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HG10017665 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017665
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionThreonine-tRNA ligase
Genome locationChr03:18114154..18117826
RNA-Seq ExpressionHG10017665
SyntenyHG10017665
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595681.1 hypothetical protein SDJN03_12234, partial [Cucurbita argyrosperma subsp. sororia]3.3e-3478.5Show/hide
Query:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL
        MAEPL GG+HDLEQTLKPF++RASEAEDRLSRLEAALLSKKD H+EEHLKTISELQSKLDSANEALIA++KK          AEMVA ENAKL+YRI+HL
Subjt:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL

Query:  VRTARET
        VR AR T
Subjt:  VRTARET
XP_008464609.1 PREDICTED: uncharacterized protein LOC103502450 isoform X2 [Cucumis melo]1.0e-3582.24Show/hide
Query:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL
        MAEP GGGNHDLEQTLKPFFQRAS+AEDRLSRLEAALLSKKD HNEEHLKTISELQ+KLDSAN ALI +RKK          AEMVA ENAKL+YRIIHL
Subjt:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL

Query:  VRTARET
        VRTARET
Subjt:  VRTARET
XP_022153876.1 uncharacterized protein LOC111021288 [Momordica charantia]1.0e-3578.76Show/hide
Query:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL
        MAEPL GG HDLEQ+LKPFFQRASEAEDRLSRLEA LLSKKD  +EEHLKTI+ELQSKLDSANEALIA+RKK          AE+VA ENAKL+YRIIHL
Subjt:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL

Query:  VRTARETRQKLEQ
        VRTARE  QKLEQ
Subjt:  VRTARETRQKLEQ
XP_022925102.1 uncharacterized protein LOC111432443 [Cucurbita moschata]1.1e-3478.7Show/hide
Query:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL
        MAEPL GG+HDLEQTLKPF++RASEAEDRLSRLEAALLSKKD H+EEHLKTISELQSKLDSANEALIA++KK          AEMVA ENAKL+YRI+HL
Subjt:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL

Query:  VRTARETR
        VR AR TR
Subjt:  VRTARETR
XP_022966502.1 uncharacterized protein LOC111466136 [Cucurbita maxima]1.1e-3479.44Show/hide
Query:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL
        MAEPL GG+HDLEQTLKPF+QRASEAEDRLSRLEAALLSKKD H+EEHLKTISELQSKLDSANEALIA++KK          AEMVA ENAKL+YRI+HL
Subjt:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL

Query:  VRTARET
        VR AR T
Subjt:  VRTARET
TrEMBL top hitse value%identityAlignment
A0A1S3CLW0 uncharacterized protein LOC103502450 isoform X25.0e-3682.24Show/hide
Query:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL
        MAEP GGGNHDLEQTLKPFFQRAS+AEDRLSRLEAALLSKKD HNEEHLKTISELQ+KLDSAN ALI +RKK          AEMVA ENAKL+YRIIHL
Subjt:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL

Query:  VRTARET
        VRTARET
Subjt:  VRTARET
A0A1S3CM07 uncharacterized protein LOC103502450 isoform X12.4e-3090Show/hide
Query:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPC
        MAEP GGGNHDLEQTLKPFFQRAS+AEDRLSRLEAALLSKKD HNEEHLKTISELQ+KLDSAN ALI +RKKASI GAPC
Subjt:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPC
A0A6J1DM00 uncharacterized protein LOC1110212885.0e-3678.76Show/hide
Query:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL
        MAEPL GG HDLEQ+LKPFFQRASEAEDRLSRLEA LLSKKD  +EEHLKTI+ELQSKLDSANEALIA+RKK          AE+VA ENAKL+YRIIHL
Subjt:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL

Query:  VRTARETRQKLEQ
        VRTARE  QKLEQ
Subjt:  VRTARETRQKLEQ
A0A6J1EAW7 uncharacterized protein LOC1114324435.5e-3578.7Show/hide
Query:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL
        MAEPL GG+HDLEQTLKPF++RASEAEDRLSRLEAALLSKKD H+EEHLKTISELQSKLDSANEALIA++KK          AEMVA ENAKL+YRI+HL
Subjt:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL

Query:  VRTARETR
        VR AR TR
Subjt:  VRTARETR
A0A6J1HN54 uncharacterized protein LOC1114661365.5e-3579.44Show/hide
Query:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL
        MAEPL GG+HDLEQTLKPF+QRASEAEDRLSRLEAALLSKKD H+EEHLKTISELQSKLDSANEALIA++KK          AEMVA ENAKL+YRI+HL
Subjt:  MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHL

Query:  VRTARET
        VR AR T
Subjt:  VRTARET
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G57320.1 unknown protein1.2e-1341.51Show/hide
Query:  NHDLEQTLKPFFQRASEAEDRLSRLEAALLS-KKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHLVRTARET
        +H L + LKPFF RA+EA++RL++LEAAL S K D+ + + ++   +LQSKL+ AN  +  ++ K           + + +ENAK +YRI+HLVR  ++ 
Subjt:  NHDLEQTLKPFFQRASEAEDRLSRLEAALLS-KKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHLVRTARET

Query:  RQKLEQ
         QKLE+
Subjt:  RQKLEQ
AT3G57320.2 unknown protein1.7e-0744.62Show/hide
Query:  NHDLEQTLKPFFQRASEAEDRLSRLEAALLS-KKDVHNEEHLKTISELQSKLDSANEALIAQRKK
        +H L + LKPFF RA+EA++RL++LEAAL S K D+ + + ++   +LQSKL+ AN  +  ++ K
Subjt:  NHDLEQTLKPFFQRASEAEDRLSRLEAALLS-KKDVHNEEHLKTISELQSKLDSANEALIAQRKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAACCACTTGGCGGAGGCAACCACGATCTCGAGCAGACCTTGAAGCCCTTCTTTCAAAGAGCTTCTGAAGCCGAGGATCGTTTGTCAAGATTAGAAGCTGCACT
CTTGAGTAAGAAAGATGTCCATAACGAAGAACATCTGAAAACGATCAGTGAACTCCAGTCGAAGCTAGACAGCGCAAATGAAGCACTAATCGCACAACGGAAAAAGGCAA
GTATATTTGGTGCACCATGTTGTAATGCTGAGATGGTTGCTGTAGAAAATGCTAAGCTTGAGTATCGCATAATCCATCTTGTGAGGACAGCTAGGGAAACCCGTCAAAAG
TTGGAGCAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAACCACTTGGCGGAGGCAACCACGATCTCGAGCAGACCTTGAAGCCCTTCTTTCAAAGAGCTTCTGAAGCCGAGGATCGTTTGTCAAGATTAGAAGCTGCACT
CTTGAGTAAGAAAGATGTCCATAACGAAGAACATCTGAAAACGATCAGTGAACTCCAGTCGAAGCTAGACAGCGCAAATGAAGCACTAATCGCACAACGGAAAAAGGCAA
GTATATTTGGTGCACCATGTTGTAATGCTGAGATGGTTGCTGTAGAAAATGCTAAGCTTGAGTATCGCATAATCCATCTTGTGAGGACAGCTAGGGAAACCCGTCAAAAG
TTGGAGCAAGAATGA
Protein sequenceShow/hide protein sequence
MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKASIFGAPCCNAEMVAVENAKLEYRIIHLVRTARETRQK
LEQE