rich repeat extensin-like protein 5
Genome locationChr03:14916416..14916796
RNA-Seq ExpressionHG10017494
SyntenyHG10017494
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF52015.1 conserved hypothetical protein [Ricinus communis]2.1e-1340.3Show/hide
Query:  NSSPPPSNKADFGVYPKGFLIPPPSSIHNSS------PPL--SSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPS-
        N+ P    +  FG+ PKG  IPP      SS      PPL   S +NFG+ PKG  +PP  P   S PP S  ++FG+ PKG  IPP  P   S PPP+ 
Subjt:  NSSPPPSNKADFGVYPKGFLIPPPSSIHNSS------PPL--SSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPS-

Query:  -----HKNIYFGVYPKGFFVPPPSTIHNSSPPPT
             +KN+ FG+ PKG  +PP      +S PP+
Subjt:  -----HKNIYFGVYPKGFFVPPPSTIHNSSPPPT

KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]4.8e-1037.65Show/hide
Query:  PSSIHNSSPPP------------SNKADFGVYPKGFLIPP--PSSIHNSSPP-----------LSSKINFGVYPKGFFVPPPSPIHNSS----PPP----
        PS   ++ PPP             +K +FG+ PKG  IPP  PS   +  PP             SKINFG+ PKG  +PP  P   +S    PPP    
Subjt:  PSSIHNSSPPP------------SNKADFGVYPKGFLIPP--PSSIHNSSPP-----------LSSKINFGVYPKGFFVPPPSPIHNSS----PPP----

Query:  -----SNKINFGVHPKGFSIPPPSPIHNSS---PPPSH---KNIYFGVYPKGFFVPP--PSTIHNSSPPP
              +KINFG+ PKG  IPP  P   +S   PPP H     I FG+ PKG  +PP  PS   +  PPP
Subjt:  -----SNKINFGVHPKGFSIPPPSPIHNSS---PPPSH---KNIYFGVYPKGFFVPP--PSTIHNSSPPP

XP_004498022.1 proline-rich protein 2-like [Cicer arietinum]4.7e-1343.61Show/hide
Query:  SIHNSSPPPSNKADFGVYPKGFLIPP-PSSIHNSS--PPLSSKINFGVYPKGFFVPP--PSPIHNSSPPPSNKINFGVHPKGFSIP--PPSPIHNSSPPP
        S ++S PPP    +FGV  KG ++P  PS+  + S  PP  + ++FG+ PKG +VPP  PS   + SPPP   +NFGV  KG  +P  P +   +S PPP
Subjt:  SIHNSSPPPSNKADFGVYPKGFLIPP-PSSIHNSS--PPLSSKINFGVYPKGFFVPP--PSPIHNSSPPPSNKINFGVHPKGFSIP--PPSPIHNSSPPP

Query:  SHKNIYFGVYPKGFFVPP--PSTIHNSSPPPTK
         H N++F + PKG +VPP  PST  + SPPP +
Subjt:  SHKNIYFGVYPKGFFVPP--PSTIHNSSPPPTK

XP_011468468.1 PREDICTED: formin-like protein 20 [Fragaria vesca subsp. vesca]1.1e-0938.33Show/hide
Query:  PPPSNKADFGVYPKGFLIPPPSSIHNSS---PPLSSKINFGVYPKGFFVPPPSP-IHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPSHKNIYFGV
        PP S+K +     K    PP   +H S+   PP  + +NFG+  KG  VPP +P  +   PPP N +N G+ PKG  +PP +P     P P H ++ FGV
Subjt:  PPPSNKADFGVYPKGFLIPPPSSIHNSS---PPLSSKINFGVYPKGFFVPPPSP-IHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPSHKNIYFGV

Query:  YPKGFFVPPPSTIHNSSPPP
         PKG  +PP +   +  PPP
Subjt:  YPKGFFVPPPSTIHNSSPPP

XP_022967687.1 actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]2.4e-0938.04Show/hide
Query:  PSSIHNSSPPPSNKAD-----------FGVYPKGFLIPPPSSIHNSS-----PP--------LSSKINFGVYPKGFFVPPPSPIHNSS---PPPSN----
        PS   +  PPP  +A             G+ P+G  IPPP     +S     PP          SKINFG+ PKG  +PP  P H +S   PPP +    
Subjt:  PSSIHNSSPPPSNKAD-----------FGVYPKGFLIPPPSSIHNSS-----PP--------LSSKINFGVYPKGFFVPPPSPIHNSS---PPPSN----

Query:  KINFGVHPKGFSIPPPSPIHNSS---PPPSH---KNIYFGVYPKGFFVPP--PSTIHNSSPPP
        KINFG+ PK   IPP  P   +S   PPP H     I FG+ PKG  +PP  PS   +  PPP
Subjt:  KINFGVHPKGFSIPPPSPIHNSS---PPPSH---KNIYFGVYPKGFFVPP--PSTIHNSSPPP

