CuGenDBv2

Gene ID	HG10017691
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ABC transporter A family member 1
Genome location	Chr03:19202200..19208177
RNA-Seq Expression	HG10017691
Synteny	HG10017691
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK11077.1 ABC transporter A family member 1 isoform X7 [Cucumis melo var. makuwa]

1.0e-33

91.76

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Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL
        ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SL+ NGEYLAFAPDTVETKTMLHLMS+KFPLLE +
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL

XP_011653432.1 ABC transporter A family member 1 isoform X1 [Cucumis sativus]

3.6e-34

92.94

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Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL
        ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SLK NGEYLAFAPDTVETKTMLHLMS+KFPLLE +
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL

XP_031740232.1 ABC transporter A family member 1 isoform X2 [Cucumis sativus]

3.6e-34

92.94

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Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL
        ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SLK NGEYLAFAPDTVETKTMLHLMS+KFPLLE +
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL

XP_038881443.1 ABC transporter A family member 1 isoform X1 [Benincasa hispida]

8.0e-34

91.76

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Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL
        ILLPTVVM+LLIAVRTQVDNTVHPPQPHI+KGMFVEVGKGISPSFQEVLESLK +GEYLAFAPDTVETKTMLHLMSIKFPLL+ +
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL

XP_038881444.1 ABC transporter A family member 1 isoform X2 [Benincasa hispida]

8.0e-34

91.76

Show/hide

Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL
        ILLPTVVM+LLIAVRTQVDNTVHPPQPHI+KGMFVEVGKGISPSFQEVLESLK +GEYLAFAPDTVETKTMLHLMSIKFPLL+ +
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYE2 Uncharacterized protein

1.7e-34

92.94

Show/hide

Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL
        ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SLK NGEYLAFAPDTVETKTMLHLMS+KFPLLE +
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL

A0A1S3CCN6 ABC transporter A family member 1 isoform X1

8.6e-34

90.59

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Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL
        ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SL+ NGEYLAFAPDTVETKTMLHLMS+KFP+LE +
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL

A0A1S3CD80 ABC transporter A family member 1 isoform X7

8.6e-34

90.59

Show/hide

Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL
        ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SL+ NGEYLAFAPDTVETKTMLHLMS+KFP+LE +
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL

A0A5A7UJN7 ABC transporter A family member 1 isoform X7

8.6e-34

90.59

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Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL
        ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SL+ NGEYLAFAPDTVETKTMLHLMS+KFP+LE +
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL

A0A5D3CGH2 ABC transporter A family member 1 isoform X7

5.1e-34

91.76

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Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL
        ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SL+ NGEYLAFAPDTVETKTMLHLMS+KFPLLE +
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEAL

SwissProt top hits

e value

%identity

Alignment

Q84M24 ABC transporter A family member 1

8.9e-20

62.2

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Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLL
        ILLPT+VM+LLIAVRT+VD T+HP   +I K   VEVGKG SPSF EVL+ L   G++LAFAPDT ET  M+ ++S+KFP L
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLL

Arabidopsis top hits

e value

%identity

Alignment

AT2G41700.1 ATP-binding cassette A1

6.3e-21

62.2

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Query:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLL
        ILLPT+VM+LLIAVRT+VD T+HP   +I K   VEVGKG SPSF EVL+ L   G++LAFAPDT ET  M+ ++S+KFP L
Subjt:  ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLL

AT2G41700.2 ATP-binding cassette A1

2.4e-20

57.14

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Query:  WRICCLLMLLS-----ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLL
        +RI   ++LLS     ILLPT+VM+LLIAVRT+VD T+HP   +I K   VEVGKG SPSF EVL+ L   G++LAFAPDT ET  M+ ++S+KFP L
Subjt:  WRICCLLMLLS-----ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLL

Sequences

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CDS sequence

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ATGTTGACTCCAGAAGACGCTTCCTTGCCAACGGCAACTGCCTCCATTTTTGTTCTTCTCTTCTTCTCTCGCTGTCTTCTCCCTCCGTATGTCTCTGACTCTGCCTTTCC
GTCTTCTCTGAGAACCTCCGTCCATCCCTCGATCCACCGGAGATGGGACTTGCATGGAGGCAGCTCCAGGTTATGCTCCGCAAGAACTGGCTACTCAAAATTCGCCACCC
TTTTATCACCTCCGCAGAGGTTCTACTCTCTCTTCATCCTTTTACTTTCGCCGTCGCTTTACATGCTTGTTACTTTTCATCCCAATCTACTCGCTAGGGTTTTCTTGTTC
ACTGTGGATCTCATTCATGTATCAAGCGCCGCGGCGTCAAATTCCTGGAGAATTTGCTGTTTGTTGATGTTATTGAGTATTTTACTTCCGACTGTGGTGATGATGTTACT
GATAGCCGTAAGAACGCAAGTTGATAACACAGTCCATCCTCCGCAACCGCATATACAGAAAGGAATGTTTGTAGAAGTTGGCAAAGGTATATCCCCGAGTTTCCAAGAAG
TTCTGGAGTCACTGAAGAATAATGGAGAATATTTGGCTTTTGCACCAGATACAGTCGAGACGAAGACCATGCTACATTTGATGTCAATAAAATTTCCTCTTTTAGAGGCT
CTAGACCCTCCAAAGATTGTTCAAGCTTCACCGGAATTCATAAAGTTGGCTGCCGCTGGCCCTGAATCAAGCCACAGTTCGATGATGGTTGCTGAAAAGGAAGTCCTCGG
TTCCAACACAGAATCCTTTGGCATTCTTCCTACAAGACCTCAGCAGACCAAGGGTCTCGTTTCAATTTCAACCTTGGCAACTCCACGTGCTCTTACTATTGGGCATACTC
CTGTTGGGGAAGTAGTCTCGGCTAAGATCACCAATAATGAGCCTCCCTCTGCAATTAATGATGAGAGTATTTGTCTCTCTCCCAAATTAATTCAAGATTTGCTTGAGAAA
TGCTGTGTTAAGATTCAAATTCCTGAATTCAATCTTAAAAGGTCAGTAGATCCTTCTCCAAAGCCTTCCCCTTTCACACTTTTCGATTTTGCTTTCTCAGGATCATTTGT
TAATTTTGTGCGAGGAATTCCAAGCAATTCTTCTAATTCCTCTCGCCTCAATCAACAAGATTCTGATGTAGATTCTGTGGTAAGCGCAAGCAGTGAAGATCTGGAAGCTT
CTGAAACAGAGGAAGATTTGGAAGTTGAAAATGTTGAAGATTGTTTTGGTAAAGATTTGCATAATTTATTTCAACCTGAAGTTGGCCAGCTGCAAAGGATGTCTGAAGCT
TTCTCCTTCCCTCCACTCATTAGAGATGCAATTCCCCCAAACTTAATCTCTATAGTTGAAGACTGTGACATTGTCCTTGGTTGA

mRNA sequence

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Protein sequence

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MLTPEDASLPTATASIFVLLFFSRCLLPPYVSDSAFPSSLRTSVHPSIHRRWDLHGGSSRLCSARTGYSKFATLLSPPQRFYSLFILLLSPSLYMLVTFHPNLLARVFLF
TVDLIHVSSAAASNSWRICCLLMLLSILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEA
LDPPKIVQASPEFIKLAAAGPESSHSSMMVAEKEVLGSNTESFGILPTRPQQTKGLVSISTLATPRALTIGHTPVGEVVSAKITNNEPPSAINDESICLSPKLIQDLLEK
CCVKIQIPEFNLKRSVDPSPKPSPFTLFDFAFSGSFVNFVRGIPSNSSNSSRLNQQDSDVDSVVSASSEDLEASETEEDLEVENVEDCFGKDLHNLFQPEVGQLQRMSEA
FSFPPLIRDAIPPNLISIVEDCDIVLG

HG10017691 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome