; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017554 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017554
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionR3H domain-containing protein 1-like isoform X1
Genome locationChr03:15659884..15662559
RNA-Seq ExpressionHG10017554
SyntenyHG10017554
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001374 - R3H domain
IPR024771 - SUZ domain
IPR036867 - R3H domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54887.2 hypothetical protein Csa_012257 [Cucumis sativus]4.4e-15184.66Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR
        MDSSS SSIDA PD LKDKVS VDPFL+EALHNPRHRLTILRMELDIQRFLQNQ+QQ+ EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQ RILV+
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR

Query:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA
        KTVEARFPT+ +S IPAKQ ADDKPGHVKIAIRPRP+K SD+AGNCMA+QS  R+VEQRKEEYD ARARIFSSQGS G V++L H   EGL I PNRDR 
Subjt:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA

Query:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ
        E+CRVNDVEKYTS+ DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NFAPFTVQNI PSFTGYHVPRNEVSL Y+SP PIKTVGLNQ
Subjt:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ

Query:  VSRTSANAPWPCAGMPYTHSAFQAPL
        VSR SAN PWPCAGMPY H+AFQ  L
Subjt:  VSRTSANAPWPCAGMPYTHSAFQAPL

TYK22607.1 R3H domain-containing protein 1-like isoform X1 [Cucumis melo var. makuwa]8.4e-15085.45Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR
        MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLTILRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQ RILV+
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR

Query:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA
        KTVEARFPT+ +S IPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMA+QS GR+VEQRKEEYD ARARIFSSQ S+GSVD+LSH  TEGL I PNRDRA
Subjt:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA

Query:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ
        E+CRVNDVEKY S  DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV L Y+SP  IKTVGLNQ
Subjt:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ

Query:  VSRTSANAPWPCAGMPYTHSAFQ
        +SR+SAN PWPCAGMPY HSAFQ
Subjt:  VSRTSANAPWPCAGMPYTHSAFQ

XP_008455743.1 PREDICTED: R3H domain-containing protein 1-like isoform X1 [Cucumis melo]9.8e-15985.55Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR
        MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLTILRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQ RILV+
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR

Query:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA
        KTVEARFPT+ +S IPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMA+QS GR+VEQRKEEYD ARARIFSSQ S+GSVD+LSH  TEGL I PNRDRA
Subjt:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA

Query:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ
        E+CRVNDVEKY S  DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV L Y+SP  IKTVGLNQ
Subjt:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ

Query:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN
        +SR+SAN PWPCAGMPY HSAFQAPLYQQSLSFDY++YN
Subjt:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN

XP_011653850.1 uncharacterized protein LOC101216736 [Cucumis sativus]5.2e-16085.55Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR
        MDSSS SSIDA PD LKDKVS VDPFL+EALHNPRHRLTILRMELDIQRFLQNQ+QQ+ EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQ RILV+
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR

Query:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA
        KTVEARFPT+ +S IPAKQ ADDKPGHVKIAIRPRP+K SD+AGNCMA+QS  R+VEQRKEEYD ARARIFSSQGS G V++L H   EGL I PNRDR 
Subjt:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA

Query:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ
        E+CRVNDVEKYTS+ DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NFAPFTVQNI PSFTGYHVPRNEVSL Y+SP PIKTVGLNQ
Subjt:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ

Query:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN
        VSR SAN PWPCAGMPY H+AFQAPLYQQSLSFDYL+YN
Subjt:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN

XP_038883354.1 R3H domain-containing protein 1-like [Benincasa hispida]3.3e-16287.91Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR
        MDSSSASSID FPD LKDKVS VDPFL+EALHNPRHRLTILRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQT VQDNGIDGQ RILVR
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR

Query:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA
        KTVEARFPTV +S IPAKQSADDKPG VKIAIRPRP+KSSDDAGNCMA+QSLGRSVEQRKEEYD ARARIFSSQGS GSVD+LS    E LDISPNRDR 
Subjt:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA

Query:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ
        EECRVN+VEK TS+KD GN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFT+QN+PPSF+GYHVPRNE SL Y+SP  IKTVGLNQ
Subjt:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ

