; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017643 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017643
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
Genome locationChr03:17722152..17723877
RNA-Seq ExpressionHG10017643
SyntenyHG10017643
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034595.1 DExH-box ATP-dependent RNA helicase DExH5 [Cucumis melo var. makuwa]1.2e-2755.63Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+K D  +  K+       D L         K  E+N+GGYD   K
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK

Query:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE
        NFLS+QS+KAIDSLRKEFFSLL+D GLV+GY +TYNAWSLDE
Subjt:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE

TYK09146.1 DExH-box ATP-dependent RNA helicase DExH5 [Cucumis melo var. makuwa]1.2e-2755.63Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+K D  +  K+       D L         K  E+N+GGYD   K
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK

Query:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE
        NFLS+QS+KAIDSLRKEFFSLL+D GLV+GY +TYNAWSLDE
Subjt:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE

XP_008446652.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1 [Cucumis melo]1.2e-2755.63Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+K D  +  K+       D L         K  E+N+GGYD   K
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK

Query:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE
        NFLS+QS+KAIDSLRKEFFSLL+D GLV+GY +TYNAWSLDE
Subjt:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE

XP_008446653.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X2 [Cucumis melo]1.2e-2755.63Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+K D  +  K+       D L         K  E+N+GGYD   K
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK

Query:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE
        NFLS+QS+KAIDSLRKEFFSLL+D GLV+GY +TYNAWSLDE
Subjt:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE

XP_038892223.1 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial [Benincasa hispida]1.4e-2857.75Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+K DV +  K+       D L         K  E+NFGGYD   K
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK

Query:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE
        NFLSVQS+KAIDSLRKEFFSLL+D GLV+GY +TYNAWSLDE
Subjt:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE

TrEMBL top hitse value%identityAlignment
A0A0A0KWI1 Uncharacterized protein9.7e-2854.93Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK
        D S NL VLG YLTMLPME                 PI+TVVA L+VRD FLTPL+K D  +  K+       D L         K  E+N+GGYD   K
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK

Query:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE
        NFLS+QS+KAIDSLRKEFFSLL+D GLV+GY +TYNAWSLDE
Subjt:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE

A0A1S3BF36 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X15.7e-2855.63Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+K D  +  K+       D L         K  E+N+GGYD   K
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK

Query:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE
        NFLS+QS+KAIDSLRKEFFSLL+D GLV+GY +TYNAWSLDE
Subjt:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE

A0A1S3BFL6 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X25.7e-2855.63Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+K D  +  K+       D L         K  E+N+GGYD   K
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK

Query:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE
        NFLS+QS+KAIDSLRKEFFSLL+D GLV+GY +TYNAWSLDE
Subjt:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE

A0A5A7SZF7 DExH-box ATP-dependent RNA helicase DExH55.7e-2855.63Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+K D  +  K+       D L         K  E+N+GGYD   K
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK

Query:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE
        NFLS+QS+KAIDSLRKEFFSLL+D GLV+GY +TYNAWSLDE
Subjt:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE

A0A5D3CFK3 DExH-box ATP-dependent RNA helicase DExH55.7e-2855.63Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK
        D S NL VLG YLTMLPME                 PILTVVA L+VRD FLTPL+K D  +  K+       D L         K  E+N+GGYD   K
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLK

Query:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE
        NFLS+QS+KAIDSLRKEFFSLL+D GLV+GY +TYNAWSLDE
Subjt:  NFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDE

SwissProt top hitse value%identityAlignment
F4HYJ7 DExH-box ATP-dependent RNA helicase DExH31.4e-1237.5Show/hide
Query:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKAIDSLR---------------
        VQN V  L+     D   NL  LG  L+MLP+E                 P++TVVA L+VRD FL P  K D+ +  ++  S R               
Subjt:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKAIDSLR---------------

Query:  KVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVN
        K  E+   GYD   KNFLS Q++KA+DS+RK+FF+LLK+  L++
Subjt:  KVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVN

F4IM84 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial1.4e-1536.56Show/hide
Query:  RLKALENANVKEWVQESFQDQMVIQSNVQEHVAVLQEHQGNPYRVQNQVVMLQEHQDRSTNLNVLGCYLTMLPME-----------------PILTVVAR
        ++K+L   ++ E++  + Q   ++   VQ+ +A L+            +  L E++D    L  LG YL+ LPME                 PILTV A 
Subjt:  RLKALENANVKEWVQESFQDQMVIQSNVQEHVAVLQEHQGNPYRVQNQVVMLQEHQDRSTNLNVLGCYLTMLPME-----------------PILTVVAR

Query:  LNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVNG
        L+VRD FLTP  K D+ +  K+       D L         K  E+    YD   KNFLS+QS++AIDSLRKEFFSLLKD GL++G
Subjt:  LNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVNG

Arabidopsis top hitse value%identityAlignment
AT1G48650.1 DEA(D/H)-box RNA helicase family protein1.0e-1337.5Show/hide
Query:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKAIDSLR---------------
        VQN V  L+     D   NL  LG  L+MLP+E                 P++TVVA L+VRD FL P  K D+ +  ++  S R               
Subjt:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKAIDSLR---------------

Query:  KVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVN
        K  E+   GYD   KNFLS Q++KA+DS+RK+FF+LLK+  L++
Subjt:  KVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVN

AT1G48650.2 DEA(D/H)-box RNA helicase family protein1.0e-1337.5Show/hide
Query:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKAIDSLR---------------
        VQN V  L+     D   NL  LG  L+MLP+E                 P++TVVA L+VRD FL P  K D+ +  ++  S R               
Subjt:  VQNQVVMLQ--EHQDRSTNLNVLGCYLTMLPME-----------------PILTVVARLNVRDSFLTPLKKNDVLQPVKAIDSLR---------------

Query:  KVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVN
        K  E+   GYD   KNFLS Q++KA+DS+RK+FF+LLK+  L++
Subjt:  KVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVN

AT2G01130.1 DEA(D/H)-box RNA helicase family protein9.9e-1736.56Show/hide
Query:  RLKALENANVKEWVQESFQDQMVIQSNVQEHVAVLQEHQGNPYRVQNQVVMLQEHQDRSTNLNVLGCYLTMLPME-----------------PILTVVAR
        ++K+L   ++ E++  + Q   ++   VQ+ +A L+            +  L E++D    L  LG YL+ LPME                 PILTV A 
Subjt:  RLKALENANVKEWVQESFQDQMVIQSNVQEHVAVLQEHQGNPYRVQNQVVMLQEHQDRSTNLNVLGCYLTMLPME-----------------PILTVVAR

Query:  LNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVNG
        L+VRD FLTP  K D+ +  K+       D L         K  E+    YD   KNFLS+QS++AIDSLRKEFFSLLKD GL++G
Subjt:  LNVRDSFLTPLKKNDVLQPVKA------IDSLR--------KVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVNG

AT2G35920.1 RNA helicase family protein8.7e-0531.19Show/hide
Query:  MEPILTVVARLNVRDSFLTPLKKNDVLQPVK---AIDSLRKVVE--KNFGGY----------DIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVN-GYL
        + P LT+ A L  R  F+ PL + +     K   A DS    +   K + GY          D   +NFLS  +++ ++ +R +F  LL DIG V+    
Subjt:  MEPILTVVARLNVRDSFLTPLKKNDVLQPVK---AIDSLRKVVE--KNFGGY----------DIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVN-GYL

Query:  NTYNAWSLD
        N YN +S D
Subjt:  NTYNAWSLD

AT5G04895.1 DEA(D/H)-box RNA helicase family protein4.0e-1033.57Show/hide
Query:  DRSTNLNVLGCYLTMLPM-----------------EPILTVVARLNVRDSFLTPLKKNDVLQPVKAIDSLR---------------KVVEKNFGGYDIYL
        D   NL  LG  L++LP+                 +PILT+V+ L+VRD FL P  K D+    K   S +               K  E+    Y+   
Subjt:  DRSTNLNVLGCYLTMLPM-----------------EPILTVVARLNVRDSFLTPLKKNDVLQPVKAIDSLR---------------KVVEKNFGGYDIYL