TrEMBL top hitse value%identityAlignment
A0A061FHV4 Uncharacterized protein2.0e-0943.88Show/hide
Query:  PLSSKINFGVYPKGFFVPPPSPIHNSS-----PPPSNKINFGVHPKGFSIPPPSPIHNSS----PPPSHKNIYFGVYPKGFFVPP--PSTIHNSSPPP
        P +S++NFGV+PKG  +PP  P   +S     PPP   +NFG+ PKG  IPP  P   +S    PPP    + FG +PKG  +PP  PS   ++SPPP
Subjt:  PLSSKINFGVYPKGFFVPPPSPIHNSS-----PPPSNKINFGVHPKGFSIPPPSPIHNSS----PPPSHKNIYFGVYPKGFFVPP--PSTIHNSSPPP

A0A1S2Y3N8 proline-rich protein 2-like2.3e-1343.61Show/hide
Query:  SIHNSSPPPSNKADFGVYPKGFLIPP-PSSIHNSS--PPLSSKINFGVYPKGFFVPP--PSPIHNSSPPPSNKINFGVHPKGFSIP--PPSPIHNSSPPP
        S ++S PPP    +FGV  KG ++P  PS+  + S  PP  + ++FG+ PKG +VPP  PS   + SPPP   +NFGV  KG  +P  P +   +S PPP
Subjt:  SIHNSSPPPSNKADFGVYPKGFLIPP-PSSIHNSS--PPLSSKINFGVYPKGFFVPP--PSPIHNSSPPPSNKINFGVHPKGFSIP--PPSPIHNSSPPP

Query:  SHKNIYFGVYPKGFFVPP--PSTIHNSSPPPTK
         H N++F + PKG +VPP  PST  + SPPP +
Subjt:  SHKNIYFGVYPKGFFVPP--PSTIHNSSPPPTK

A0A1S3E4Y7 leucine-rich repeat extensin-like protein 52.0e-0937.84Show/hide
Query:  PSSIHNSSP--PPSNKADFGVYPKGFLIPPPSSIHNSS---PPLSSKINFGVYPKGFFVPPPSPI---------------HNSSPPPSNKINFGVHPKGF
        PS+  + SP  PP    +FG+ PKG + P   S  +S    PP  + ++FG+ PK   VPP  P                ++S PPP   +NFGV PKG 
Subjt:  PSSIHNSSP--PPSNKADFGVYPKGFLIPPPSSIHNSS---PPLSSKINFGVYPKGFFVPPPSPI---------------HNSSPPPSNKINFGVHPKGF

Query:  SIPPPSPIHNSS---PPPSHKNIYFGVYPKGFFVPP-PSTIHNSSPPP
         +PP  P   SS   P P H N++F + PKG+  P  PST  + SPPP
Subjt:  SIPPPSPIHNSS---PPPSHKNIYFGVYPKGFFVPP-PSTIHNSSPPP

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like1.2e-0938.04Show/hide
Query:  PSSIHNSSPPPSNKAD-----------FGVYPKGFLIPPPSSIHNSS-----PP--------LSSKINFGVYPKGFFVPPPSPIHNSS---PPPSN----
        PS   +  PPP  +A             G+ P+G  IPPP     +S     PP          SKINFG+ PKG  +PP  P H +S   PPP +    
Subjt:  PSSIHNSSPPPSNKAD-----------FGVYPKGFLIPPPSSIHNSS-----PP--------LSSKINFGVYPKGFFVPPPSPIHNSS---PPPSN----

Query:  KINFGVHPKGFSIPPPSPIHNSS---PPPSH---KNIYFGVYPKGFFVPP--PSTIHNSSPPP
        KINFG+ PK   IPP  P   +S   PPP H     I FG+ PKG  +PP  PS   +  PPP
Subjt:  KINFGVHPKGFSIPPPSPIHNSS---PPPSH---KNIYFGVYPKGFFVPP--PSTIHNSSPPP

B9RB38 Uncharacterized protein1.0e-1340.3Show/hide
Query:  NSSPPPSNKADFGVYPKGFLIPPPSSIHNSS------PPL--SSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPS-
        N+ P    +  FG+ PKG  IPP      SS      PPL   S +NFG+ PKG  +PP  P   S PP S  ++FG+ PKG  IPP  P   S PPP+ 
Subjt:  NSSPPPSNKADFGVYPKGFLIPPPSSIHNSS------PPL--SSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPS-

Query:  -----HKNIYFGVYPKGFFVPPPSTIHNSSPPPT
             +KN+ FG+ PKG  +PP      +S PP+
Subjt:  -----HKNIYFGVYPKGFFVPPPSTIHNSSPPPT