Query:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN
        VSR SANAPWPCAGMPYTH+AFQAPLY QSLSFDY++YN
Subjt:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN

TrEMBL top hitse value%identityAlignment
A0A0A0L247 Uncharacterized protein2.5e-16085.55Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR
        MDSSS SSIDA PD LKDKVS VDPFL+EALHNPRHRLTILRMELDIQRFLQNQ+QQ+ EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQ RILV+
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR

Query:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA
        KTVEARFPT+ +S IPAKQ ADDKPGHVKIAIRPRP+K SD+AGNCMA+QS  R+VEQRKEEYD ARARIFSSQGS G V++L H   EGL I PNRDR 
Subjt:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA

Query:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ
        E+CRVNDVEKYTS+ DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NFAPFTVQNI PSFTGYHVPRNEVSL Y+SP PIKTVGLNQ
Subjt:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ

Query:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN
        VSR SAN PWPCAGMPY H+AFQAPLYQQSLSFDYL+YN
Subjt:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN

A0A1S3C2A6 R3H domain-containing protein 1-like isoform X14.8e-15985.55Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR
        MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLTILRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQ RILV+
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR

Query:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA
        KTVEARFPT+ +S IPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMA+QS GR+VEQRKEEYD ARARIFSSQ S+GSVD+LSH  TEGL I PNRDRA
Subjt:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA

Query:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ
        E+CRVNDVEKY S  DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV L Y+SP  IKTVGLNQ
Subjt:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ

Query:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN
        +SR+SAN PWPCAGMPY HSAFQAPLYQQSLSFDY++YN
Subjt:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN

A0A5A7SJ76 R3H domain-containing protein 1-like isoform X14.8e-15985.55Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR
        MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLTILRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQ RILV+
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR

Query:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA
        KTVEARFPT+ +S IPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMA+QS GR+VEQRKEEYD ARARIFSSQ S+GSVD+LSH  TEGL I PNRDRA
Subjt:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA

Query:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ
        E+CRVNDVEKY S  DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV L Y+SP  IKTVGLNQ
Subjt:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ

Query:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN
        +SR+SAN PWPCAGMPY HSAFQAPLYQQSLSFDY++YN
Subjt:  VSRTSANAPWPCAGMPYTHSAFQAPLYQQSLSFDYLRYN

A0A5D3DFX8 R3H domain-containing protein 1-like isoform X14.0e-15085.45Show/hide
Query:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR
        MDSSSAS IDAFPD LKDKVS+VDPFL+E LHNPRHRLTILRMELDIQRFLQNQEQQV EFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQ RILV+
Subjt:  MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVR

Query:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA
        KTVEARFPT+ +S IPAKQ ADDKPGHVKIA+RP+P+K SDDAGNCMA+QS GR+VEQRKEEYD ARARIFSSQ S+GSVD+LSH  TEGL I PNRDRA
Subjt:  KTVEARFPTVSIS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRA

Query:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ
        E+CRVNDVEKY S  DAGN ASSRVAI RDREKDLSDPDYDRSYERYVKSLPINLTPS+NF PFT QNI PSFTGYHVPRNEV L Y+SP  IKTVGLNQ
Subjt:  EECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQ

Query:  VSRTSANAPWPCAGMPYTHSAFQ
        +SR+SAN PWPCAGMPY HSAFQ
Subjt:  VSRTSANAPWPCAGMPYTHSAFQ

A0A6J1DP27 R3H domain-containing protein 1-like isoform X17.9e-14681.79Show/hide
Query:  DCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVRKTVEARFPTVSIS
        D LKDKVSMVDPFLVEAL NPRHRLTILRMELDIQ FLQNQEQQ+ EFQHF TSYLRLAAHRVAQHYGLQTMVQDN IDGQ RILVRKTVEA+FP + +S
Subjt:  DCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVRKTVEARFPTVSIS

Query:  -IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRAEECRVNDVEKYTS
         IPAKQSADD  G VKIA+RPRP+KSSDD   CMA+Q LGR+VEQRKEEYD ARARIFSSQGS GSVD+ SH FTEGLDIS NRDRAE CRVNDV+KY+S
Subjt:  -IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRAEECRVNDVEKYTS

Query:  IKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQVSRTSANAPWPCA
        IKDAG+  +SRVAI RDREKDLSDPDYDRSY+RYVK+LPIN TPSMNFAPFT+QNI PSF GYHVPRN+V L Y+SP PIKTVGLN +SRT+ N PWPCA
Subjt:  IKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQVSRTSANAPWPCA

Query:  GMPYTHSAFQAPLYQQSLSFDYLR
        GMPYTH+AFQ PLYQQSLSF+YL+
Subjt:  GMPYTHSAFQAPLYQQSLSFDYLR

SwissProt top hitse value%identityAlignment
A0JNC2 R3H domain-containing protein 21.1e-0829.95Show/hide
Query:  FLVEAL-HNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVRKTVEARFPTVSISIPAKQSADD
        FLV  L  NPR R+ +L++E +I  F+ +   Q   F+ FP  TSY R+  HRVA ++G+   V   G      +++ KT   R P    S   K   + 
Subjt:  FLVEAL-HNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVRKTVEARFPTVSISIPAKQSADD

Query:  KPGHVKIAIRPRPSKSSDDAGNCMAEQS--LGRSVEQRKEEYDNARARIFSSQ-GSNGSVDLLSHAFTEGLD-ISPNRDRAEECRVNDVE--KYTSIKDA
        +     I  R   S   DD    +  Q     +S+E+R+EEY   R RIF+ + G NG ++ +     EGL   S +R  + +  +  +E   ++S    
Subjt:  KPGHVKIAIRPRPSKSSDDAGNCMAEQS--LGRSVEQRKEEYDNARARIFSSQ-GSNGSVDLLSHAFTEGLD-ISPNRDRAEECRVNDVE--KYTSIKDA

Query:  GNLASSR
        G++ S R
Subjt:  GNLASSR

Q15032 R3H domain-containing protein 13.5e-1030.73Show/hide
Query:  FLVEAL-HNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVRKTVEARFPTVSISIPAKQSADDK-
        FLV  L +NPR R+ +L++E +I  F+ N E    +F    TSY R+  HRVA ++GL   V  +G      ++V KT   R P    +   K   DDK 
Subjt:  FLVEAL-HNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVRKTVEARFPTVSISIPAKQSADDK-

Query:  PGHVKIAIRPRPSKSSDDAGNCM----AEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNL
            K  I  R + S D   N M     +    +S+E+R+EEY  AR RIFS        + +     +  D S  + R +  RVN        KDA   
Subjt:  PGHVKIAIRPRPSKSSDDAGNCM----AEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNL

Query:  ASSRVAIFRDREKDLSDP
        +++      + E   S+P
Subjt:  ASSRVAIFRDREKDLSDP

Q80TM6 R3H domain-containing protein 23.3e-0832.91Show/hide
Query:  FLVEAL-HNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVRKTVEARFPTVSISIPAKQSADD
        FLV  L  NPR R+ +L++E +I  F+ +   Q   F+ FP  TSY R+  HRVA ++G+   V   G      +++ KT   R P    S   K   + 
Subjt:  FLVEAL-HNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVRKTVEARFPTVSISIPAKQSADD

Query:  KPGHVKIAIRPRPSKSSDDAGNCMAEQS--LGRSVEQRKEEYDNARARIFSSQ-GSNG
        +     I  R   S   DD    +  Q     +S+E+R+EEY   R RIF+ + G NG
Subjt:  KPGHVKIAIRPRPSKSSDDAGNCMAEQS--LGRSVEQRKEEYDNARARIFSSQ-GSNG

Arabidopsis top hitse value%identityAlignment
AT2G40960.1 Single-stranded nucleic acid binding R3H protein4.4e-6446.76Show/hide
Query:  LKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QVRILVRKTVEARFPTVSIS-
        + DK   VDPFLVEAL NPRHRLTILRMELD+QRFLQ+ +QQ  EFQHFPTSYLR AAHRVA HYGL T V+D G DG + RI+V K+ ++RFP   +S 
Subjt:  LKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QVRILVRKTVEARFPTVSIS-

