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HG10017669 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017669
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionEn/Spm-like transposon protein
Genome locationChr03:18147958..18149835
RNA-Seq ExpressionHG10017669
SyntenyHG10017669
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032202.1 uncharacterized protein E6C27_scaffold219G00130 [Cucumis melo var. makuwa]2.0e-1060.94Show/hide
Query:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
        +N VQ S    D K  RNEEFNND+IL+GRP+S G  +T SD++L LAHQYVLFN   V+PYIE
Subjt:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
KAA0041270.1 putative TNP2-like transposon protein [Cucumis melo var. makuwa]2.0e-1060.94Show/hide
Query:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
        +N VQ S    D K  RNEEFNND+IL+GRP+S G  +T SD++L LAHQYVLFN   V+PYIE
Subjt:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
KAA0053955.1 uncharacterized protein E6C27_scaffold11091G00010 [Cucumis melo var. makuwa]2.0e-1060.94Show/hide
Query:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
        +N VQ S    D K  RNEEFNND+IL+GRP+S G  +T SD++L LAHQYVLFN   V+PYIE
Subjt:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
TYK05234.1 uncharacterized protein E5676_scaffold108G00430 [Cucumis melo var. makuwa]2.0e-1060.94Show/hide
Query:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
        +N VQ S    D K  RNEEFNND+IL+GRP+S G  +T SD++L LAHQYVLFN   V+PYIE
Subjt:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
TYK28559.1 uncharacterized protein E5676_scaffold629G002060 [Cucumis melo var. makuwa]2.0e-1060.94Show/hide
Query:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
        +N VQ S    D K  RNEEFNND+IL+GRP+S G  +T SD++L LAHQYVLFN   V+PYIE
Subjt:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
TrEMBL top hitse value%identityAlignment
A0A5A7SME3 Uncharacterized protein9.8e-1160.94Show/hide
Query:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
        +N VQ S    D K  RNEEFNND+IL+GRP+S G  +T SD++L LAHQYVLFN   V+PYIE
Subjt:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
A0A5A7TD89 Putative TNP2-like transposon protein9.8e-1160.94Show/hide
Query:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
        +N VQ S    D K  RNEEFNND+IL+GRP+S G  +T SD++L LAHQYVLFN   V+PYIE
Subjt:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
A0A5A7U726 Uncharacterized protein9.8e-1160.94Show/hide
Query:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
        +N VQ S    D K  RNEEFNND+IL+GRP+S G  +T SD++L LAHQYVLFN   V+PYIE
Subjt:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
A0A5A7UJS5 DUF4218 domain-containing protein9.8e-1160.94Show/hide
Query:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
        +N VQ S    D K  RNEEFNND+IL+GRP+S G  +T SD++L LAHQYVLFN   V+PYIE
Subjt:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
A0A5D3C1T0 Uncharacterized protein9.8e-1160.94Show/hide
Query:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
        +N VQ S    D K  RNEEFNND+IL+GRP+S G  +T SD++L LAHQYVLFN   V+PYIE
Subjt:  QNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIVEVKPYIE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGAAGATGATATCTCCGGAACTATCCTGTTATCGGGAATTTCGAGACCCCGTTCCTGTAGGAGGTTTCCTACACTCCCATCAGTACTGGCTGTCCAGCAAATGCA
GAGTCTCTCGCTTCAGGCTTTCATCGTGGCTTCGTTCTATGTAGGAAACCAGAATCGTGTTCAAGATTCAATAATTGGATTTGATATCAAAGTTGTTCGAAATGAGGAGT
TCAACAATGATGTTATTCTTAAAGGTCGTCCTCTATCATATGGATTATCAGTTACATTCTCTGATGACATACTCGAACTAGCACATCAATATGTGTTGTTTAACATAGTT
GAGGTGAAACCATATATCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGAAGATGATATCTCCGGAACTATCCTGTTATCGGGAATTTCGAGACCCCGTTCCTGTAGGAGGTTTCCTACACTCCCATCAGTACTGGCTGTCCAGCAAATGCA
GAGTCTCTCGCTTCAGGCTTTCATCGTGGCTTCGTTCTATGTAGGAAACCAGAATCGTGTTCAAGATTCAATAATTGGATTTGATATCAAAGTTGTTCGAAATGAGGAGT
TCAACAATGATGTTATTCTTAAAGGTCGTCCTCTATCATATGGATTATCAGTTACATTCTCTGATGACATACTCGAACTAGCACATCAATATGTGTTGTTTAACATAGTT
GAGGTGAAACCATATATCGAATGA
Protein sequenceShow/hide protein sequence
MSEDDISGTILLSGISRPRSCRRFPTLPSVLAVQQMQSLSLQAFIVASFYVGNQNRVQDSIIGFDIKVVRNEEFNNDVILKGRPLSYGLSVTFSDDILELAHQYVLFNIV
EVKPYIE