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HG10017688 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017688
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNase H domain-containing protein
Genome locationChr03:18916724..18916885
RNA-Seq ExpressionHG10017688
SyntenyHG10017688
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031982.1 hypothetical protein E6C27_scaffold134G00730 [Cucumis melo var. makuwa]2.1e-0760.42Show/hide
Query:  MDMACSPNALGIGYGAMIRNDRGEVVATQALCRLECLLVEAGEVIAIM
        +D+ACSPN  G GYG ++RND+GE+V  QA CR E  LVEAG+++AIM
Subjt:  MDMACSPNALGIGYGAMIRNDRGEVVATQALCRLECLLVEAGEVIAIM
TrEMBL top hitse value%identityAlignment
A0A5A7SLR6 RNase H domain-containing protein1.0e-0760.42Show/hide
Query:  MDMACSPNALGIGYGAMIRNDRGEVVATQALCRLECLLVEAGEVIAIM
        +D+ACSPN  G GYG ++RND+GE+V  QA CR E  LVEAG+++AIM
Subjt:  MDMACSPNALGIGYGAMIRNDRGEVVATQALCRLECLLVEAGEVIAIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGGCTTGCAGTCCGAATGCACTAGGCATCGGATACGGGGCGATGATTCGGAATGACAGAGGGGAGGTCGTTGCTACCCAAGCTCTATGTCGGTTGGAGTGTCT
GCTGGTGGAAGCTGGGGAAGTGATAGCTATCATGATGGTTTGCAGTTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATGGCTTGCAGTCCGAATGCACTAGGCATCGGATACGGGGCGATGATTCGGAATGACAGAGGGGAGGTCGTTGCTACCCAAGCTCTATGTCGGTTGGAGTGTCT
GCTGGTGGAAGCTGGGGAAGTGATAGCTATCATGATGGTTTGCAGTTGGTAG
Protein sequenceShow/hide protein sequence
MDMACSPNALGIGYGAMIRNDRGEVVATQALCRLECLLVEAGEVIAIMMVCSW