SwissProt top hitse value%identityAlignment
C1PGW1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A5.2e-0739.2Show/hide
Query:  SSPPPSNKADFGVYPKGFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSN----KINFGVHPKGFSIPPPSPIHNSSPPP---SHKN
        ++PPP+        P  F+ PPP S+   SPP S      V P    VPPPSP H  SPPP           V P   ++PPPSP H   PPP      +
Subjt:  SSPPPSNKADFGVYPKGFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSN----KINFGVHPKGFSIPPPSPIHNSSPPP---SHKN

Query:  IYFGVYPKGFFVPPPSTIHNSSPPP
         +F V P    VPPPS  H + PPP
Subjt:  IYFGVYPKGFFVPPPSTIHNSSPPP

E9PYK3 Protein mono-ADP-ribosyltransferase PARP42.0e-0632.7Show/hide
Query:  PSSIHNSSPPPSNKADFGVYPKGFLIPPPSSI----HNSSPPLSSK---------INFGVY-------PKGFFVPPPSPIHNSS-PPPSNKINFGVH---
        P   H   PPP         P G LIPP SS+    H   PPL S          ++ G +       P G  +PPP PI  S+ PPP + +  G H   
Subjt:  PSSIHNSSPPPSNKADFGVYPKGFLIPPPSSI----HNSSPPLSSK---------INFGVY-------PKGFFVPPPSPIHNSS-PPPSNKINFGVH---

Query:  ----PKGFSIPPPSPIHNSSPPPSHKNIYFGVY-------PKGFFVPPPSTIHNSSPPP
            P G  IPPP PI   +  PS  +++ G +       P G  +PPP  I  S+ PP
Subjt:  ----PKGFSIPPPSPIHNSSPPPSHKNIYFGVY-------PKGFFVPPPSTIHNSSPPP

O65375 Leucine-rich repeat extensin-like protein 12.4e-0434.38Show/hide
Query:  SSPPPSNKADFGVYPKGFLIPPPSS--------IHNSSPPLSSKINFGV--YPKGFFVPPPSPIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPS
        SSPPP   +      + +  PPP S         ++  PP  SK++  V  YP     PPPSP    SPPP    +    P  +S PPP P   SSPPP 
Subjt:  SSPPPSNKADFGVYPKGFLIPPPSS--------IHNSSPPLSSKINFGV--YPKGFFVPPPSPIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPS

Query:  HKNIYFGVYPKGFFVPPPSTIHNSSPPP
                 P  +  PPP  +++S PPP
Subjt:  HKNIYFGVYPKGFFVPPPSTIHNSSPPP

Q9T0K5 Leucine-rich repeat extensin-like protein 38.0e-0838.46Show/hide
Query:  PPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPK---GFSIPPPSPIHNSSPPPSHKNIYFGVYPKGFFV---PPPSTIHNS
        PPP  +H SSPP          P  +  PPP P++ SSPPP   +++   P     +  PPPSP+H SSPPP          P    V   PPP  +H+S
Subjt:  PPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPK---GFSIPPPSPIHNSSPPPSHKNIYFGVYPKGFFV---PPPSTIHNS

Query:  SPPP
         PPP
Subjt:  SPPP

Q9XIB6 Pollen-specific leucine-rich repeat extensin-like protein 25.8e-0638.28Show/hide
Query:  PSSIHNSSPPPSNKADFGVYPKGFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPS---PIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPSH
        PS I+ S PPP +     VY      PPP  +++  PP++S             PPPS   P+H+  PPP     F   P  FS PPPSP++ S PPPSH
Subjt:  PSSIHNSSPPPSNKADFGVYPKGFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPS---PIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPSH

Query:  KNIYFGVYPKGFFVPPPSTIHNSSPPPT
                P   + PPP T    SPPPT
Subjt:  KNIYFGVYPKGFFVPPPSTIHNSSPPPT

Arabidopsis top hitse value%identityAlignment
AT1G49490.1 Leucine-rich repeat (LRR) family protein4.1e-0738.28Show/hide
Query:  PSSIHNSSPPPSNKADFGVYPKGFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPS---PIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPSH
        PS I+ S PPP +     VY      PPP  +++  PP++S             PPPS   P+H+  PPP     F   P  FS PPPSP++ S PPPSH
Subjt:  PSSIHNSSPPPSNKADFGVYPKGFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPS---PIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPSH

Query:  KNIYFGVYPKGFFVPPPSTIHNSSPPPT
                P   + PPP T    SPPPT
Subjt:  KNIYFGVYPKGFFVPPPSTIHNSSPPPT

AT2G24980.1 Proline-rich extensin-like family protein4.4e-0936.51Show/hide
Query:  PSSIHNSSPPPSNKADFGVYPKGFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPK-GFSIPPPSPIHNSSPPPSHKN
        P  ++NS PPP       VY K    PPP  +++S PP      +   PK ++  PP P   SSPPP     +   PK  +  PPPS +++S PPP    
Subjt:  PSSIHNSSPPPSNKADFGVYPKGFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPK-GFSIPPPSPIHNSSPPPSHKN

Query:  IYFGVYPKGFF-VPPPSTIHNSSPPP
         Y+   PK ++  PPPS +++S PPP
Subjt:  IYFGVYPKGFF-VPPPSTIHNSSPPP

AT4G08400.1 Proline-rich extensin-like family protein1.8e-0736.8Show/hide
Query:  SIHNSSPPPSNKADFGVYPK-GFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPK-GFSIPPPSPIHNSSPPPSHKNI
        SI++SSPPPS    +   PK  +  PPPS +++S PP      +   PK  +   P P   SSPPP     +   PK  +  PPP  +++S PPP     
Subjt:  SIHNSSPPPSNKADFGVYPK-GFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPK-GFSIPPPSPIHNSSPPPSHKNI

Query:  YFGVYPKG-FFVPPPSTIHNSSPPP
        Y+   PKG +  PPP  +++S PPP
Subjt:  YFGVYPKG-FFVPPPSTIHNSSPPP

AT4G08410.1 Proline-rich extensin-like family protein1.8e-0736.8Show/hide
Query:  SIHNSSPPPSNKADFGVYPK-GFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPK-GFSIPPPSPIHNSSPPPSHKNI
        SI++SSPPPS    +   PK  +  PPPS +++S PP      +   PK  +   P P   SSPPP     +   PK  +  PPP  +++S PPP     
Subjt:  SIHNSSPPPSNKADFGVYPK-GFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPK-GFSIPPPSPIHNSSPPPSHKNI

Query:  YFGVYPKG-FFVPPPSTIHNSSPPP
        Y+   PKG +  PPP  +++S PPP
Subjt:  YFGVYPKG-FFVPPPSTIHNSSPPP

AT4G13340.1 Leucine-rich repeat (LRR) family protein5.7e-0938.46Show/hide
Query:  PPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPK---GFSIPPPSPIHNSSPPPSHKNIYFGVYPKGFFV---PPPSTIHNS
        PPP  +H SSPP          P  +  PPP P++ SSPPP   +++   P     +  PPPSP+H SSPPP          P    V   PPP  +H+S
Subjt:  PPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPK---GFSIPPPSPIHNSSPPPSHKNIYFGVYPKGFFV---PPPSTIHNS

Query:  SPPP
         PPP
Subjt:  SPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTAGTTCGATACATAATTCTTCTCCTCCTCCATCCAATAAGGCTGACTTTGGAGTTTACCCAAAAGGCTTTTTGATACCTCCACCTAGCTCAATACATAACTCT
TCACCTCCTCTATCTAGTAAGATTAACTTTGGAGTTTATCCAAAAGGCTTTTTTGTACCTCCACCTAGCCCAATACATAACTCTTCTCCTCCTCCTTCCAACAAG
ATTAACTTTGGAGTTCATCCAAAAGGCTTTTCTATACCTCCTCCTAGCCCGATACACAACTCTTCTCCTCCTCCATCACATAAGAATATTTACTTTGGAGTTTAT
CCAAAGGGCTTTTTTGTACCTCCACCTAGCACAATACATAACTCTTCTCCTCCTCCCACCAAATAA
mRNA sequenceShow/hide mRNA sequence
CCTAGTTCGATACATAATTCTTCTCCTCCTCCATCCAATAAGGCTGACTTTGGAGTTTACCCAAAAGGCTTTTTGATACCTCCACCTAGCTCAATACATAACTCT
TCACCTCCTCTATCTAGTAAGATTAACTTTGGAGTTTATCCAAAAGGCTTTTTTGTACCTCCACCTAGCCCAATACATAACTCTTCTCCTCCTCCTTCCAACAAG
ATTAACTTTGGAGTTCATCCAAAAGGCTTTTCTATACCTCCTCCTAGCCCGATACACAACTCTTCTCCTCCTCCATCACATAAGAATATTTACTTTGGAGTTTAT
CCAAAGGGCTTTTTTGTACCTCCACCTAGCACAATACATAACTCTTCTCCTCCTCCCACCAAATAA
Protein sequenceShow/hide protein sequence
PSSIHNSSPPPSNKADFGVYPKGFLIPPPSSIHNSSPPLSSKINFGVYPKGFFVPPPSPIHNSSPPPSNKINFGVHPKGFSIPPPSPIHNSSPPPSHKNIYFGVY
PKGFFVPPPSTIHNSSPPPTK