Query:  IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRAEECRVNDVEKYTSI
        IP KQS   K  H+K+ I+PRP+K S   G+ + +  L +SVE+RKE+YD ARARIF+   +    D  S      ++ S +RD  +  +  ++E   + 
Subjt:  IPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRAEECRVNDVEKYTSI

Query:  KDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNI-----PPSFTGYHVPRNEVSL---VYMSPPPIKTVGLNQVSRTSA
            +  +SR+AI RDREKD  DPDYDRS  RY+ +LP++   ++  A F +Q +        F GY  P    SL    +    P  T GLNQ SR +A
Subjt:  KDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNI-----PPSFTGYHVPRNEVSL---VYMSPPPIKTVGLNQVSRTSA

Query:  -NAPWP-CAGMPYTH-------SAFQAPLYQQSLSFDYLR
            WP  A + YTH       S FQA  Y Q LSFDY++
Subjt:  -NAPWP-CAGMPYTH-------SAFQAPLYQQSLSFDYLR

AT3G10770.1 Single-stranded nucleic acid binding R3H protein3.2e-5950.64Show/hide
Query:  LKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QVRILVRKTVEARFPTVS
        + +K +MVDPFLVEAL NPRHRLTILRMELDIQ+F QN EQ   EF  FPTSYLRLAAHRVAQHYGL TM  DNG    DG   RILV KT E+RFP V 
Subjt:  LKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QVRILVRKTVEARFPTVS

Query:  IS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGN-CMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVD--LLSHAFTEGLDISPNRDRAEECRVNDV
        +S IP KQ  + +P   KIAI+PRP + S   G+    +Q+L RSVE+RKEEYD ARARIF+S  S+ S D   L     E  +   NR+   E  VN+ 
Subjt:  IS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGN-CMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVD--LLSHAFTEGLDISPNRDRAEECRVNDV

Query:  EKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLP---INLTPS-MNFAPFTVQNIPPSFTGY--HVPR-NEVSLVYMSP--PPIKTVGLN
              +D+G   +SRVAI RDREKD  DPDYDRSY+RYV       + + PS  +F+P  +    P   G+  H+PR ++ +L Y  P  P +     N
Subjt:  EKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLP---INLTPS-MNFAPFTVQNIPPSFTGY--HVPR-NEVSLVYMSP--PPIKTVGLN

Query:  QVSRTSANAPWP
          S T    PWP
Subjt:  QVSRTSANAPWP

AT3G10770.2 Single-stranded nucleic acid binding R3H protein1.7e-6050.97Show/hide
Query:  LKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QVRILVRKTVEARFPTVS
        + +K +MVDPFLVEAL NPRHRLTILRMELDIQ+F QN EQ   EF  FPTSYLRLAAHRVAQHYGL TM  DNG    DG   RILV KT E+RFP V 
Subjt:  LKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QVRILVRKTVEARFPTVS

Query:  IS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGN-CMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVD--LLSHAFTEGLDISPNRDRAEECRVNDV
        +S IP KQ  + +P   KIAI+PRP + S   G+    +Q+L RSVE+RKEEYD ARARIF+S  S+ S D   L     E  +   NR+   E  VN+ 
Subjt:  IS-IPAKQSADDKPGHVKIAIRPRPSKSSDDAGN-CMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVD--LLSHAFTEGLDISPNRDRAEECRVNDV

Query:  EKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGY--HVPR-NEVSLVYMSP--PPIKTVGLNQVSR
              +D+G   +SRVAI RDREKD  DPDYDRSY+RYV+ +P       +F+P  +    P   G+  H+PR ++ +L Y  P  P +     N  S 
Subjt:  EKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGY--HVPR-NEVSLVYMSP--PPIKTVGLNQVSR

