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HG10017611 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017611
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationChr03:16860825..16865186
RNA-Seq ExpressionHG10017611
SyntenyHG10017611
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033975.1 uncharacterized protein E6C27_scaffold400G00360 [Cucumis melo var. makuwa]5.5e-1355.56Show/hide
Query:  NDEDVETNDDDSLGELEDRCGQEEVPEFFNNIDMEVIDSMSDTGISKEINEPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVESNKK
        NDEDV+T D DS                        ID M + G+S+E+N PETL+KG+VFKSKVDLKNVVKSY IL HQHID VESNKK
Subjt:  NDEDVETNDDDSLGELEDRCGQEEVPEFFNNIDMEVIDSMSDTGISKEINEPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVESNKK
XP_038877923.1 uncharacterized protein LOC120070133 [Benincasa hispida]4.5e-0742.39Show/hide
Query:  NDEDVETNDDD-SLGELEDR-CGQEEVPEFFNNIDMEVIDSMSDTGISKEIN-EPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVESNK
        NDE+V+ +DDD  L +L  +  G  EVPE F  ID+  + +  D+   ++ N   ++L+KG++F SK+DLKNVV++Y I+RHQ+ +V+E  K
Subjt:  NDEDVETNDDD-SLGELEDR-CGQEEVPEFFNNIDMEVIDSMSDTGISKEIN-EPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVESNK
TrEMBL top hitse value%identityAlignment
A0A438IGJ8 Uncharacterized protein6.6e-0440.66Show/hide
Query:  MNDEDVETNDDDSLGELEDRCGQEEVPE-FFNNIDMEVIDSMSDTGISKEI---NEPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVE
        M D +   ND   LG      G+ +VP   F  ++ +VI+SM+D  ++      NE + L KG+ FKSKVDL+ VVK Y I R+QH+ V+E
Subjt:  MNDEDVETNDDDSLGELEDRCGQEEVPE-FFNNIDMEVIDSMSDTGISKEI---NEPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVE
A0A5D3BS46 DBD_Tnp_Mut domain-containing protein2.7e-1355.56Show/hide
Query:  NDEDVETNDDDSLGELEDRCGQEEVPEFFNNIDMEVIDSMSDTGISKEINEPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVESNKK
        NDEDV+T D DS                        ID M + G+S+E+N PETL+KG+VFKSKVDLKNVVKSY IL HQHID VESNKK
Subjt:  NDEDVETNDDDSLGELEDRCGQEEVPEFFNNIDMEVIDSMSDTGISKEINEPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVESNKK
A0A5D3D569 Uncharacterized protein6.6e-0439.56Show/hide
Query:  NDEDVETNDDDSLGE--LEDRCGQEEVPEFFNNIDMEVIDSMSDTGISKEINEPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVESNK
        N E  E +DDDS  +  L +  G  +VPE FN+ID+  ++S  D  + +E    E LM  ++F SK +LKN VK Y I++HQ  +V++  K
Subjt:  NDEDVETNDDDSLGE--LEDRCGQEEVPEFFNNIDMEVIDSMSDTGISKEINEPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVESNK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACGAAGATGTCGAAACAAATGATGATGACAGTTTAGGCGAACTAGAAGATCGATGTGGGCAAGAGGAAGTTCCTGAATTTTTTAACAACATAGACATGGAGGT
TATAGATTCTATGTCTGATACTGGCATTAGTAAAGAAATTAATGAGCCTGAAACATTGATGAAAGGTATTGTTTTTAAATCCAAGGTTGATTTGAAGAATGTAGTAAAAA
GTTATTTCATTCTTCGTCATCAACATATTGATGTTGTTGAGTCCAACAAGAAACCTCGACATCTGAACAAAGGTAATCCAGCTCAAGATGAGGATTATTTTGTTCAACGA
GAAGATGACCATGTCTATATGCCAACGTCTCAGCTGAACATGGAGTACAATATGAAACTCCATCGTTCACTACACAGAATCCACAATATGAACATAGGTCAATCCTCTTA
TAATCCATTTGGGTTTGATGATCAATATGTGACCTATCAATCACATGATAAAGGTATTGATGAAGGTCAAACATCAACTGTACGGGATTATAGTAATCGTGAGCGTTCTA
GGTGTGATCAAAGTGGATCATCTTCCACTAATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGACGAAGATGTCGAAACAAATGATGATGACAGTTTAGGCGAACTAGAAGATCGATGTGGGCAAGAGGAAGTTCCTGAATTTTTTAACAACATAGACATGGAGGT
TATAGATTCTATGTCTGATACTGGCATTAGTAAAGAAATTAATGAGCCTGAAACATTGATGAAAGGTATTGTTTTTAAATCCAAGGTTGATTTGAAGAATGTAGTAAAAA
GTTATTTCATTCTTCGTCATCAACATATTGATGTTGTTGAGTCCAACAAGAAACCTCGACATCTGAACAAAGGTAATCCAGCTCAAGATGAGGATTATTTTGTTCAACGA
GAAGATGACCATGTCTATATGCCAACGTCTCAGCTGAACATGGAGTACAATATGAAACTCCATCGTTCACTACACAGAATCCACAATATGAACATAGGTCAATCCTCTTA
TAATCCATTTGGGTTTGATGATCAATATGTGACCTATCAATCACATGATAAAGGTATTGATGAAGGTCAAACATCAACTGTACGGGATTATAGTAATCGTGAGCGTTCTA
GGTGTGATCAAAGTGGATCATCTTCCACTAATGAATAG
Protein sequenceShow/hide protein sequence
MNDEDVETNDDDSLGELEDRCGQEEVPEFFNNIDMEVIDSMSDTGISKEINEPETLMKGIVFKSKVDLKNVVKSYFILRHQHIDVVESNKKPRHLNKGNPAQDEDYFVQR
EDDHVYMPTSQLNMEYNMKLHRSLHRIHNMNIGQSSYNPFGFDDQYVTYQSHDKGIDEGQTSTVRDYSNRERSRCDQSGSSSTNE