Query:  KNFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWS
        +NFLS Q+++AI SLRK+F  +LK+ GLV+  L   N  S
Subjt:  KNFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGAGAAAAACCCCAAAAATACCGAACCAACTCTCTCGGATGCGGAAGCATCTTTCTCCCCACCAGCAGTCGAGCAGCGGCTTAAGGCATTAGAAAATGCTAATGT
CAAAGAATGGGTTCAAGAATCGTTTCAAGATCAAATGGTCATTCAATCAAATGTTCAAGAACATGTTGCTGTCCTTCAAGAACATCAAGGCAACCCATATCGAGTCCAAA
ATCAAGTGGTCATGTTGCAAGAACATCAAGATAGGAGTACAAATCTTAATGTTTTAGGTTGTTATTTGACTATGCTCCCAATGGAACCAATTTTGACCGTTGTTGCCCGT
CTTAATGTGAGAGACTCTTTTCTAACACCACTAAAGAAGAATGATGTTTTACAACCAGTGAAGGCTATTGATTCACTAAGGAAAGTTGTTGAGAAGAACTTTGGTGGATA
TGACATCTATTTGAAGAACTTTCTTTCTGTACAATCAGTGAAAGCTATTGATTCACTAAGGAAGGAGTTCTTTTCTTTGCTTAAAGATATTGGCTTGGTCAATGGGTATT
TGAACACCTACAATGCTTGGAGTCTTGATGAACTTGATGAAAATTTTGTATCTTGGAGTGTTTTTCATAATATTTTTGTTCAAGATGTAGGAGGACACTCTGGAATGCCT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGAGAAAAACCCCAAAAATACCGAACCAACTCTCTCGGATGCGGAAGCATCTTTCTCCCCACCAGCAGTCGAGCAGCGGCTTAAGGCATTAGAAAATGCTAATGT
CAAAGAATGGGTTCAAGAATCGTTTCAAGATCAAATGGTCATTCAATCAAATGTTCAAGAACATGTTGCTGTCCTTCAAGAACATCAAGGCAACCCATATCGAGTCCAAA
ATCAAGTGGTCATGTTGCAAGAACATCAAGATAGGAGTACAAATCTTAATGTTTTAGGTTGTTATTTGACTATGCTCCCAATGGAACCAATTTTGACCGTTGTTGCCCGT
CTTAATGTGAGAGACTCTTTTCTAACACCACTAAAGAAGAATGATGTTTTACAACCAGTGAAGGCTATTGATTCACTAAGGAAAGTTGTTGAGAAGAACTTTGGTGGATA
TGACATCTATTTGAAGAACTTTCTTTCTGTACAATCAGTGAAAGCTATTGATTCACTAAGGAAGGAGTTCTTTTCTTTGCTTAAAGATATTGGCTTGGTCAATGGGTATT
TGAACACCTACAATGCTTGGAGTCTTGATGAACTTGATGAAAATTTTGTATCTTGGAGTGTTTTTCATAATATTTTTGTTCAAGATGTAGGAGGACACTCTGGAATGCCT
TAA
Protein sequenceShow/hide protein sequence
MGEKNPKNTEPTLSDAEASFSPPAVEQRLKALENANVKEWVQESFQDQMVIQSNVQEHVAVLQEHQGNPYRVQNQVVMLQEHQDRSTNLNVLGCYLTMLPMEPILTVVAR
LNVRDSFLTPLKKNDVLQPVKAIDSLRKVVEKNFGGYDIYLKNFLSVQSVKAIDSLRKEFFSLLKDIGLVNGYLNTYNAWSLDELDENFVSWSVFHNIFVQDVGGHSGMP