CuGenDBv2

Gene ID	HG10017628
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	F-box domain-containing protein
Genome location	Chr03:17309468..17311243
RNA-Seq Expression	HG10017628
Synteny	HG10017628
Gene Ontology terms	GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily IPR045118 - F-box only protein FBXO9/FBXO48

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008449214.1 PREDICTED: probable F-box protein At5g04010 [Cucumis melo]

2.9e-127

83.97

Show/hide

Query:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT
        MAQP PS SS PPPWEV+LLVAER+DPKTLATASCVCKSWS++MASDHLWEPIFTANFPSL NLA  S+  +SPPVSFRRLFGLG+ AAARRRPA  KPT
Subjt:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT

Query:  LSLSDLVFVVSISSTDKDRYIFR-DGVKKEEKAP-PQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIE
        LSLSDLVFV+SIS TDKD+ I   DGV KEEKAP PQS LTVVKHG EL V+RNGLFKFDINL++      PVVIGAREEVEVVWN+VLEGW GVFTMIE
Subjt:  LSLSDLVFVVSISSTDKDRYIFR-DGVKKEEKAP-PQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIE

Query:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGS-KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV
        CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIV DL+LGLCGNG GS KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF ANV
Subjt:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGS-KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV

XP_022925168.1 probable F-box protein At5g04010 [Cucurbita moschata]

4.3e-115

78.95

Show/hide

Query:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT
        MAQ    P S PPPWEVLLLVAER+DP+TLATASCVCKSWSI+MAS++LWEPIF+A FPSL+NLA +SSA TSPPVSFRRLFGLGHTAAARRRPAPSKP 
Subjt:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT

Query:  LSLSDLVFVVSISSTDK-DRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGP-VVIGAREEVEVVWNLVLEGWAGVFTMIE
        LSLSDLVFV+S+S TDK +  I   G KKEEK  P+ + TVVKHG ELAVDRN LFKFDIN+     NG   VVIGA EEVEVVWN+VLEGW  VFTMIE
Subjt:  LSLSDLVFVVSISSTDK-DRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGP-VVIGAREEVEVVWNLVLEGWAGVFTMIE

Query:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRG---SKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF
        CGGRVGMAPRADGWFSEELPAAGCCP  VSGGIVADLKLG+C NG G    KVRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLF
Subjt:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRG---SKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF

XP_023518459.1 probable F-box protein At5g04010 [Cucurbita pepo subsp. pepo]

3.9e-116

79.23

Show/hide

Query:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT
        MAQ    P S PPPWEVLLLVAER+DP+TLATASCVCKSWSI+MAS++LWEPIF+A FPSL+NLA +SSA TSPPVSFRRLFGLGHTAAARRRPAPSKP 
Subjt:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT

Query:  LSLSDLVFVVSISSTDK-DRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIEC
        L LSDLVFV+S+SSTDK DR I   G KKEEK  P+ + TVVKHG ELAVDRNGLFKFDIN+ +   +   VVIGA EEV VVWN+VLEGW  VFTMIEC
Subjt:  LSLSDLVFVVSISSTDK-DRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIEC

Query:  GGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRG---SKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF
        GGRVGMAPRADGWFSEELPAAGCCP  VSGGIVADLKLG+C NG G    KVRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLF
Subjt:  GGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRG---SKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF

XP_031740421.1 probable F-box protein At5g04010 [Cucumis sativus]

2.6e-128

84.67

Show/hide

Query:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT
        MAQP PS SS PPPWEV+LLVAER+DPKTLATASCVCKSWS++MASDHLWEPIFTANFPSL NLA  ++ ATSP VSFRRLFGLG+ AAARRRPA SKP+
Subjt:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT

Query:  LSLSDLVFVVSISSTDKDR-YIFRDGVKKEEKAP-PQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIE
        LSLSDLVFV+SIS T+KDR  I  DGV KEEKAP PQS LT+VKHG EL VDRNGLFKFDINL +E G+G PVVIGAREEVEVVWN+VLEGW GVFTMIE
Subjt:  LSLSDLVFVVSISSTDKDR-YIFRDGVKKEEKAP-PQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIE

Query:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGS-KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV
        CGGRVGMAPRADGWFSEELPAAGCCPN VSGGIV DL+LGLCGNG GS KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF ANV
Subjt:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGS-KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV

XP_038883618.1 probable F-box protein At5g04010 [Benincasa hispida]

1.3e-135

88.11

Show/hide

Query:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT
        MA P PS SS PPPWEVLLLVAER+DPKTLATASCVCK WSI+MASDHLWEPIFTANFPSLSNLAISSSA TSPPVSFRRLFGLGHTAAARRRPAPSKPT
Subjt:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT

Query:  LSLSDLVFVVSISSTDKDRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGN-GGPVVIGAREEVEVVWNLVLEGWAGVFTMIEC
        LSLSDL+FV+SISSTDKDRYI    + +++KAPPQSILTVVKHG ELAVDRNGLFKFDINLD + GN GGPVVIG REEVEVVWNLVLEGW GVFTMIEC
Subjt:  LSLSDLVFVVSISSTDKDRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGN-GGPVVIGAREEVEVVWNLVLEGWAGVFTMIEC

Query:  GGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCG-NGRGSKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV
        GGRVGMAPRADGWFSEELPAAGCC N VSGGIVADLKLGL G NG GSKVRIESVSVGMMS+VSWRYVSLDDGLMYLQHFLF A+V
Subjt:  GGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCG-NGRGSKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDE5 F-box domain-containing protein

1.3e-128

84.67

Show/hide

Query:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT
        MAQP PS SS PPPWEV+LLVAER+DPKTLATASCVCKSWS++MASDHLWEPIFTANFPSL NLA  ++ ATSP VSFRRLFGLG+ AAARRRPA SKP+
Subjt:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT

Query:  LSLSDLVFVVSISSTDKDR-YIFRDGVKKEEKAP-PQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIE
        LSLSDLVFV+SIS T+KDR  I  DGV KEEKAP PQS LT+VKHG EL VDRNGLFKFDINL +E G+G PVVIGAREEVEVVWN+VLEGW GVFTMIE
Subjt:  LSLSDLVFVVSISSTDKDR-YIFRDGVKKEEKAP-PQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIE

Query:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGS-KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV
        CGGRVGMAPRADGWFSEELPAAGCCPN VSGGIV DL+LGLCGNG GS KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF ANV
Subjt:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGS-KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV

A0A1S3BLJ1 probable F-box protein At5g04010

1.4e-127

83.97

Show/hide

Query:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT
        MAQP PS SS PPPWEV+LLVAER+DPKTLATASCVCKSWS++MASDHLWEPIFTANFPSL NLA  S+  +SPPVSFRRLFGLG+ AAARRRPA  KPT
Subjt:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT

Query:  LSLSDLVFVVSISSTDKDRYIFR-DGVKKEEKAP-PQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIE
        LSLSDLVFV+SIS TDKD+ I   DGV KEEKAP PQS LTVVKHG EL V+RNGLFKFDINL++      PVVIGAREEVEVVWN+VLEGW GVFTMIE
Subjt:  LSLSDLVFVVSISSTDKDRYIFR-DGVKKEEKAP-PQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIE

Query:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGS-KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV
        CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIV DL+LGLCGNG GS KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF ANV
Subjt:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGS-KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV

A0A5D3DEJ6 Putative F-box protein

1.4e-127

83.97

Show/hide

Query:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT
        MAQP PS SS PPPWEV+LLVAER+DPKTLATASCVCKSWS++MASDHLWEPIFTANFPSL NLA  S+  +SPPVSFRRLFGLG+ AAARRRPA  KPT
Subjt:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT

Query:  LSLSDLVFVVSISSTDKDRYIFR-DGVKKEEKAP-PQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIE
        LSLSDLVFV+SIS TDKD+ I   DGV KEEKAP PQS LTVVKHG EL V+RNGLFKFDINL++      PVVIGAREEVEVVWN+VLEGW GVFTMIE
Subjt:  LSLSDLVFVVSISSTDKDRYIFR-DGVKKEEKAP-PQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIE

Query:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGS-KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV
        CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIV DL+LGLCGNG GS KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF ANV
Subjt:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGS-KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV

A0A6J1EEG3 probable F-box protein At5g04010

2.1e-115

78.95

Show/hide

Query:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT
        MAQ    P S PPPWEVLLLVAER+DP+TLATASCVCKSWSI+MAS++LWEPIF+A FPSL+NLA +SSA TSPPVSFRRLFGLGHTAAARRRPAPSKP 
Subjt:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT

Query:  LSLSDLVFVVSISSTDK-DRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGP-VVIGAREEVEVVWNLVLEGWAGVFTMIE
        LSLSDLVFV+S+S TDK +  I   G KKEEK  P+ + TVVKHG ELAVDRN LFKFDIN+     NG   VVIGA EEVEVVWN+VLEGW  VFTMIE
Subjt:  LSLSDLVFVVSISSTDK-DRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGP-VVIGAREEVEVVWNLVLEGWAGVFTMIE

Query:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRG---SKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF
        CGGRVGMAPRADGWFSEELPAAGCCP  VSGGIVADLKLG+C NG G    KVRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLF
Subjt:  CGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRG---SKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF

A0A6J1HMX9 probable F-box protein At5g04010

1.5e-113

77.46

Show/hide

Query:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT
        MAQ    P S PPPWEVLLLVAER+DP+TLATASCVCKSWSI+MAS+HLWEPIF+A FPSL+NLA +SSA  SPP+SF RLFGLGHTAAARRRPAPSKP 
Subjt:  MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPT

Query:  LSLSDLVFVVSISSTDK-DRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIEC
        LSLSDL+FV+S+S TDK D  I   G  KEEK  P+ + T+VKHG EL VDRNGLFKFDIN+   KG+   VVIGA  EVEVVWN+VLEGW  VFTMIEC
Subjt:  LSLSDLVFVVSISSTDK-DRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIEC

Query:  GGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGSK---VRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF
        GGRVGMAPRADGWFSEELPAAGCCP  VSGGIVADLKLG+C NG G K   VRIESVSVGMMSV+SWRYVSLDDGLMYLQHFLF
Subjt:  GGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVADLKLGLCGNGRGSK---VRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLF

SwissProt top hits

e value

%identity

Alignment

Q5EAF6 Probable F-box protein At5g04010

4.4e-22

29.89

Show/hide

Query:  PPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRR-PAPSKPTLSLSDLVFVV
        PP WE+L LV   +DP++LA ASCV  +WS   +S+ LW+ +  A   S+   AI+   A    +S++RL     +AA RRR   P++P +SLSDLVF+V
Subjt:  PPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRR-PAPSKPTLSLSDLVFVV

Query:  SISSTDKDRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIECGGRVGMAPRAD
         +S+  K+                     VVK G++L    N  F+ + ++ D             ++V + WN+VL  +  +F M E    +       
Subjt:  SISSTDKDRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIECGGRVGMAPRAD

Query:  GWFSEELPAAGCCPNAVSGG--IVADLKLGLCGNGRGSKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL
        GWF++ELP      N    G  +V ++K         ++  ++ V   +    +W+ + +DD L YLQ FL
Subjt:  GWFSEELPAAGCCPNAVSGG--IVADLKLGLCGNGRGSKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL

Arabidopsis top hits

e value

%identity

Alignment

AT5G04010.1 F-box family protein

3.2e-23

29.89

Show/hide

Query:  PPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRR-PAPSKPTLSLSDLVFVV
        PP WE+L LV   +DP++LA ASCV  +WS   +S+ LW+ +  A   S+   AI+   A    +S++RL     +AA RRR   P++P +SLSDLVF+V
Subjt:  PPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRR-PAPSKPTLSLSDLVFVV

Query:  SISSTDKDRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIECGGRVGMAPRAD
         +S+  K+                     VVK G++L    N  F+ + ++ D             ++V + WN+VL  +  +F M E    +       
Subjt:  SISSTDKDRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIECGGRVGMAPRAD

Query:  GWFSEELPAAGCCPNAVSGG--IVADLKLGLCGNGRGSKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL
        GWF++ELP      N    G  +V ++K         ++  ++ V   +    +W+ + +DD L YLQ FL
Subjt:  GWFSEELPAAGCCPNAVSGG--IVADLKLGLCGNGRGSKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCACAACCTTTTCCATCTCCTTCCTCACCGCCGCCGCCGTGGGAGGTGCTTCTTCTCGTTGCCGAACGCGTGGACCCCAAAACCCTGGCCACCGCCTCCTGCGTCTG
CAAGTCATGGTCCATTGCCATGGCCTCCGACCACCTTTGGGAGCCCATTTTCACGGCCAATTTCCCTTCTCTCTCTAACCTTGCTATCTCCTCCTCCGCCGCCACGTCCC
CACCTGTGTCCTTCCGCCGCCTCTTTGGTCTCGGCCACACTGCTGCCGCTCGTCGCCGTCCTGCTCCCTCGAAACCCACTCTTTCCCTCTCCGACCTTGTCTTCGTCGTC
AGTATTTCATCCACCGATAAAGATAGGTACATCTTCAGAGACGGAGTGAAGAAAGAAGAAAAAGCTCCGCCCCAATCCATCCTCACCGTCGTGAAGCACGGCAGGGAGCT
AGCCGTGGATCGAAACGGGCTATTCAAATTCGACATAAATCTCGACGACGAAAAGGGCAATGGCGGTCCGGTGGTGATCGGAGCTAGAGAGGAGGTGGAGGTGGTGTGGA
ACCTAGTGTTAGAAGGGTGGGCGGGGGTGTTTACAATGATTGAATGTGGAGGAAGAGTGGGAATGGCTCCGAGAGCCGACGGGTGGTTCTCGGAGGAGCTCCCGGCGGCA
GGGTGCTGCCCGAACGCCGTGAGCGGCGGCATAGTGGCGGATCTGAAACTGGGGTTGTGTGGAAATGGAAGAGGGAGTAAGGTTAGGATTGAAAGTGTGAGTGTGGGGAT
GATGAGTGTTGTGAGTTGGAGATATGTGAGTTTGGATGATGGGTTAATGTATTTGCAACATTTTTTGTTCAAAGCAAATGTCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAQPFPSPSSPPPPWEVLLLVAERVDPKTLATASCVCKSWSIAMASDHLWEPIFTANFPSLSNLAISSSAATSPPVSFRRLFGLGHTAAARRRPAPSKPTLSLSDLVFVV
SISSTDKDRYIFRDGVKKEEKAPPQSILTVVKHGRELAVDRNGLFKFDINLDDEKGNGGPVVIGAREEVEVVWNLVLEGWAGVFTMIECGGRVGMAPRADGWFSEELPAA
GCCPNAVSGGIVADLKLGLCGNGRGSKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFKANV

HG10017628 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome