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HG10017660 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017660
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase
Genome locationChr03:18021891..18022244
RNA-Seq ExpressionHG10017660
SyntenyHG10017660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.2e-1048.28Show/hide
Query:  RKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINIGKE
        RKRKA  REA             V +  + ++FSE EA  +   +NDALV+TL IANAKVHRIL+DGGS  D+ SL A+ A+++G+E
Subjt:  RKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINIGKE

XP_022148331.1 uncharacterized protein LOC111017012 [Momordica charantia]4.8e-1245.87Show/hide
Query:  LKKIPKQPERLEQYSEGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSL
        L KI      +   S G  GGE  RKRK +AR+A      H+  +        TL F+  EA+VLHQ +NDALV+TL IAN +VHRIL+DGGS   VL+L
Subjt:  LKKIPKQPERLEQYSEGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSL

Query:  AAFSAINIG
          F  + IG
Subjt:  AAFSAINIG

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]2.6e-1043.4Show/hide
Query:  KQPER-LEQYSEGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFS
        K P R +     G    E  RKRKA  RE       H      V +    ++FSE+EA  L   +ND LV+TL IANAKVHRIL+DGGS  D++SL A+ 
Subjt:  KQPER-LEQYSEGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFS

Query:  AINIGK
        A+++G+
Subjt:  AINIGK

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]8.2e-1245.83Show/hide
Query:  EGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINIGKE
        EG    E  RKRKA  REA    + +      +    +T++FSENEA  L   +NDALV+TL IAN KVHRIL+DGGS  D++S  A+ A+++G++
Subjt:  EGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINIGKE

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]4.5e-1045.35Show/hide
Query:  IVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINI
        I  K+KA  REA    E +      + +  +T++FSE+EA  L   +NDALV+TL IAN KVHRIL+DGGS  D++S  A+ A+++
Subjt:  IVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINI

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159015.7e-1148.28Show/hide
Query:  RKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINIGKE
        RKRKA  REA             V +  + ++FSE EA  +   +NDALV+TL IANAKVHRIL+DGGS  D+ SL A+ A+++G+E
Subjt:  RKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINIGKE

A0A6J1D520 uncharacterized protein LOC1110170122.3e-1245.87Show/hide
Query:  LKKIPKQPERLEQYSEGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSL
        L KI      +   S G  GGE  RKRK +AR+A      H+  +        TL F+  EA+VLHQ +NDALV+TL IAN +VHRIL+DGGS   VL+L
Subjt:  LKKIPKQPERLEQYSEGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSL

Query:  AAFSAINIG
          F  + IG
Subjt:  AAFSAINIG

A0A6J1D8C9 uncharacterized protein LOC1110183001.3e-1043.4Show/hide
Query:  KQPER-LEQYSEGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFS
        K P R +     G    E  RKRKA  RE       H      V +    ++FSE+EA  L   +ND LV+TL IANAKVHRIL+DGGS  D++SL A+ 
Subjt:  KQPER-LEQYSEGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFS

Query:  AINIGK
        A+++G+
Subjt:  AINIGK

A0A6J1DKR9 uncharacterized protein LOC1110214382.2e-1046.67Show/hide
Query:  EIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINIGKE
        E  RKRKA  REA    E        V +    ++FS++    L   +NDAL++TL IANAKVHRIL+DGGS  D +SL A+ A+++GKE
Subjt:  EIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINIGKE

A0A6J1DQY2 uncharacterized protein LOC1110223214.0e-1245.83Show/hide
Query:  EGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINIGKE
        EG    E  RKRKA  REA    + +      +    +T++FSENEA  L   +NDALV+TL IAN KVHRIL+DGGS  D++S  A+ A+++G++
Subjt:  EGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFSAINIGKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAGAATCAAACTGAAAAAGATTCCTAAACAACCAGAGAGATTAGAACAATATTCGGAGGGGGCAACTGGAGGAGAAATAGTTCGAAAAAGAAAAGCCAAAGC
ACGAGAAGCATGGCACGAACCAGAGATTCACAGTACTTCCTCATTGCAAGTGGTCGAGGGTGGCTTAACTCTACAATTCTCTGAAAATGAAGCCAGAGTTCTTCATCAAC
TATACAACGATGCTCTAGTCGTAACTTTAACAATAGCCAACGCAAAAGTGCACCGCATCTTGATTGATGGAGGAAGCTTTGTAGACGTATTATCCCTCGCCGCCTTTAGT
GCCATAAATATAGGAAAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAGAATCAAACTGAAAAAGATTCCTAAACAACCAGAGAGATTAGAACAATATTCGGAGGGGGCAACTGGAGGAGAAATAGTTCGAAAAAGAAAAGCCAAAGC
ACGAGAAGCATGGCACGAACCAGAGATTCACAGTACTTCCTCATTGCAAGTGGTCGAGGGTGGCTTAACTCTACAATTCTCTGAAAATGAAGCCAGAGTTCTTCATCAAC
TATACAACGATGCTCTAGTCGTAACTTTAACAATAGCCAACGCAAAAGTGCACCGCATCTTGATTGATGGAGGAAGCTTTGTAGACGTATTATCCCTCGCCGCCTTTAGT
GCCATAAATATAGGAAAGGAATAA
Protein sequenceShow/hide protein sequence
MTNRIKLKKIPKQPERLEQYSEGATGGEIVRKRKAKAREAWHEPEIHSTSSLQVVEGGLTLQFSENEARVLHQLYNDALVVTLTIANAKVHRILIDGGSFVDVLSLAAFS
AINIGKE