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HG10017698 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017698
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein, putative
Genome locationChr03:19400767..19401135
RNA-Seq ExpressionHG10017698
SyntenyHG10017698
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3452192.1 hypothetical protein FNV43_RR08290 [Rhamnella rubrinervis]5.0e-2078.87Show/hide
Query:  FLLAGVFLYCCWYRLLDMLLLLLMLMDYLLDRTQKRLDLIGLASGGGSNEYSTASSQLRWMPHLHISSFSL
        FLLAGVFLYCCWYRLLDMLLLL  LMD+L +RT KR+ LIGLASGGGSNE+STASS+ RWM +L+ISSFS+
Subjt:  FLLAGVFLYCCWYRLLDMLLLLLMLMDYLLDRTQKRLDLIGLASGGGSNEYSTASSQLRWMPHLHISSFSL
KEH15337.1 transmembrane protein, putative [Medicago truncatula]9.8e-0889.47Show/hide
Query:  FLLAGVFLYCCWYRLLDMLLLLLMLMDYLLDRTQKRLD
        FLLAGVFLYCCWYRLLDMLLLLL+LMD+LLDRT KR+D
Subjt:  FLLAGVFLYCCWYRLLDMLLLLLMLMDYLLDRTQKRLD
TrEMBL top hitse value%identityAlignment
A0A072TD67 Transmembrane protein, putative4.7e-0889.47Show/hide
Query:  FLLAGVFLYCCWYRLLDMLLLLLMLMDYLLDRTQKRLD
        FLLAGVFLYCCWYRLLDMLLLLL+LMD+LLDRT KR+D
Subjt:  FLLAGVFLYCCWYRLLDMLLLLLMLMDYLLDRTQKRLD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGGATCTGTCTCTACATCTGGAATATCTGTCAGAGGATATGGAACTCAATATCGATCTGAAACATCGAAGGGGTGCTCTTGGTGCTATCTGTACTGCTCTCGT
TATCATCGGCAGATATGCTTTTCTATTAGCGGGGGTCTTTCTCTACTGCTGTTGGTATCGGCTTCTTGATATGCTTCTACTTTTACTGATGCTTATGGATTACTTGCTGG
ATCGAACCCAAAAACGTCTCGATTTGATCGGCCTGGCCTCGGGTGGTGGATCGAATGAATACTCAACTGCGTCATCACAGCTGCGATGGATGCCCCACCTTCATATCTCT
TCCTTCTCACTTCTCAATAAAGGCGGGGATGGACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTGGATCTGTCTCTACATCTGGAATATCTGTCAGAGGATATGGAACTCAATATCGATCTGAAACATCGAAGGGGTGCTCTTGGTGCTATCTGTACTGCTCTCGT
TATCATCGGCAGATATGCTTTTCTATTAGCGGGGGTCTTTCTCTACTGCTGTTGGTATCGGCTTCTTGATATGCTTCTACTTTTACTGATGCTTATGGATTACTTGCTGG
ATCGAACCCAAAAACGTCTCGATTTGATCGGCCTGGCCTCGGGTGGTGGATCGAATGAATACTCAACTGCGTCATCACAGCTGCGATGGATGCCCCACCTTCATATCTCT
TCCTTCTCACTTCTCAATAAAGGCGGGGATGGACTCTGA
Protein sequenceShow/hide protein sequence
MALDLSLHLEYLSEDMELNIDLKHRRGALGAICTALVIIGRYAFLLAGVFLYCCWYRLLDMLLLLLMLMDYLLDRTQKRLDLIGLASGGGSNEYSTASSQLRWMPHLHIS
SFSLLNKGGDGL