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HG10017680 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017680
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr03:18594369..18594758
RNA-Seq ExpressionHG10017680
SyntenyHG10017680
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2605729.1 hypothetical protein PVAP13_4NG137255 [Panicum virgatum]7.6e-1945.45Show/hide
Query:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITNNN---HILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPW
        METK H+ R  VL+  + FPN  AV   GLSGGL LLW  DVT+ + +LS+S I + ++         RL GFYGEP+      SW  LR LR   + PW
Subjt:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITNNN---HILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPW

Query:  IVVGDFNETLQAYEKVRGREQ
        + VGDFNE L+A  +  G E+
Subjt:  IVVGDFNETLQAYEKVRGREQ

XP_016721798.1 uncharacterized protein LOC107933986 [Gossypium hirsutum]5.3e-2044.92Show/hide
Query:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKIT--NNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWI
        METK    R++ +Q    F NG  V   G  GGL+L W  +  I +++ S  HI + I   +N +  R  GFYG P+ ++K  SW LLR+L+ MYSLPW 
Subjt:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKIT--NNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWI

Query:  VVGDFNETLQAYEKVRGR
        V GDFNE + AYEK+ GR
Subjt:  VVGDFNETLQAYEKVRGR

XP_024021734.1 uncharacterized protein LOC112091706 [Morus notabilis]7.6e-1940.32Show/hide
Query:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITNNNHI-LRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIV
        MET+      + ++    F  G  VDC G SGGL L+W  +V + + + S+SHI   +   + +  R  GFYG P  SD+H SWTLL RL+ + +LPW+V
Subjt:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITNNNHI-LRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIV

Query:  VGDFNETLQAYEKVRGREQYSPEL
         GDFNE L   +K  G  +Y P +
Subjt:  VGDFNETLQAYEKVRGREQYSPEL

XP_030930926.1 uncharacterized protein LOC115956768 [Quercus lobata]2.2e-1841.88Show/hide
Query:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKIT--NNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWI
        METK+   RI+++++ +   NG  + C+G SGGLALLW  +V +++   S +HI   IT  +NN   RL GFYG P+   ++ SW LL  L   + L W+
Subjt:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKIT--NNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWI

Query:  VVGDFNETLQAYEKVRG
         +GDFNE L   EK  G
Subjt:  VVGDFNETLQAYEKVRG

XP_038718208.1 uncharacterized protein LOC120011213 [Tripterygium wilfordii]7.6e-1943.59Show/hide
Query:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITNNNHIL--RLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWI
        +ETK H S+I  +++ +HF +G AVD +G  GGL LLW  +V I + + S  HIH++I   + +    L  FYG P+ S + FSW LLR L G    PW+
Subjt:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITNNNHIL--RLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWI

Query:  VVGDFNETLQAYEKVRG
         VGDFN      EKV G
Subjt:  VVGDFNETLQAYEKVRG

TrEMBL top hitse value%identityAlignment
A0A1U8M810 uncharacterized protein LOC1079339862.6e-2044.92Show/hide
Query:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKIT--NNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWI
        METK    R++ +Q    F NG  V   G  GGL+L W  +  I +++ S  HI + I   +N +  R  GFYG P+ ++K  SW LLR+L+ MYSLPW 
Subjt:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKIT--NNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWI

Query:  VVGDFNETLQAYEKVRGR
        V GDFNE + AYEK+ GR
Subjt:  VVGDFNETLQAYEKVRGR

A0A2N9HS57 Reverse transcriptase domain-containing protein7.0e-1842.02Show/hide
Query:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITNNN-HILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIV
        METK    R++V++  + F N   V  +G SGGLALLW  +  + +   S+ HI   + +   +  RL GFYG P+H  +  SW LL+ L GM  LPW  
Subjt:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITNNN-HILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIV

Query:  VGDFNETLQAYEKVRGREQ
        +GDFNE L+  EK  GRE+
Subjt:  VGDFNETLQAYEKVRGREQ

A0A484KD97 Endo/exonuclease/phosphatase domain-containing protein4.1e-1842.74Show/hide
Query:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITN-NNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIV
        METK  +   + L+  + F     VD VG SGGLA+LW ++ T  L + S+ H+ +++ + ++   RL GFYG P+   +HFSW LLR LR   SLPW+V
Subjt:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITN-NNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIV

Query:  VGDFNETLQAYEKVRGREQYSPEL
        +GDFN+   A EK RG E +   L
Subjt:  VGDFNETLQAYEKVRGREQYSPEL

A0A5B7BGF4 Endo/exonuclease/phosphatase domain-containing protein2.0e-1744.07Show/hide
Query:  ETKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKI-TNNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIVV
        ETKT+Q+R++ ++  + F NG  VD  G SGGL LLW     I L + SKSHI + +  N++    L GFYG P  S +  SW LLR LR    +PW+ +
Subjt:  ETKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKI-TNNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIVV

Query:  GDFNETLQAYEKVRGREQ
        GDFNE L   EK+  R +
Subjt:  GDFNETLQAYEKVRGREQ

A0A6J5XX33 Uncharacterized protein2.4e-1842.62Show/hide
Query:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKI-TNNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIV
        MET+  +++++  +       G +V  VGL GGL L+WTT   ++L + S  HIH+ + T++N+ L L GFYG P+  ++ FSW LLRRL      PW+V
Subjt:  METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKI-TNNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIV

Query:  VGDFNETLQAYEK--VRGREQY
        +GDFNE L A EK  +R R  Y
Subjt:  VGDFNETLQAYEK--VRGREQY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTAAGACTCATCAATCCAGAATTAAAGTGCTTCAAGATCATGTGCATTTTCCCAATGGTCCGGCTGTGGACTGTGTCGGGTTGAGTGGTGGTTTGGCTTTATT
ATGGACCACCGATGTCACCATTGATCTCTTCACACTCTCTAAATCACATATTCACATGAAAATTACTAACAATAACCATATCCTCCGTCTTAATGGGTTCTATGGCGAGC
CAAAACACTCTGATAAACACTTCTCATGGACTTTATTGAGAAGGTTACGTGGAATGTACTCACTCCCCTGGATTGTGGTAGGGGATTTTAATGAAACCCTTCAGGCTTAT
GAGAAAGTTAGAGGGCGTGAACAATACAGTCCTGAGTTGACAGTTCTTGACCACTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTAAGACTCATCAATCCAGAATTAAAGTGCTTCAAGATCATGTGCATTTTCCCAATGGTCCGGCTGTGGACTGTGTCGGGTTGAGTGGTGGTTTGGCTTTATT
ATGGACCACCGATGTCACCATTGATCTCTTCACACTCTCTAAATCACATATTCACATGAAAATTACTAACAATAACCATATCCTCCGTCTTAATGGGTTCTATGGCGAGC
CAAAACACTCTGATAAACACTTCTCATGGACTTTATTGAGAAGGTTACGTGGAATGTACTCACTCCCCTGGATTGTGGTAGGGGATTTTAATGAAACCCTTCAGGCTTAT
GAGAAAGTTAGAGGGCGTGAACAATACAGTCCTGAGTTGACAGTTCTTGACCACTTTTAA
Protein sequenceShow/hide protein sequence
METKTHQSRIKVLQDHVHFPNGPAVDCVGLSGGLALLWTTDVTIDLFTLSKSHIHMKITNNNHILRLNGFYGEPKHSDKHFSWTLLRRLRGMYSLPWIVVGDFNETLQAY
EKVRGREQYSPELTVLDHF