Query:  TSANAPWP
        T    PWP
Subjt:  TSANAPWP

AT3G56680.1 Single-stranded nucleic acid binding R3H protein8.5e-6849.1Show/hide
Query:  VDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QVRILVRKTVEARFPTVSIS-IP-AKQS
        VDPFLVEALHN RHRLTILRMELD+QR LQN EQQ  EFQHFPTSYLRLAAHRVA HYGL T VQ++G DG + RILV KT E++FP V +S IP AKQS
Subjt:  VDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QVRILVRKTVEARFPTVSIS-IP-AKQS

Query:  ADDKPGHVKIAIRPRPSKSSD-DAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRD--RAEECRVNDVEKYTSIKDA
         + K    K++I+ RPSK S   AG+    +   RSVE+RKEEYD AR RIFS        D  S       + S +RD  +  +    +V+K  SI+++
Subjt:  ADDKPGHVKIAIRPRPSKSSD-DAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRD--RAEECRVNDVEKYTSIKDA

Query:  GNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPP-----SFTGYHVPRNEVSLVYMSPPPIKTVGLNQVSRTSANAPWPC
        G   +SRVAIFRDREKD  DPDYDR ++RY++SLP+N   + N  PF +Q IP       FTGY+   +  + +   P P   +     +  +    WP 
Subjt:  GNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPP-----SFTGYHVPRNEVSLVYMSPPPIKTVGLNQVSRTSANAPWPC

Query:  AGMPYTH-------SAFQAPLYQQSLSFDYLR
        A M Y H        + QA   QQ LSFDY++
Subjt:  AGMPYTH-------SAFQAPLYQQSLSFDYLR

AT5G05100.1 Single-stranded nucleic acid binding R3H protein4.0e-5746.89Show/hide
Query:  LKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDNGIDGQ-VRILVRKTVEARFPTVSIS
        + DK +MVDPFLVEAL NPRHRLTILRMELDIQ+F Q+ EQQ  EFQ  PTSYLRL AHRVAQHYGL  T ++  G+DG   RIL  KTVE+R+P V +S
Subjt:  LKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDNGIDGQ-VRILVRKTVEARFPTVSIS

Query:  -IPAKQ-SADDKPGHVKIAIRPRPSKSSDDAGN-CMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHA--------FTEGLDISPNRDRAE--
         IP KQ     +P   KIAI+PRP++ +  +G+    E++L RSVE+RKEEYD ARARIF+S  S+ S D  + A         ++     P+R+  E  
Subjt:  -IPAKQ-SADDKPGHVKIAIRPRPSKSSDDAGN-CMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHA--------FTEGLDISPNRDRAE--

Query:  ---ECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGL
                DVE+   I+D+G   +SRVAI RDREKD  DPDYDR+  RYV+  P    P  NF P  +           +PR + SL Y  P       L
Subjt:  ---ECRVNDVEKYTSIKDAGNLASSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGL

Query:  NQVSRTSANAPWPCAGMPYTHS
        N      +   WP A M Y  +
Subjt:  NQVSRTSANAPWPCAGMPYTHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTTCTTCAGCTTCCTCTATTGATGCCTTTCCAGATTGCCTCAAAGACAAAGTCTCAATGGTTGACCCCTTTTTGGTTGAGGCCCTTCACAACCCTCGTCACCG
TCTAACCATTCTGCGGATGGAACTCGATATTCAAAGGTTTTTGCAAAACCAAGAGCAGCAGGTGCTTGAGTTCCAACACTTCCCTACTTCGTATCTTCGACTCGCAGCTC
ATCGTGTTGCTCAACACTATGGTCTGCAAACTATGGTTCAGGATAATGGCATAGATGGACAGGTGAGGATTTTGGTGAGGAAAACTGTTGAAGCTAGATTCCCGACCGTT
TCTATCTCAATACCTGCGAAACAATCGGCTGATGATAAACCTGGGCACGTTAAAATTGCTATTAGGCCAAGGCCGAGTAAGTCATCTGATGATGCAGGTAATTGTATGGC
TGAGCAAAGTCTCGGTAGGAGTGTGGAGCAGAGGAAGGAAGAGTACGATAATGCACGTGCTCGAATATTCAGCAGCCAGGGCAGTAATGGTTCAGTGGATTTATTGTCCC
ATGCTTTCACTGAAGGGCTGGATATATCCCCTAACAGAGATAGGGCGGAAGAGTGTAGAGTGAACGATGTAGAGAAGTATACAAGTATCAAAGATGCCGGGAATTTGGCG
TCTTCTCGGGTTGCCATTTTTAGAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCGGAGTTATGAAAGGTATGTTAAGAGCCTTCCAATTAATCTGACTCCGAG
CATGAATTTTGCTCCTTTCACCGTGCAAAACATCCCACCTTCATTTACCGGTTACCATGTACCAAGGAACGAGGTTTCGTTGGTCTATATGTCTCCTCCCCCTATCAAAA
CTGTAGGATTGAATCAGGTATCTAGAACCTCAGCCAATGCGCCGTGGCCATGTGCAGGGATGCCGTACACACATTCTGCTTTCCAGGCTCCATTGTACCAACAGTCTTTG
AGTTTTGATTATCTGCGATACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTTCTTCAGCTTCCTCTATTGATGCCTTTCCAGATTGCCTCAAAGACAAAGTCTCAATGGTTGACCCCTTTTTGGTTGAGGCCCTTCACAACCCTCGTCACCG
TCTAACCATTCTGCGGATGGAACTCGATATTCAAAGGTTTTTGCAAAACCAAGAGCAGCAGGTGCTTGAGTTCCAACACTTCCCTACTTCGTATCTTCGACTCGCAGCTC
ATCGTGTTGCTCAACACTATGGTCTGCAAACTATGGTTCAGGATAATGGCATAGATGGACAGGTGAGGATTTTGGTGAGGAAAACTGTTGAAGCTAGATTCCCGACCGTT
TCTATCTCAATACCTGCGAAACAATCGGCTGATGATAAACCTGGGCACGTTAAAATTGCTATTAGGCCAAGGCCGAGTAAGTCATCTGATGATGCAGGTAATTGTATGGC
TGAGCAAAGTCTCGGTAGGAGTGTGGAGCAGAGGAAGGAAGAGTACGATAATGCACGTGCTCGAATATTCAGCAGCCAGGGCAGTAATGGTTCAGTGGATTTATTGTCCC
ATGCTTTCACTGAAGGGCTGGATATATCCCCTAACAGAGATAGGGCGGAAGAGTGTAGAGTGAACGATGTAGAGAAGTATACAAGTATCAAAGATGCCGGGAATTTGGCG
TCTTCTCGGGTTGCCATTTTTAGAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCGGAGTTATGAAAGGTATGTTAAGAGCCTTCCAATTAATCTGACTCCGAG
CATGAATTTTGCTCCTTTCACCGTGCAAAACATCCCACCTTCATTTACCGGTTACCATGTACCAAGGAACGAGGTTTCGTTGGTCTATATGTCTCCTCCCCCTATCAAAA
CTGTAGGATTGAATCAGGTATCTAGAACCTCAGCCAATGCGCCGTGGCCATGTGCAGGGATGCCGTACACACATTCTGCTTTCCAGGCTCCATTGTACCAACAGTCTTTG
AGTTTTGATTATCTGCGATACAATTGA
Protein sequenceShow/hide protein sequence
MDSSSASSIDAFPDCLKDKVSMVDPFLVEALHNPRHRLTILRMELDIQRFLQNQEQQVLEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQVRILVRKTVEARFPTV
SISIPAKQSADDKPGHVKIAIRPRPSKSSDDAGNCMAEQSLGRSVEQRKEEYDNARARIFSSQGSNGSVDLLSHAFTEGLDISPNRDRAEECRVNDVEKYTSIKDAGNLA
SSRVAIFRDREKDLSDPDYDRSYERYVKSLPINLTPSMNFAPFTVQNIPPSFTGYHVPRNEVSLVYMSPPPIKTVGLNQVSRTSANAPWPCAGMPYTHSAFQAPLYQQSL
SFDYLRYN